EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015633 (Gene tree)
Gene ID: 102218027
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 36641 bases
Position: chr14:12760131-12796771
Accession: 102218027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	1	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	2	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	3	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	4	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	5	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	6	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	7	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	8	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	9	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	10	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	11	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	12	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	13	14
ENSXMAP00000015693	KH_1	PF00013.29	2e-187	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015716	-	7383	XM_014470894	ENSXMAP00000015693	1268 (aa)	XP_014326380	M4AMJ9

Gene Model

Click here to download ENSXMAG00000015633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015633	hdlbpb	100	95.189	ENSAPOG00000006904	hdlbpb	100	95.189	Acanthochromis_polyacanthus
ENSXMAG00000015633	hdlbpb	100	90.031	ENSACIG00000016154	hdlbpb	100	90.031	Amphilophus_citrinellus
ENSXMAG00000015633	hdlbpb	100	95.820	ENSAOCG00000004083	hdlbpb	100	95.820	Amphiprion_ocellaris
ENSXMAG00000015633	hdlbpb	100	95.741	ENSAPEG00000012270	hdlbpb	100	95.741	Amphiprion_percula
ENSXMAG00000015633	hdlbpb	100	95.268	ENSATEG00000019877	hdlbpb	100	95.268	Anabas_testudineus
ENSXMAG00000015633	hdlbpb	100	82.019	ENSACAG00000003606	-	100	82.019	Anolis_carolinensis
ENSXMAG00000015633	hdlbpb	100	95.426	ENSACLG00000006618	hdlbpb	100	95.426	Astatotilapia_calliptera
ENSXMAG00000015633	hdlbpb	100	77.419	ENSAMXG00000019946	hdlbpb	100	77.419	Astyanax_mexicanus
ENSXMAG00000015633	hdlbpb	100	94.085	ENSCSEG00000000955	hdlbpb	100	94.085	Cynoglossus_semilaevis
ENSXMAG00000015633	hdlbpb	100	97.082	ENSCVAG00000005345	hdlbpb	100	97.082	Cyprinodon_variegatus
ENSXMAG00000015633	hdlbpb	99	84.925	ENSDARG00000061864	hdlbpb	99	84.925	Danio_rerio
ENSXMAG00000015633	hdlbpb	92	69.487	ENSEBUG00000005304	hdlbpb	96	69.316	Eptatretus_burgeri
ENSXMAG00000015633	hdlbpb	100	66.950	ENSELUG00000019925	hdlbpb	100	78.022	Esox_lucius
ENSXMAG00000015633	hdlbpb	87	34.768	ENSFHEG00000001701	hdlbpb	100	91.956	Fundulus_heteroclitus
ENSXMAG00000015633	hdlbpb	95	87.204	ENSGMOG00000004522	hdlbpb	78	87.204	Gadus_morhua
ENSXMAG00000015633	hdlbpb	100	98.975	ENSGAFG00000005278	hdlbpb	100	98.975	Gambusia_affinis
ENSXMAG00000015633	hdlbpb	99	91.002	ENSGACG00000019361	hdlbpb	100	91.239	Gasterosteus_aculeatus
ENSXMAG00000015633	hdlbpb	100	95.268	ENSHBUG00000018434	hdlbpb	100	95.268	Haplochromis_burtoni
ENSXMAG00000015633	hdlbpb	100	84.882	ENSIPUG00000003291	HDLBP	100	85.353	Ictalurus_punctatus
ENSXMAG00000015633	hdlbpb	100	95.978	ENSKMAG00000016562	hdlbpb	100	95.978	Kryptolebias_marmoratus
