EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000015687 (Gene tree)
Gene ID
102226500
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
14996 bases
Position
chr14:12857151-12872146
Accession
102226500
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000038336RNA_pol_Rpb1_5PF04998.173.4e-10111
ENSXMAP00000015737RNA_pol_Rpb1_5PF04998.173.6e-10111
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30134
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30234
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30334
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30434
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30534
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30634
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30734
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30834
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-30934
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301034
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301134
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301234
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301334
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301434
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301534
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301634
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301734
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301834
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-301934
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302034
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302134
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302234
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302334
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302434
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302534
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302634
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302734
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302834
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-302934
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-303034
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-303134
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-303234
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-303334
ENSXMAP00000038336RNA_pol_Rpb1_RPF05001.132.2e-303434
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25134
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25234
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25334
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25434
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25534
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25634
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25734
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25834
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-25934
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251034
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251134
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251234
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251334
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251434
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251534
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251634
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251734
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251834
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-251934
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252034
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252134
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252234
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252334
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252434
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252534
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252634
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252734
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252834
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-252934
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-253034
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-253134
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-253234
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-253334
ENSXMAP00000015737RNA_pol_Rpb1_RPF05001.133.8e-253434
ENSXMAP00000038336RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSXMAP00000015737RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSXMAP00000038336RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSXMAP00000015737RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSXMAP00000038336RNA_pol_Rpb1_3PF04983.183.1e-5011
ENSXMAP00000015737RNA_pol_Rpb1_3PF04983.183.2e-5011
ENSXMAP00000038336RNA_pol_Rpb1_1PF04997.121.2e-10811
ENSXMAP00000015737RNA_pol_Rpb1_1PF04997.121.3e-10811
ENSXMAP00000038336RNA_pol_Rpb1_7PF04990.126.8e-5511
ENSXMAP00000015737RNA_pol_Rpb1_7PF04990.127e-5511
ENSXMAP00000038336RNA_pol_Rpb1_6PF04992.145.5e-6711
ENSXMAP00000015737RNA_pol_Rpb1_6PF04992.145.7e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000030647-5787-ENSXMAP000000383361928 (aa)--
ENSXMAT00000015760-8200XM_005804807ENSXMAP000000157371966 (aa)XP_005804864M4AMP3
Gene Model
Click here to download ENSXMAG00000015687's gene model file
Pathways
Pathway IDPathway NameSource
xma03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015687's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000015687polr2a8798.511ENSAPOG00000006552polr2a9098.511Acanthochromis_polyacanthus
ENSXMAG00000015687polr2a8294.176ENSAMEG00000016265-8294.183Ailuropoda_melanoleuca
ENSXMAG00000015687polr2a10098.755ENSACIG00000015982polr2a10098.755Amphilophus_citrinellus
ENSXMAG00000015687polr2a10096.661ENSAOCG00000004255polr2a10094.865Amphiprion_ocellaris
ENSXMAG00000015687polr2a10098.911ENSAPEG00000012623polr2a10098.911Amphiprion_percula
ENSXMAG00000015687polr2a10098.392ENSATEG00000019644polr2a10098.392Anabas_testudineus
ENSXMAG00000015687polr2a8294.658ENSACAG00000014561POLR2A8294.665Anolis_carolinensis
ENSXMAG00000015687polr2a8294.538ENSANAG00000020093-8294.667Aotus_nancymaae
ENSXMAG00000015687polr2a10098.185ENSACLG00000006735polr2a10098.185Astatotilapia_calliptera
ENSXMAG00000015687polr2a10097.770ENSAMXG00000020046polr2a10097.770Astyanax_mexicanus
ENSXMAG00000015687polr2a8294.538ENSBTAG00000046765POLR2A8294.544Bos_taurus
ENSXMAG00000015687polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSXMAG00000015687polr2a8694.475ENSCAFG00000016532POLR2A9994.482Canis_familiaris
ENSXMAG00000015687polr2a8293.610ENSCAFG00020007929-8293.618Canis_lupus_dingo
ENSXMAG00000015687polr2a8294.538ENSCHIG00000027173-8294.544Capra_hircus
ENSXMAG00000015687polr2a9292.179ENSTSYG00000012803-8591.832Carlito_syrichta
ENSXMAG00000015687polr2a9890.995ENSCAPG00000001882-10093.552Cavia_aperea
ENSXMAG00000015687polr2a9988.877ENSCPOG00000014812-10093.366Cavia_porcellus
ENSXMAG00000015687polr2a8294.538ENSCCAG00000020938-8294.667Cebus_capucinus
ENSXMAG00000015687polr2a8294.538ENSCATG00000013680-8294.544Cercocebus_atys
ENSXMAG00000015687polr2a8294.413ENSCLAG00000012196-8294.540Chinchilla_lanigera
ENSXMAG00000015687polr2a8285.750ENSCSAG00000011644-8285.767Chlorocebus_sabaeus
ENSXMAG00000015687polr2a9083.963ENSCPBG00000012697POLR2A9985.788Chrysemys_picta_bellii
ENSXMAG00000015687polr2a9876.610ENSCING00000007884-9977.166Ciona_intestinalis
ENSXMAG00000015687polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSXMAG00000015687polr2a8293.855ENSCANG00000010622-8293.862Colobus_angolensis_palliatus
ENSXMAG00000015687polr2a8189.383ENSCGRG00001003538Polr2a8587.103Cricetulus_griseus_chok1gshd
ENSXMAG00000015687polr2a8290.842ENSCGRG00000012105Polr2a9390.625Cricetulus_griseus_crigri
ENSXMAG00000015687polr2a9997.405ENSCSEG00000002635polr2a10097.405Cynoglossus_semilaevis
ENSXMAG00000015687polr2a10099.644ENSCVAG00000005156polr2a10099.644Cyprinodon_variegatus
ENSXMAG00000015687polr2a10097.458ENSDARG00000099966polr2a10097.458Danio_rerio
ENSXMAG00000015687polr2a8291.106ENSDNOG00000016482-8291.117Dasypus_novemcinctus
