EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015709 (Gene tree)
Gene ID: 102219817
Gene Symbol: pcbp4
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 69484 bases
Position: chr20:5175232-5244715
Accession: 102219817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015748	KH_1	PF00013.29	1.8e-52	1	3
ENSXMAP00000015748	KH_1	PF00013.29	1.8e-52	2	3
ENSXMAP00000015748	KH_1	PF00013.29	1.8e-52	3	3
ENSXMAP00000015748	KH_2	PF07650.17	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015771	-	1866	XM_023325683	ENSXMAP00000015748	477 (aa)	XP_023181451	M4AMQ4

Gene Model

Click here to download ENSXMAG00000015709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015709	pcbp4	76	63.085	ENSG00000090097	PCBP4	92	79.221	Homo_sapiens
ENSXMAG00000015709	pcbp4	75	81.667	ENSAPOG00000009897	-	78	81.667	Acanthochromis_polyacanthus
ENSXMAG00000015709	pcbp4	54	96.129	ENSAPOG00000018462	-	69	96.129	Acanthochromis_polyacanthus
ENSXMAG00000015709	pcbp4	76	63.361	ENSAMEG00000009211	PCBP4	79	64.080	Ailuropoda_melanoleuca
ENSXMAG00000015709	pcbp4	72	95.253	ENSACIG00000015264	pcbp4	67	95.253	Amphilophus_citrinellus
ENSXMAG00000015709	pcbp4	72	82.515	ENSACIG00000020434	-	78	82.515	Amphilophus_citrinellus
ENSXMAG00000015709	pcbp4	75	76.602	ENSAOCG00000021366	-	79	76.602	Amphiprion_ocellaris
ENSXMAG00000015709	pcbp4	76	76.415	ENSAOCG00000006924	-	83	76.415	Amphiprion_ocellaris
ENSXMAG00000015709	pcbp4	55	84.375	ENSAPEG00000009555	-	76	84.375	Amphiprion_percula
ENSXMAG00000015709	pcbp4	72	94.099	ENSAPEG00000023157	pcbp4	77	94.099	Amphiprion_percula
ENSXMAG00000015709	pcbp4	67	83.386	ENSATEG00000008529	pcbp4	71	83.386	Anabas_testudineus
ENSXMAG00000015709	pcbp4	75	74.931	ENSATEG00000006511	-	80	74.931	Anabas_testudineus
ENSXMAG00000015709	pcbp4	78	62.533	ENSACAG00000011701	PCBP4	78	65.517	Anolis_carolinensis
ENSXMAG00000015709	pcbp4	76	63.085	ENSANAG00000023072	PCBP4	79	63.793	Aotus_nancymaae
ENSXMAG00000015709	pcbp4	79	91.864	ENSACLG00000013348	pcbp4	72	95.014	Astatotilapia_calliptera
ENSXMAG00000015709	pcbp4	75	82.778	ENSACLG00000025246	-	78	82.778	Astatotilapia_calliptera
ENSXMAG00000015709	pcbp4	79	86.016	ENSAMXG00000033125	pcbp4	77	88.089	Astyanax_mexicanus
ENSXMAG00000015709	pcbp4	76	62.810	ENSBTAG00000018622	PCBP4	89	61.920	Bos_taurus
ENSXMAG00000015709	pcbp4	76	63.085	ENSCJAG00000005783	PCBP4	79	63.793	Callithrix_jacchus
ENSXMAG00000015709	pcbp4	76	63.361	ENSCAFG00000010019	PCBP4	79	64.080	Canis_familiaris
ENSXMAG00000015709	pcbp4	76	63.361	ENSCAFG00020022361	PCBP4	79	64.080	Canis_lupus_dingo
