EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015655 (Gene tree)
Gene ID: 102232524
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1657 bases
Position: chr19:7562222-7563878
Accession: 102232524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015685	RRM_1	PF00076.22	7.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015708	-	303	XM_005797730	ENSXMAP00000015685	100 (aa)	XP_005797787	M4AMJ1

Gene Model

Click here to download ENSXMAG00000015655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015655	slirp	85	57.647	ENSG00000119705	SLIRP	92	62.857	Homo_sapiens
ENSXMAG00000015655	slirp	100	79.000	ENSAPOG00000001298	slirp	100	79.000	Acanthochromis_polyacanthus
ENSXMAG00000015655	slirp	68	57.353	ENSAMEG00000003975	SLIRP	75	57.353	Ailuropoda_melanoleuca
ENSXMAG00000015655	slirp	98	76.531	ENSACIG00000023083	slirp	97	76.531	Amphilophus_citrinellus
ENSXMAG00000015655	slirp	98	76.531	ENSAOCG00000006342	slirp	99	76.531	Amphiprion_ocellaris
ENSXMAG00000015655	slirp	98	76.531	ENSAPEG00000015917	slirp	99	76.531	Amphiprion_percula
ENSXMAG00000015655	slirp	97	76.289	ENSAPEG00000015719	-	99	76.289	Amphiprion_percula
ENSXMAG00000015655	slirp	100	70.000	ENSATEG00000013525	slirp	100	70.000	Anabas_testudineus
ENSXMAG00000015655	slirp	98	60.204	ENSAMXG00000018693	slirp	98	60.204	Astyanax_mexicanus
ENSXMAG00000015655	slirp	88	55.682	ENSCJAG00000016946	SLIRP	81	55.682	Callithrix_jacchus
ENSXMAG00000015655	slirp	91	52.688	ENSCAFG00020015876	-	84	52.688	Canis_lupus_dingo
ENSXMAG00000015655	slirp	88	53.409	ENSCCAG00000030130	SLIRP	81	53.409	Cebus_capucinus
ENSXMAG00000015655	slirp	88	53.409	ENSCATG00000036327	SLIRP	74	65.217	Cercocebus_atys
ENSXMAG00000015655	slirp	88	54.545	ENSCSAG00000011736	SLIRP	81	54.545	Chlorocebus_sabaeus
ENSXMAG00000015655	slirp	79	58.228	ENSCPBG00000026327	SLIRP	80	58.228	Chrysemys_picta_bellii
ENSXMAG00000015655	slirp	69	63.768	ENSCANG00000032892	SLIRP	70	63.768	Colobus_angolensis_palliatus
ENSXMAG00000015655	slirp	99	49.020	ENSCGRG00001024068	Slirp	92	49.020	Cricetulus_griseus_chok1gshd
ENSXMAG00000015655	slirp	99	49.020	ENSCGRG00000017440	Slirp	92	49.020	Cricetulus_griseus_crigri
ENSXMAG00000015655	slirp	94	58.947	ENSCSEG00000015766	slirp	97	58.947	Cynoglossus_semilaevis
ENSXMAG00000015655	slirp	79	88.608	ENSCVAG00000012504	slirp	78	88.608	Cyprinodon_variegatus
ENSXMAG00000015655	slirp	91	74.725	ENSDARG00000097753	slirp	91	74.468	Danio_rerio
ENSXMAG00000015655	slirp	88	48.315	ENSDNOG00000007721	SLIRP	81	48.315	Dasypus_novemcinctus
ENSXMAG00000015655	slirp	76	52.632	ENSDORG00000012379	Slirp	68	52.632	Dipodomys_ordii