ENSXMAG00000015633	hdlbpb	100	94.479	ENSLBEG00000027855	hdlbpb	100	94.479	Labrus_bergylta
ENSXMAG00000015633	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	92	84.960	Latimeria_chalumnae
ENSXMAG00000015633	hdlbpb	100	82.506	ENSLOCG00000013909	hdlbpb	100	82.506	Lepisosteus_oculatus
ENSXMAG00000015633	hdlbpb	100	95.347	ENSMAMG00000003035	hdlbpb	100	95.347	Mastacembelus_armatus
ENSXMAG00000015633	hdlbpb	100	95.426	ENSMZEG00005021465	hdlbpb	100	95.426	Maylandia_zebra
ENSXMAG00000015633	hdlbpb	100	93.533	ENSMMOG00000012525	hdlbpb	100	93.849	Mola_mola
ENSXMAG00000015633	hdlbpb	100	92.744	ENSMALG00000008938	hdlbpb	100	92.744	Monopterus_albus
ENSXMAG00000015633	hdlbpb	100	95.505	ENSNBRG00000002236	hdlbpb	100	95.505	Neolamprologus_brichardi
ENSXMAG00000015633	hdlbpb	100	95.110	ENSONIG00000009211	hdlbpb	100	95.110	Oreochromis_niloticus
ENSXMAG00000015633	hdlbpb	100	94.243	ENSORLG00000006581	hdlbpb	100	94.243	Oryzias_latipes
ENSXMAG00000015633	hdlbpb	100	94.479	ENSORLG00020010012	hdlbpb	100	94.479	Oryzias_latipes_hni
ENSXMAG00000015633	hdlbpb	100	94.637	ENSORLG00015006863	hdlbpb	100	94.637	Oryzias_latipes_hsok
ENSXMAG00000015633	hdlbpb	100	94.637	ENSOMEG00000011131	hdlbpb	100	94.637	Oryzias_melastigma
ENSXMAG00000015633	hdlbpb	100	88.407	ENSPKIG00000005966	hdlbpb	100	88.486	Paramormyrops_kingsleyae
ENSXMAG00000015633	hdlbpb	86	93.889	ENSPMGG00000019853	hdlbpb	99	93.889	Periophthalmus_magnuspinnatus
ENSXMAG00000015633	hdlbpb	92	65.563	ENSPMAG00000000249	-	99	65.385	Petromyzon_marinus
ENSXMAG00000015633	hdlbpb	94	74.232	ENSPMAG00000002131	hdlbpb	100	74.232	Petromyzon_marinus
ENSXMAG00000015633	hdlbpb	100	97.504	ENSPFOG00000008755	hdlbpb	100	97.504	Poecilia_formosa
ENSXMAG00000015633	hdlbpb	100	98.580	ENSPLAG00000007055	hdlbpb	100	98.580	Poecilia_latipinna
ENSXMAG00000015633	hdlbpb	100	98.502	ENSPMEG00000001952	hdlbpb	100	98.502	Poecilia_mexicana
ENSXMAG00000015633	hdlbpb	100	98.659	ENSPREG00000012848	hdlbpb	100	98.659	Poecilia_reticulata
ENSXMAG00000015633	hdlbpb	100	95.268	ENSPNYG00000022467	hdlbpb	100	95.268	Pundamilia_nyererei
ENSXMAG00000015633	hdlbpb	100	87.224	ENSPNAG00000011104	hdlbpb	100	87.224	Pygocentrus_nattereri
ENSXMAG00000015633	hdlbpb	100	87.618	ENSSFOG00015023199	hdlbpb	100	87.618	Scleropages_formosus
ENSXMAG00000015633	hdlbpb	100	94.795	ENSSMAG00000008790	hdlbpb	100	94.795	Scophthalmus_maximus
ENSXMAG00000015633	hdlbpb	100	95.662	ENSSDUG00000020694	hdlbpb	100	95.662	Seriola_dumerili
ENSXMAG00000015633	hdlbpb	100	95.189	ENSSLDG00000020807	hdlbpb	100	95.189	Seriola_lalandi_dorsalis
ENSXMAG00000015633	hdlbpb	100	82.571	ENSSPUG00000018688	-	100	82.571	Sphenodon_punctatus
ENSXMAG00000015633	hdlbpb	100	95.820	ENSSPAG00000016969	hdlbpb	100	95.820	Stegastes_partitus
ENSXMAG00000015633	hdlbpb	98	91.449	ENSTRUG00000012888	hdlbpb	99	91.449	Takifugu_rubripes
ENSXMAG00000015633	hdlbpb	99	92.482	ENSTNIG00000002555	hdlbpb	100	92.482	Tetraodon_nigroviridis
ENSXMAG00000015633	hdlbpb	100	70.341	ENSXCOG00000001797	hdlbpb	100	86.002	Xiphophorus_couchianus