ENSXMAG00000015709	pcbp4	76	62.810	ENSCHIG00000012918	PCBP4	79	63.506	Capra_hircus
ENSXMAG00000015709	pcbp4	76	63.361	ENSTSYG00000008765	PCBP4	79	64.080	Carlito_syrichta
ENSXMAG00000015709	pcbp4	76	62.810	ENSCAPG00000005895	PCBP4	79	63.506	Cavia_aperea
ENSXMAG00000015709	pcbp4	76	63.085	ENSCPOG00000014617	PCBP4	79	63.793	Cavia_porcellus
ENSXMAG00000015709	pcbp4	76	63.085	ENSCCAG00000033268	PCBP4	79	63.793	Cebus_capucinus
ENSXMAG00000015709	pcbp4	76	63.085	ENSCATG00000032034	PCBP4	79	63.793	Cercocebus_atys
ENSXMAG00000015709	pcbp4	76	63.085	ENSCLAG00000008356	PCBP4	79	63.793	Chinchilla_lanigera
ENSXMAG00000015709	pcbp4	76	63.085	ENSCSAG00000013913	PCBP4	79	63.793	Chlorocebus_sabaeus
ENSXMAG00000015709	pcbp4	76	64.770	ENSCPBG00000016554	PCBP4	78	65.230	Chrysemys_picta_bellii
ENSXMAG00000015709	pcbp4	76	63.085	ENSCANG00000038865	PCBP4	79	63.793	Colobus_angolensis_palliatus
ENSXMAG00000015709	pcbp4	76	63.361	ENSCGRG00001014953	Pcbp4	79	64.080	Cricetulus_griseus_chok1gshd
ENSXMAG00000015709	pcbp4	76	63.361	ENSCGRG00000008617	Pcbp4	79	64.080	Cricetulus_griseus_crigri
ENSXMAG00000015709	pcbp4	78	82.597	ENSCSEG00000014487	pcbp4	73	86.538	Cynoglossus_semilaevis
ENSXMAG00000015709	pcbp4	77	72.432	ENSCSEG00000021041	PCBP4	79	72.778	Cynoglossus_semilaevis
ENSXMAG00000015709	pcbp4	72	83.183	ENSCVAG00000003674	pcbp4	85	76.276	Cyprinodon_variegatus
ENSXMAG00000015709	pcbp4	77	80.759	ENSCVAG00000013090	-	78	81.894	Cyprinodon_variegatus
ENSXMAG00000015709	pcbp4	75	87.812	ENSDARG00000024276	pcbp4	95	76.923	Danio_rerio
ENSXMAG00000015709	pcbp4	71	77.778	ENSDNOG00000033951	PCBP4	68	77.778	Dasypus_novemcinctus
ENSXMAG00000015709	pcbp4	76	62.810	ENSDORG00000000573	Pcbp4	79	63.506	Dipodomys_ordii
ENSXMAG00000015709	pcbp4	61	57.508	ENSETEG00000001778	PCBP4	96	57.508	Echinops_telfairi
ENSXMAG00000015709	pcbp4	76	63.085	ENSEASG00005012889	PCBP4	79	63.793	Equus_asinus_asinus
ENSXMAG00000015709	pcbp4	76	63.085	ENSECAG00000024218	PCBP4	79	63.793	Equus_caballus
ENSXMAG00000015709	pcbp4	79	78.590	ENSELUG00000001870	-	78	81.319	Esox_lucius
ENSXMAG00000015709	pcbp4	75	85.833	ENSELUG00000018204	pcbp4	76	85.833	Esox_lucius
ENSXMAG00000015709	pcbp4	76	62.810	ENSFCAG00000009148	PCBP4	79	63.506	Felis_catus
ENSXMAG00000015709	pcbp4	76	62.712	ENSFALG00000008831	PCBP4	78	62.931	Ficedula_albicollis
ENSXMAG00000015709	pcbp4	76	63.085	ENSFDAG00000012692	PCBP4	100	54.822	Fukomys_damarensis
ENSXMAG00000015709	pcbp4	74	57.055	ENSFHEG00000002769	-	82	56.211	Fundulus_heteroclitus
ENSXMAG00000015709	pcbp4	79	75.726	ENSGMOG00000017799	-	80	77.994	Gadus_morhua