ENSXMAG00000015655	slirp	89	50.562	ENSETEG00000010345	SLIRP	81	50.562	Echinops_telfairi
ENSXMAG00000015655	slirp	88	53.333	ENSEASG00005020193	SLIRP	81	53.333	Equus_asinus_asinus
ENSXMAG00000015655	slirp	98	50.505	ENSEEUG00000007257	SLIRP	98	50.505	Erinaceus_europaeus
ENSXMAG00000015655	slirp	96	70.833	ENSELUG00000016800	slirp	95	70.833	Esox_lucius
ENSXMAG00000015655	slirp	76	53.947	ENSFCAG00000036326	SLIRP	78	53.947	Felis_catus
ENSXMAG00000015655	slirp	78	58.974	ENSFALG00000012583	SLIRP	85	54.444	Ficedula_albicollis
ENSXMAG00000015655	slirp	87	48.276	ENSFDAG00000008347	SLIRP	77	48.276	Fukomys_damarensis
ENSXMAG00000015655	slirp	78	85.897	ENSFHEG00000004709	slirp	85	85.897	Fundulus_heteroclitus
ENSXMAG00000015655	slirp	97	70.103	ENSGMOG00000016948	slirp	93	70.103	Gadus_morhua
ENSXMAG00000015655	slirp	88	55.682	ENSGALG00000031238	SLIRP	85	55.682	Gallus_gallus
ENSXMAG00000015655	slirp	100	94.000	ENSGAFG00000010998	slirp	100	94.000	Gambusia_affinis
ENSXMAG00000015655	slirp	82	80.488	ENSGACG00000020137	slirp	95	80.488	Gasterosteus_aculeatus
ENSXMAG00000015655	slirp	98	58.586	ENSGAGG00000009953	SLIRP	68	58.586	Gopherus_agassizii
ENSXMAG00000015655	slirp	85	57.647	ENSGGOG00000011059	-	75	62.857	Gorilla_gorilla
ENSXMAG00000015655	slirp	88	46.667	ENSHGLG00000018491	SLIRP	81	46.667	Heterocephalus_glaber_female
ENSXMAG00000015655	slirp	88	46.667	ENSHGLG00100014153	SLIRP	81	46.667	Heterocephalus_glaber_male
ENSXMAG00000015655	slirp	96	79.167	ENSHCOG00000006795	slirp	97	79.167	Hippocampus_comes
ENSXMAG00000015655	slirp	98	73.469	ENSIPUG00000010214	SLIRP	98	73.469	Ictalurus_punctatus
ENSXMAG00000015655	slirp	89	49.451	ENSSTOG00000034316	SLIRP	82	49.451	Ictidomys_tridecemlineatus
ENSXMAG00000015655	slirp	100	70.000	ENSKMAG00000002038	slirp	96	70.000	Kryptolebias_marmoratus
ENSXMAG00000015655	slirp	100	70.000	ENSLBEG00000007564	slirp	100	70.000	Labrus_bergylta
ENSXMAG00000015655	slirp	96	69.792	ENSLACG00000013434	SLIRP	92	69.792	Latimeria_chalumnae
ENSXMAG00000015655	slirp	88	54.545	ENSMFAG00000042960	SLIRP	74	65.217	Macaca_fascicularis
ENSXMAG00000015655	slirp	84	59.524	ENSMMUG00000029256	SLIRP	74	65.217	Macaca_mulatta
ENSXMAG00000015655	slirp	88	54.545	ENSMNEG00000028921	SLIRP	74	65.217	Macaca_nemestrina
ENSXMAG00000015655	slirp	74	60.811	ENSMLEG00000043644	SLIRP	70	65.217	Mandrillus_leucophaeus
ENSXMAG00000015655	slirp	98	79.592	ENSMZEG00005004617	slirp	99	79.592	Maylandia_zebra
ENSXMAG00000015655	slirp	88	51.111	ENSMAUG00000003857	Slirp	81	51.111	Mesocricetus_auratus
ENSXMAG00000015655	slirp	89	53.333	ENSMICG00000012080	SLIRP	81	53.333	Microcebus_murinus
