EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015898 (Gene tree)
Gene ID: 102231516
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 27935 bases
Position: chr9:24394302-24422236
Accession: 102231516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040792	ResIII	PF04851.15	2.9e-10	1	1
ENSXMAP00000015946	ResIII	PF04851.15	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036292	-	4207	XM_005804414	ENSXMAP00000040792	1013 (aa)	XP_005804471	UPI0003B642D6
ENSXMAT00000015970	-	2529	-	ENSXMAP00000015946	842 (aa)	-	M4ANA1

Gene Model

Click here to download ENSXMAG00000015898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015898	chd1l	96	60.545	ENSG00000131778	CHD1L	99	65.696	Homo_sapiens
ENSXMAG00000015898	chd1l	97	82.472	ENSAPOG00000001539	chd1l	99	84.180	Acanthochromis_polyacanthus
ENSXMAG00000015898	chd1l	96	60.900	ENSAMEG00000017063	CHD1L	97	64.376	Ailuropoda_melanoleuca
ENSXMAG00000015898	chd1l	96	76.941	ENSACIG00000001164	chd1l	99	81.849	Amphilophus_citrinellus
ENSXMAG00000015898	chd1l	100	81.890	ENSAOCG00000014510	chd1l	99	81.943	Amphiprion_ocellaris
ENSXMAG00000015898	chd1l	97	76.303	ENSAPEG00000017450	chd1l	95	81.965	Amphiprion_percula
ENSXMAG00000015898	chd1l	96	75.976	ENSAPEG00000017573	chd1l	95	81.871	Amphiprion_percula
ENSXMAG00000015898	chd1l	100	80.235	ENSATEG00000013058	chd1l	99	80.333	Anabas_testudineus
ENSXMAG00000015898	chd1l	96	58.817	ENSAPLG00000009976	CHD1L	96	62.804	Anas_platyrhynchos
ENSXMAG00000015898	chd1l	96	57.457	ENSACAG00000017686	CHD1L	97	61.669	Anolis_carolinensis
ENSXMAG00000015898	chd1l	96	60.427	ENSANAG00000024347	CHD1L	97	64.302	Aotus_nancymaae
ENSXMAG00000015898	chd1l	94	81.618	ENSACLG00000019304	chd1l	96	81.693	Astatotilapia_calliptera
ENSXMAG00000015898	chd1l	100	61.259	ENSAMXG00000012367	chd1l	99	61.259	Astyanax_mexicanus
ENSXMAG00000015898	chd1l	96	61.356	ENSBTAG00000020831	CHD1L	97	64.269	Bos_taurus
ENSXMAG00000015898	chd1l	96	60.000	ENSCJAG00000002406	CHD1L	97	64.384	Callithrix_jacchus
ENSXMAG00000015898	chd1l	96	58.629	ENSCAFG00000010944	CHD1L	97	61.224	Canis_familiaris
ENSXMAG00000015898	chd1l	98	59.884	ENSCAFG00020020121	CHD1L	98	63.247	Canis_lupus_dingo
ENSXMAG00000015898	chd1l	96	60.880	ENSCHIG00000013871	CHD1L	97	64.041	Capra_hircus
ENSXMAG00000015898	chd1l	96	60.166	ENSTSYG00000003005	CHD1L	99	64.554	Carlito_syrichta
ENSXMAG00000015898	chd1l	96	59.976	ENSCPOG00000009000	CHD1L	98	62.018	Cavia_porcellus
ENSXMAG00000015898	chd1l	96	58.175	ENSCCAG00000036079	CHD1L	97	61.600	Cebus_capucinus
ENSXMAG00000015898	chd1l	96	60.427	ENSCATG00000031044	CHD1L	97	64.498	Cercocebus_atys
ENSXMAG00000015898	chd1l	96	60.592	ENSCLAG00000000880	CHD1L	98	64.505	Chinchilla_lanigera
ENSXMAG00000015898	chd1l	96	60.427	ENSCSAG00000018386	CHD1L	97	64.457	Chlorocebus_sabaeus
ENSXMAG00000015898	chd1l	96	62.604	ENSCPBG00000002600	CHD1L	98	65.407	Chrysemys_picta_bellii