ENSXMAG00000015709	pcbp4	78	61.299	ENSGALG00000027695	PCBP4	77	61.494	Gallus_gallus
ENSXMAG00000015709	pcbp4	95	70.989	ENSGAFG00000021090	-	88	74.818	Gambusia_affinis
ENSXMAG00000015709	pcbp4	77	77.419	ENSGACG00000002664	-	80	79.006	Gasterosteus_aculeatus
ENSXMAG00000015709	pcbp4	76	64.228	ENSGAGG00000022116	PCBP4	76	66.092	Gopherus_agassizii
ENSXMAG00000015709	pcbp4	76	63.085	ENSGGOG00000012474	PCBP4	79	63.793	Gorilla_gorilla
ENSXMAG00000015709	pcbp4	79	92.126	ENSHBUG00000009472	pcbp4	72	95.291	Haplochromis_burtoni
ENSXMAG00000015709	pcbp4	75	82.778	ENSHBUG00000005329	-	78	82.778	Haplochromis_burtoni
ENSXMAG00000015709	pcbp4	76	63.361	ENSHGLG00000012018	PCBP4	79	64.080	Heterocephalus_glaber_female
ENSXMAG00000015709	pcbp4	76	61.202	ENSHGLG00100008748	PCBP4	79	61.823	Heterocephalus_glaber_male
ENSXMAG00000015709	pcbp4	78	75.202	ENSHCOG00000010838	-	72	84.524	Hippocampus_comes
ENSXMAG00000015709	pcbp4	79	84.960	ENSIPUG00000008212	pcbp4	78	87.258	Ictalurus_punctatus
ENSXMAG00000015709	pcbp4	76	61.157	ENSSTOG00000002573	PCBP4	89	65.015	Ictidomys_tridecemlineatus
ENSXMAG00000015709	pcbp4	76	63.361	ENSJJAG00000016235	Pcbp4	79	64.080	Jaculus_jaculus
ENSXMAG00000015709	pcbp4	79	92.084	ENSKMAG00000014252	pcbp4	74	94.722	Kryptolebias_marmoratus
ENSXMAG00000015709	pcbp4	78	80.811	ENSKMAG00000017554	-	99	67.868	Kryptolebias_marmoratus
ENSXMAG00000015709	pcbp4	78	81.892	ENSLBEG00000011345	-	78	82.500	Labrus_bergylta
ENSXMAG00000015709	pcbp4	80	67.016	ENSLACG00000015899	PCBP4	97	73.478	Latimeria_chalumnae
ENSXMAG00000015709	pcbp4	79	82.759	ENSLOCG00000013402	pcbp4	79	85.515	Lepisosteus_oculatus
ENSXMAG00000015709	pcbp4	75	60.725	ENSLAFG00000010732	PCBP4	80	61.709	Loxodonta_africana
ENSXMAG00000015709	pcbp4	76	63.085	ENSMFAG00000001431	PCBP4	79	63.793	Macaca_fascicularis
ENSXMAG00000015709	pcbp4	76	63.085	ENSMMUG00000022205	PCBP4	91	64.907	Macaca_mulatta
ENSXMAG00000015709	pcbp4	76	63.085	ENSMNEG00000028553	PCBP4	79	63.793	Macaca_nemestrina
ENSXMAG00000015709	pcbp4	76	63.085	ENSMLEG00000027083	PCBP4	79	63.793	Mandrillus_leucophaeus
ENSXMAG00000015709	pcbp4	78	81.892	ENSMAMG00000011364	-	78	82.500	Mastacembelus_armatus
ENSXMAG00000015709	pcbp4	79	89.583	ENSMAMG00000010163	pcbp4	72	93.352	Mastacembelus_armatus
ENSXMAG00000015709	pcbp4	79	91.864	ENSMZEG00005008852	pcbp4	72	95.014	Maylandia_zebra
ENSXMAG00000015709	pcbp4	75	82.778	ENSMZEG00005023631	-	78	82.778	Maylandia_zebra
ENSXMAG00000015709	pcbp4	52	75.269	ENSMGAG00000005091	-	85	75.269	Meleagris_gallopavo