ENSXMAG00000015655	slirp	72	55.556	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSXMAG00000015655	slirp	100	76.000	ENSMMOG00000018268	slirp	100	76.000	Mola_mola
ENSXMAG00000015655	slirp	69	53.623	ENSMODG00000005207	-	97	53.623	Monodelphis_domestica
ENSXMAG00000015655	slirp	98	74.490	ENSMALG00000012581	slirp	100	74.490	Monopterus_albus
ENSXMAG00000015655	slirp	85	52.632	MGP_CAROLIEiJ_G0017995	Slirp	88	52.632	Mus_caroli
ENSXMAG00000015655	slirp	99	47.273	ENSMUSG00000021040	Slirp	98	47.273	Mus_musculus
ENSXMAG00000015655	slirp	99	47.273	MGP_SPRETEiJ_G0018840	Slirp	98	47.273	Mus_spretus
ENSXMAG00000015655	slirp	98	48.000	ENSMLUG00000029544	-	88	48.000	Myotis_lucifugus
ENSXMAG00000015655	slirp	87	49.438	ENSMLUG00000024998	-	88	47.000	Myotis_lucifugus
ENSXMAG00000015655	slirp	85	46.512	ENSNGAG00000016363	Slirp	83	46.512	Nannospalax_galili
ENSXMAG00000015655	slirp	89	50.562	ENSNLEG00000027238	-	79	59.420	Nomascus_leucogenys
ENSXMAG00000015655	slirp	89	50.562	ENSNLEG00000032459	-	75	58.571	Nomascus_leucogenys
ENSXMAG00000015655	slirp	88	52.222	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSXMAG00000015655	slirp	98	78.571	ENSONIG00000011692	slirp	99	78.571	Oreochromis_niloticus
ENSXMAG00000015655	slirp	89	53.846	ENSOANG00000022366	SLIRP	82	53.846	Ornithorhynchus_anatinus
ENSXMAG00000015655	slirp	100	77.000	ENSORLG00000010761	slirp	78	77.000	Oryzias_latipes
ENSXMAG00000015655	slirp	100	76.000	ENSORLG00020022188	slirp	100	76.000	Oryzias_latipes_hni
ENSXMAG00000015655	slirp	99	76.768	ENSORLG00015020171	slirp	98	76.768	Oryzias_latipes_hsok
ENSXMAG00000015655	slirp	100	77.000	ENSOMEG00000019321	slirp	100	77.000	Oryzias_melastigma
ENSXMAG00000015655	slirp	85	58.824	ENSPPAG00000040710	-	75	62.857	Pan_paniscus
ENSXMAG00000015655	slirp	70	57.143	ENSPPRG00000014350	SLIRP	71	57.143	Panthera_pardus
ENSXMAG00000015655	slirp	70	57.143	ENSPTIG00000014196	SLIRP	71	57.143	Panthera_tigris_altaica
ENSXMAG00000015655	slirp	85	57.647	ENSPTRG00000030691	SLIRP	75	62.857	Pan_troglodytes
ENSXMAG00000015655	slirp	88	54.545	ENSPANG00000026323	SLIRP	74	65.217	Papio_anubis
ENSXMAG00000015655	slirp	66	71.212	ENSPKIG00000008831	slirp	65	71.212	Paramormyrops_kingsleyae
ENSXMAG00000015655	slirp	79	78.481	ENSPMGG00000010541	slirp	91	78.481	Periophthalmus_magnuspinnatus
ENSXMAG00000015655	slirp	72	55.556	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSXMAG00000015655	slirp	85	51.765	ENSPMAG00000009355	slirp	94	51.765	Petromyzon_marinus
ENSXMAG00000015655	slirp	78	47.436	ENSPCIG00000026842	-	84	47.436	Phascolarctos_cinereus
ENSXMAG00000015655	slirp	99	92.929	ENSPFOG00000006758	slirp	99	92.929	Poecilia_formosa
ENSXMAG00000015655	slirp	99	93.939	ENSPLAG00000011140	slirp	99	93.939	Poecilia_latipinna