ENSXMAG00000015687polr2a8294.538ENSDORG00000008667Polr2a8294.667Dipodomys_ordii
ENSXMAG00000015687polr2a9970.042FBgn0003277RpII2159974.346Drosophila_melanogaster
ENSXMAG00000015687polr2a9490.325ENSETEG00000002540-8791.438Echinops_telfairi
ENSXMAG00000015687polr2a8287.211ENSEBUG00000013967polr2a8287.197Eptatretus_burgeri
ENSXMAG00000015687polr2a8292.551ENSEASG00005019114-8392.560Equus_asinus_asinus
ENSXMAG00000015687polr2a8294.538ENSECAG00000018485POLR2A8294.544Equus_caballus
ENSXMAG00000015687polr2a8594.393ENSEEUG00000001154-9594.393Erinaceus_europaeus
ENSXMAG00000015687polr2a8895.331ENSELUG00000014284polr2a8495.331Esox_lucius
ENSXMAG00000015687polr2a8294.475ENSFDAG00000008287-8294.482Fukomys_damarensis
ENSXMAG00000015687polr2a9999.217ENSFHEG00000001768polr2a10099.217Fundulus_heteroclitus
ENSXMAG00000015687polr2a9993.133ENSGMOG00000007725polr2a10093.160Gadus_morhua
ENSXMAG00000015687polr2a99100.000ENSGAFG00000005389polr2a10095.829Gambusia_affinis
ENSXMAG00000015687polr2a9993.954ENSGACG00000019366polr2a10093.731Gasterosteus_aculeatus
ENSXMAG00000015687polr2a8292.446ENSGGOG00000014800-9692.995Gorilla_gorilla
ENSXMAG00000015687polr2a9998.123ENSHBUG00000018937polr2a10098.111Haplochromis_burtoni
ENSXMAG00000015687polr2a8294.475ENSHGLG00000012381POLR2A8294.603Heterocephalus_glaber_female
ENSXMAG00000015687polr2a8294.475ENSHGLG00100014843POLR2A8294.603Heterocephalus_glaber_male
ENSXMAG00000015687polr2a10097.965ENSHCOG00000011874polr2a10097.965Hippocampus_comes
ENSXMAG00000015687polr2a10097.459ENSIPUG00000002613Polr2a10097.459Ictalurus_punctatus
ENSXMAG00000015687polr2a8294.538ENSSTOG00000001304-8294.667Ictidomys_tridecemlineatus
ENSXMAG00000015687polr2a8294.538ENSJJAG00000013049Polr2a8294.667Jaculus_jaculus
ENSXMAG00000015687polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSXMAG00000015687polr2a9998.339ENSLBEG00000027652polr2a10098.339Labrus_bergylta
ENSXMAG00000015687polr2a8085.326ENSLACG00000012071POLR2A8185.398Latimeria_chalumnae
ENSXMAG00000015687polr2a8997.227ENSLOCG00000013863polr2a9796.772Lepisosteus_oculatus
ENSXMAG00000015687polr2a9991.272ENSLAFG00000008626-9794.544Loxodonta_africana
ENSXMAG00000015687polr2a5193.258ENSMFAG00000007042-9993.258Macaca_fascicularis
ENSXMAG00000015687polr2a8294.538ENSMMUG00000023620-9194.544Macaca_mulatta
ENSXMAG00000015687polr2a8294.103ENSMNEG00000040407-8294.110Macaca_nemestrina
ENSXMAG00000015687polr2a8090.078ENSMLEG00000030263-9993.258Mandrillus_leucophaeus
ENSXMAG00000015687polr2a10098.423ENSMAMG00000003351polr2a10098.423Mastacembelus_armatus
ENSXMAG00000015687polr2a10098.169ENSMZEG00005021429polr2a10098.169Maylandia_zebra
ENSXMAG00000015687polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSXMAG00000015687polr2a8294.475ENSMICG00000013372-9893.654Microcebus_murinus
ENSXMAG00000015687polr2a9992.195ENSMOCG00000018279Polr2a10092.205Microtus_ochrogaster
ENSXMAG00000015687polr2a9097.395ENSMMOG00000012515polr2a9297.395Mola_mola
ENSXMAG00000015687polr2a8294.351ENSMODG00000007009-8294.358Monodelphis_domestica
ENSXMAG00000015687polr2a9395.105ENSMALG00000008716polr2a9998.094Monopterus_albus
ENSXMAG00000015687polr2a8294.538MGP_CAROLIEiJ_G0016587Polr2a8294.667Mus_caroli
ENSXMAG00000015687polr2a8294.538ENSMUSG00000005198Polr2a8294.667Mus_musculus
ENSXMAG00000015687polr2a8292.398MGP_PahariEiJ_G0017718Polr2a8292.407Mus_pahari
ENSXMAG00000015687polr2a8294.538MGP_SPRETEiJ_G0017423Polr2a8294.667Mus_spretus
ENSXMAG00000015687polr2a8294.413ENSMPUG00000009648-8294.420Mustela_putorius_furo
ENSXMAG00000015687polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSXMAG00000015687polr2a8294.538ENSNGAG00000002543Polr2a8294.667Nannospalax_galili
ENSXMAG00000015687polr2a10098.340ENSNBRG00000002005polr2a10098.340Neolamprologus_brichardi
ENSXMAG00000015687polr2a8194.660ENSNLEG00000009460-8294.667Nomascus_leucogenys
ENSXMAG00000015687polr2a9495.316ENSMEUG00000008611-9395.316Notamacropus_eugenii
ENSXMAG00000015687polr2a8094.251ENSOPRG00000015116-9994.251Ochotona_princeps
ENSXMAG00000015687polr2a8794.389ENSODEG00000017674-8590.012Octodon_degus