ENSXMAG00000015709	pcbp4	76	63.361	ENSMAUG00000021064	Pcbp4	79	64.080	Mesocricetus_auratus
ENSXMAG00000015709	pcbp4	76	63.361	ENSMICG00000002686	PCBP4	79	64.080	Microcebus_murinus
ENSXMAG00000015709	pcbp4	76	63.361	ENSMOCG00000013557	Pcbp4	79	64.080	Microtus_ochrogaster
ENSXMAG00000015709	pcbp4	67	65.625	ENSMMOG00000017756	pcbp4	98	65.421	Mola_mola
ENSXMAG00000015709	pcbp4	77	75.339	ENSMMOG00000020533	-	80	75.766	Mola_mola
ENSXMAG00000015709	pcbp4	76	62.228	ENSMODG00000011790	PCBP4	66	63.506	Monodelphis_domestica
ENSXMAG00000015709	pcbp4	74	79.495	ENSMALG00000022117	-	77	80.782	Monopterus_albus
ENSXMAG00000015709	pcbp4	100	74.749	ENSMALG00000020318	pcbp4	76	93.629	Monopterus_albus
ENSXMAG00000015709	pcbp4	76	63.361	MGP_CAROLIEiJ_G0032623	Pcbp4	93	79.348	Mus_caroli
ENSXMAG00000015709	pcbp4	76	63.361	ENSMUSG00000023495	Pcbp4	91	81.481	Mus_musculus
ENSXMAG00000015709	pcbp4	76	63.361	MGP_PahariEiJ_G0015491	Pcbp4	93	79.348	Mus_pahari
ENSXMAG00000015709	pcbp4	76	63.361	MGP_SPRETEiJ_G0033768	-	93	79.348	Mus_spretus
ENSXMAG00000015709	pcbp4	76	62.810	ENSMPUG00000011766	PCBP4	79	63.506	Mustela_putorius_furo
ENSXMAG00000015709	pcbp4	78	62.803	ENSNGAG00000013148	Pcbp4	80	63.483	Nannospalax_galili
ENSXMAG00000015709	pcbp4	75	77.437	ENSNBRG00000015885	-	79	77.437	Neolamprologus_brichardi
ENSXMAG00000015709	pcbp4	72	75.731	ENSNBRG00000007475	pcbp4	89	75.731	Neolamprologus_brichardi
ENSXMAG00000015709	pcbp4	76	63.085	ENSNLEG00000007064	PCBP4	79	63.793	Nomascus_leucogenys
ENSXMAG00000015709	pcbp4	68	51.491	ENSMEUG00000006917	PCBP4	77	51.397	Notamacropus_eugenii
ENSXMAG00000015709	pcbp4	70	54.301	ENSOPRG00000008763	PCBP4	81	54.622	Ochotona_princeps
ENSXMAG00000015709	pcbp4	76	63.085	ENSODEG00000018230	PCBP4	79	63.793	Octodon_degus
ENSXMAG00000015709	pcbp4	80	59.173	ENSOANG00000014110	PCBP4	75	62.248	Ornithorhynchus_anatinus
ENSXMAG00000015709	pcbp4	76	63.361	ENSOCUG00000025336	PCBP4	79	64.080	Oryctolagus_cuniculus
ENSXMAG00000015709	pcbp4	79	87.335	ENSORLG00000003061	pcbp4	76	87.599	Oryzias_latipes
ENSXMAG00000015709	pcbp4	75	77.778	ENSORLG00000009899	-	80	77.778	Oryzias_latipes
ENSXMAG00000015709	pcbp4	75	81.667	ENSORLG00020001183	-	78	81.667	Oryzias_latipes_hni
ENSXMAG00000015709	pcbp4	75	82.222	ENSORLG00015017819	-	78	82.222	Oryzias_latipes_hsok
ENSXMAG00000015709	pcbp4	79	87.664	ENSORLG00015019262	pcbp4	72	90.251	Oryzias_latipes_hsok
ENSXMAG00000015709	pcbp4	79	84.433	ENSOMEG00000003516	-	77	84.433	Oryzias_melastigma
ENSXMAG00000015709	pcbp4	75	82.222	ENSOMEG00000011545	-	78	82.222	Oryzias_melastigma