ENSXMAG00000015655	slirp	99	92.929	ENSPMEG00000019535	slirp	99	92.929	Poecilia_mexicana
ENSXMAG00000015655	slirp	99	92.929	ENSPREG00000011673	slirp	99	92.929	Poecilia_reticulata
ENSXMAG00000015655	slirp	74	59.459	ENSPPYG00000006030	SLIRP	69	58.667	Pongo_abelii
ENSXMAG00000015655	slirp	77	55.844	ENSPCOG00000015159	SLIRP	64	58.824	Propithecus_coquereli
ENSXMAG00000015655	slirp	98	71.429	ENSPNAG00000008633	slirp	99	71.429	Pygocentrus_nattereri
ENSXMAG00000015655	slirp	65	66.154	ENSRBIG00000031396	-	65	66.154	Rhinopithecus_bieti
ENSXMAG00000015655	slirp	74	56.757	ENSRBIG00000035817	-	68	56.757	Rhinopithecus_bieti
ENSXMAG00000015655	slirp	69	63.768	ENSRBIG00000032998	-	64	63.768	Rhinopithecus_bieti
ENSXMAG00000015655	slirp	88	59.091	ENSRBIG00000032222	-	81	59.091	Rhinopithecus_bieti
ENSXMAG00000015655	slirp	65	64.615	ENSRROG00000035604	-	65	64.615	Rhinopithecus_roxellana
ENSXMAG00000015655	slirp	88	59.091	ENSRROG00000036656	-	81	59.091	Rhinopithecus_roxellana
ENSXMAG00000015655	slirp	71	64.789	ENSRROG00000041312	-	70	64.789	Rhinopithecus_roxellana
ENSXMAG00000015655	slirp	67	65.672	ENSRROG00000017133	-	70	65.672	Rhinopithecus_roxellana
ENSXMAG00000015655	slirp	70	61.429	ENSSBOG00000020014	SLIRP	74	62.319	Saimiri_boliviensis_boliviensis
ENSXMAG00000015655	slirp	87	67.816	ENSSFOG00015011165	slirp	88	67.816	Scleropages_formosus
ENSXMAG00000015655	slirp	100	52.941	ENSSMAG00000012930	slirp	100	52.941	Scophthalmus_maximus
ENSXMAG00000015655	slirp	100	79.000	ENSSDUG00000021883	slirp	66	79.000	Seriola_dumerili
ENSXMAG00000015655	slirp	100	79.000	ENSSLDG00000023136	slirp	91	79.000	Seriola_lalandi_dorsalis
ENSXMAG00000015655	slirp	91	58.763	ENSSPUG00000009346	SLIRP	99	58.763	Sphenodon_punctatus
ENSXMAG00000015655	slirp	100	67.000	ENSSPAG00000013477	slirp	100	67.000	Stegastes_partitus
ENSXMAG00000015655	slirp	99	47.748	ENSSSCG00000028167	SLIRP	100	47.748	Sus_scrofa
ENSXMAG00000015655	slirp	78	57.692	ENSTGUG00000012337	SLIRP	87	51.087	Taeniopygia_guttata
ENSXMAG00000015655	slirp	98	66.667	ENSTRUG00000020127	slirp	98	66.667	Takifugu_rubripes
ENSXMAG00000015655	slirp	88	54.945	ENSUAMG00000022445	SLIRP	81	54.945	Ursus_americanus
ENSXMAG00000015655	slirp	88	53.846	ENSUMAG00000007166	SLIRP	81	53.846	Ursus_maritimus
ENSXMAG00000015655	slirp	89	49.438	ENSVPAG00000001781	SLIRP	81	49.438	Vicugna_pacos
ENSXMAG00000015655	slirp	89	52.174	ENSVVUG00000004436	SLIRP	82	52.174	Vulpes_vulpes
ENSXMAG00000015655	slirp	81	69.136	ENSXETG00000030343	SLIRP	91	69.136	Xenopus_tropicalis
ENSXMAG00000015655	slirp	100	98.000	ENSXCOG00000009422	slirp	100	98.000	Xiphophorus_couchianus