ENSXMAG00000015687polr2a10098.423ENSONIG00000009231polr2a10098.423Oreochromis_niloticus
ENSXMAG00000015687polr2a9990.460ENSOCUG00000017929-10094.420Oryctolagus_cuniculus
ENSXMAG00000015687polr2a10098.678ENSORLG00000006431polr2a10098.678Oryzias_latipes
ENSXMAG00000015687polr2a10098.678ENSORLG00020010235polr2a10098.678Oryzias_latipes_hni
ENSXMAG00000015687polr2a10098.576ENSORLG00015007075polr2a10098.576Oryzias_latipes_hsok
ENSXMAG00000015687polr2a9895.893ENSOMEG00000010713polr2a10098.320Oryzias_melastigma
ENSXMAG00000015687polr2a8294.538ENSOGAG00000033608-8294.544Otolemur_garnettii
ENSXMAG00000015687polr2a9194.538ENSOARG00000013874-10094.544Ovis_aries
ENSXMAG00000015687polr2a8194.562ENSPPAG00000043734-8990.215Pan_paniscus
ENSXMAG00000015687polr2a8194.660ENSPTRG00000008691POLR2A8294.667Pan_troglodytes
ENSXMAG00000015687polr2a8293.855ENSPANG00000024099-8293.968Papio_anubis
ENSXMAG00000015687polr2a7795.721ENSPKIG00000005727polr2a8595.564Paramormyrops_kingsleyae
ENSXMAG00000015687polr2a9892.770ENSPSIG00000014006POLR2A10092.689Pelodiscus_sinensis
ENSXMAG00000015687polr2a10097.506ENSPMGG00000019734polr2a10097.506Periophthalmus_magnuspinnatus
ENSXMAG00000015687polr2a8294.538ENSPEMG00000012521Polr2a8294.667Peromyscus_maniculatus_bairdii
ENSXMAG00000015687polr2a8694.355ENSPCIG00000028851-8294.355Phascolarctos_cinereus
ENSXMAG00000015687polr2a9999.894ENSPFOG00000007890polr2a9999.894Poecilia_formosa
ENSXMAG00000015687polr2a9999.894ENSPLAG00000007399polr2a9999.894Poecilia_latipinna
ENSXMAG00000015687polr2a10099.892ENSPMEG00000002071polr2a9999.894Poecilia_mexicana
ENSXMAG00000015687polr2a10099.847ENSPREG00000013122polr2a10099.847Poecilia_reticulata
ENSXMAG00000015687polr2a8294.538ENSPPYG00000007924-8294.544Pongo_abelii
ENSXMAG00000015687polr2a7494.737ENSPCAG00000006951-7494.737Procavia_capensis
ENSXMAG00000015687polr2a8194.660ENSPCOG00000025260-8294.667Propithecus_coquereli
ENSXMAG00000015687polr2a8294.227ENSPVAG00000005069-8294.234Pteropus_vampyrus
ENSXMAG00000015687polr2a10098.220ENSPNYG00000022340polr2a10098.220Pundamilia_nyererei
ENSXMAG00000015687polr2a10097.915ENSPNAG00000011237polr2a10097.915Pygocentrus_nattereri
ENSXMAG00000015687polr2a8294.475ENSRNOG00000028834Polr2a8294.482Rattus_norvegicus
ENSXMAG00000015687polr2a8294.165ENSRBIG00000002471-9194.172Rhinopithecus_bieti
ENSXMAG00000015687polr2a8294.538ENSRROG00000029583-8993.676Rhinopithecus_roxellana
ENSXMAG00000015687polr2a8250.877YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSXMAG00000015687polr2a8294.538ENSSBOG00000000808-8294.667Saimiri_boliviensis_boliviensis
ENSXMAG00000015687polr2a9394.351ENSSHAG00000002858-8494.358Sarcophilus_harrisii
ENSXMAG00000015687polr2a9997.720ENSSFOG00015023275polr2a10097.720Scleropages_formosus
ENSXMAG00000015687polr2a10095.829ENSSMAG00000009137polr2a10095.320Scophthalmus_maximus
ENSXMAG00000015687polr2a10098.548ENSSDUG00000020466polr2a10098.548Seriola_dumerili
ENSXMAG00000015687polr2a10098.496ENSSLDG00000020613polr2a10098.496Seriola_lalandi_dorsalis
ENSXMAG00000015687polr2a9590.132ENSSARG00000005875-9990.954Sorex_araneus
ENSXMAG00000015687polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSXMAG00000015687polr2a8293.606ENSSSCG00000028278-8293.614Sus_scrofa
ENSXMAG00000015687polr2a9892.250ENSTRUG00000012320polr2a8192.250Takifugu_rubripes
ENSXMAG00000015687polr2a9596.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSXMAG00000015687polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSXMAG00000015687polr2a8292.862ENSTTRG00000014273-8292.870Tursiops_truncatus
ENSXMAG00000015687polr2a9394.230ENSUAMG00000014866-10091.589Ursus_americanus
ENSXMAG00000015687polr2a7491.913ENSUMAG00000015732-8389.944Ursus_maritimus
ENSXMAG00000015687polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSXMAG00000015687polr2a8294.475ENSVVUG00000027878-8394.482Vulpes_vulpes
ENSXMAG00000015687polr2a8194.084ENSXETG00000012465polr2a8294.092Xenopus_tropicalis
ENSXMAG00000015687polr2a9699.268ENSXCOG00000001804polr2a10099.268Xiphophorus_couchianus

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