ENSXMAG00000015709	pcbp4	76	63.361	ENSOGAG00000032384	PCBP4	79	64.080	Otolemur_garnettii
ENSXMAG00000015709	pcbp4	71	61.357	ENSOARG00000006603	PCBP4	81	62.037	Ovis_aries
ENSXMAG00000015709	pcbp4	76	62.534	ENSPPAG00000038764	PCBP4	79	63.218	Pan_paniscus
ENSXMAG00000015709	pcbp4	76	62.810	ENSPPRG00000006165	PCBP4	79	63.506	Panthera_pardus
ENSXMAG00000015709	pcbp4	76	62.810	ENSPTIG00000005401	PCBP4	76	63.506	Panthera_tigris_altaica
ENSXMAG00000015709	pcbp4	76	63.085	ENSPTRG00000014983	PCBP4	79	63.793	Pan_troglodytes
ENSXMAG00000015709	pcbp4	76	63.085	ENSPANG00000026222	PCBP4	79	63.793	Papio_anubis
ENSXMAG00000015709	pcbp4	77	76.630	ENSPKIG00000005487	-	79	76.944	Paramormyrops_kingsleyae
ENSXMAG00000015709	pcbp4	79	84.921	ENSPKIG00000010244	pcbp4	79	87.187	Paramormyrops_kingsleyae
ENSXMAG00000015709	pcbp4	69	74.595	ENSPSIG00000011286	PCBP4	96	58.537	Pelodiscus_sinensis
ENSXMAG00000015709	pcbp4	77	74.797	ENSPMGG00000022732	-	80	75.487	Periophthalmus_magnuspinnatus
ENSXMAG00000015709	pcbp4	75	86.471	ENSPMGG00000000063	pcbp4	76	87.462	Periophthalmus_magnuspinnatus
ENSXMAG00000015709	pcbp4	76	63.361	ENSPEMG00000009276	Pcbp4	79	64.080	Peromyscus_maniculatus_bairdii
ENSXMAG00000015709	pcbp4	76	62.772	ENSPCIG00000018151	PCBP4	75	64.080	Phascolarctos_cinereus
ENSXMAG00000015709	pcbp4	67	99.206	ENSPFOG00000014474	pcbp4	96	99.206	Poecilia_formosa
ENSXMAG00000015709	pcbp4	77	80.488	ENSPFOG00000002989	-	78	81.894	Poecilia_formosa
ENSXMAG00000015709	pcbp4	60	79.000	ENSPLAG00000011438	-	81	83.333	Poecilia_latipinna
ENSXMAG00000015709	pcbp4	71	93.525	ENSPLAG00000023316	pcbp4	64	93.525	Poecilia_latipinna
ENSXMAG00000015709	pcbp4	58	88.298	ENSPMEG00000012990	pcbp4	63	88.298	Poecilia_mexicana
ENSXMAG00000015709	pcbp4	77	72.087	ENSPREG00000017370	-	79	72.981	Poecilia_reticulata
ENSXMAG00000015709	pcbp4	53	100.000	ENSPREG00000021498	-	81	100.000	Poecilia_reticulata
ENSXMAG00000015709	pcbp4	76	63.085	ENSPPYG00000013822	PCBP4	79	63.793	Pongo_abelii
ENSXMAG00000015709	pcbp4	68	56.145	ENSPCAG00000009515	PCBP4	80	56.196	Procavia_capensis
ENSXMAG00000015709	pcbp4	76	63.361	ENSPCOG00000027535	PCBP4	79	64.080	Propithecus_coquereli
ENSXMAG00000015709	pcbp4	69	51.969	ENSPVAG00000012474	PCBP4	81	51.622	Pteropus_vampyrus
ENSXMAG00000015709	pcbp4	72	90.237	ENSPNYG00000019234	pcbp4	76	90.237	Pundamilia_nyererei
ENSXMAG00000015709	pcbp4	75	77.437	ENSPNYG00000003098	-	79	77.437	Pundamilia_nyererei
ENSXMAG00000015709	pcbp4	79	86.280	ENSPNAG00000025434	pcbp4	78	88.089	Pygocentrus_nattereri
ENSXMAG00000015709	pcbp4	76	63.361	ENSRNOG00000012406	Pcbp4	79	64.080	Rattus_norvegicus
ENSXMAG00000015709	pcbp4	76	63.085	ENSRBIG00000043793	PCBP4	79	63.793	Rhinopithecus_bieti
ENSXMAG00000015709	pcbp4	76	63.085	ENSRROG00000034589	PCBP4	79	63.793	Rhinopithecus_roxellana
ENSXMAG00000015709	pcbp4	76	63.085	ENSSBOG00000027029	PCBP4	79	63.793	Saimiri_boliviensis_boliviensis
ENSXMAG00000015709	pcbp4	70	62.977	ENSSHAG00000007362	PCBP4	100	62.977	Sarcophilus_harrisii
ENSXMAG00000015709	pcbp4	58	85.000	ENSSFOG00015008221	pcbp4	51	85.000	Scleropages_formosus
ENSXMAG00000015709	pcbp4	79	77.632	ENSSFOG00015012075	PCBP4	80	79.339	Scleropages_formosus
ENSXMAG00000015709	pcbp4	81	78.295	ENSSMAG00000009392	-	77	80.780	Scophthalmus_maximus
ENSXMAG00000015709	pcbp4	75	93.611	ENSSMAG00000005827	pcbp4	72	93.629	Scophthalmus_maximus
ENSXMAG00000015709	pcbp4	72	94.375	ENSSDUG00000017719	pcbp4	75	94.375	Seriola_dumerili
ENSXMAG00000015709	pcbp4	75	76.602	ENSSDUG00000015540	-	79	76.602	Seriola_dumerili
ENSXMAG00000015709	pcbp4	75	76.602	ENSSLDG00000007851	-	79	76.602	Seriola_lalandi_dorsalis
ENSXMAG00000015709	pcbp4	56	94.937	ENSSLDG00000024847	-	69	94.937	Seriola_lalandi_dorsalis
ENSXMAG00000015709	pcbp4	76	59.079	ENSSPUG00000000194	PCBP4	77	60.632	Sphenodon_punctatus
ENSXMAG00000015709	pcbp4	75	81.667	ENSSPAG00000003033	-	78	81.667	Stegastes_partitus
ENSXMAG00000015709	pcbp4	71	78.246	ENSSPAG00000019058	-	66	78.596	Stegastes_partitus
ENSXMAG00000015709	pcbp4	76	62.810	ENSSSCG00000028446	PCBP4	79	63.506	Sus_scrofa
ENSXMAG00000015709	pcbp4	68	56.707	ENSTGUG00000006393	PCBP4	96	57.622	Taeniopygia_guttata
ENSXMAG00000015709	pcbp4	77	76.152	ENSTRUG00000007426	-	79	76.602	Takifugu_rubripes
ENSXMAG00000015709	pcbp4	78	75.135	ENSTNIG00000017887	-	81	75.556	Tetraodon_nigroviridis
ENSXMAG00000015709	pcbp4	60	40.854	ENSTBEG00000015770	PCBP4	58	49.576	Tupaia_belangeri
ENSXMAG00000015709	pcbp4	51	58.772	ENSTTRG00000001443	PCBP4	66	61.224	Tursiops_truncatus
ENSXMAG00000015709	pcbp4	72	55.523	ENSUAMG00000020871	PCBP4	78	60.915	Ursus_americanus
ENSXMAG00000015709	pcbp4	76	63.636	ENSUMAG00000021609	PCBP4	79	64.368	Ursus_maritimus
ENSXMAG00000015709	pcbp4	76	63.361	ENSVVUG00000026857	PCBP4	79	64.080	Vulpes_vulpes
ENSXMAG00000015709	pcbp4	54	100.000	ENSXCOG00000017325	pcbp4	64	100.000	Xiphophorus_couchianus
ENSXMAG00000015709	pcbp4	74	70.068	ENSXCOG00000000111	-	94	65.217	Xiphophorus_couchianus
ENSXMAG00000015709	pcbp4	77	80.759	ENSXMAG00000024530	-	78	81.894	Xiphophorus_maculatus
ENSXMAG00000015709	pcbp4	63	92.359	ENSXMAG00000022188	-	66	92.359	Xiphophorus_maculatus