ENSXMAG00000015898	chd1l	96	60.545	ENSCANG00000020239	CHD1L	97	63.543	Colobus_angolensis_palliatus
ENSXMAG00000015898	chd1l	97	60.567	ENSCGRG00001021624	Chd1l	98	64.679	Cricetulus_griseus_chok1gshd
ENSXMAG00000015898	chd1l	96	60.523	ENSCGRG00000007554	Chd1l	99	65.212	Cricetulus_griseus_crigri
ENSXMAG00000015898	chd1l	94	85.639	ENSCVAG00000002595	chd1l	97	85.639	Cyprinodon_variegatus
ENSXMAG00000015898	chd1l	99	68.133	ENSDARG00000015471	chd1l	99	68.719	Danio_rerio
ENSXMAG00000015898	chd1l	96	60.664	ENSDNOG00000019504	CHD1L	97	64.302	Dasypus_novemcinctus
ENSXMAG00000015898	chd1l	96	59.342	ENSDORG00000013555	Chd1l	98	62.034	Dipodomys_ordii
ENSXMAG00000015898	chd1l	86	55.950	ENSETEG00000008445	CHD1L	88	62.898	Echinops_telfairi
ENSXMAG00000015898	chd1l	68	76.087	ENSEBUG00000005791	chd1l	77	76.087	Eptatretus_burgeri
ENSXMAG00000015898	chd1l	97	60.211	ENSEASG00005007364	CHD1L	100	65.697	Equus_asinus_asinus
ENSXMAG00000015898	chd1l	97	60.211	ENSECAG00000008915	CHD1L	100	65.697	Equus_caballus
ENSXMAG00000015898	chd1l	100	59.266	ENSELUG00000016844	chd1l	99	59.749	Esox_lucius
ENSXMAG00000015898	chd1l	96	59.763	ENSFCAG00000007777	CHD1L	97	63.575	Felis_catus
ENSXMAG00000015898	chd1l	96	59.286	ENSFALG00000006087	CHD1L	96	63.073	Ficedula_albicollis
ENSXMAG00000015898	chd1l	96	60.545	ENSFDAG00000012431	CHD1L	99	65.187	Fukomys_damarensis
ENSXMAG00000015898	chd1l	99	87.388	ENSFHEG00000012420	chd1l	100	87.190	Fundulus_heteroclitus
ENSXMAG00000015898	chd1l	98	58.974	ENSGALG00000015038	CHD1L	96	62.959	Gallus_gallus
ENSXMAG00000015898	chd1l	100	96.275	ENSGAFG00000018198	chd1l	100	96.471	Gambusia_affinis
ENSXMAG00000015898	chd1l	59	78.016	ENSGACG00000014042	chd1l	98	84.344	Gasterosteus_aculeatus
ENSXMAG00000015898	chd1l	96	62.901	ENSGAGG00000014432	CHD1L	96	66.235	Gopherus_agassizii
ENSXMAG00000015898	chd1l	96	60.118	ENSGGOG00000001067	CHD1L	96	64.327	Gorilla_gorilla
ENSXMAG00000015898	chd1l	94	81.723	ENSHBUG00000007464	chd1l	98	81.714	Haplochromis_burtoni
ENSXMAG00000015898	chd1l	96	59.408	ENSHGLG00000008933	CHD1L	98	63.492	Heterocephalus_glaber_female
ENSXMAG00000015898	chd1l	96	58.740	ENSHGLG00100007155	CHD1L	100	62.688	Heterocephalus_glaber_male
ENSXMAG00000015898	chd1l	96	70.567	ENSHCOG00000012787	chd1l	94	73.963	Hippocampus_comes
ENSXMAG00000015898	chd1l	100	63.698	ENSIPUG00000022617	chd1l	99	64.494	Ictalurus_punctatus
ENSXMAG00000015898	chd1l	97	55.124	ENSSTOG00000007032	CHD1L	98	58.570	Ictidomys_tridecemlineatus
ENSXMAG00000015898	chd1l	100	79.744	ENSKMAG00000014358	chd1l	99	79.961	Kryptolebias_marmoratus
ENSXMAG00000015898	chd1l	100	79.065	ENSLBEG00000023845	chd1l	99	79.065	Labrus_bergylta
ENSXMAG00000015898	chd1l	99	57.659	ENSLACG00000006262	CHD1L	99	58.146	Latimeria_chalumnae
ENSXMAG00000015898	chd1l	100	68.468	ENSLOCG00000010574	chd1l	100	68.664	Lepisosteus_oculatus
ENSXMAG00000015898	chd1l	96	60.047	ENSLAFG00000018136	CHD1L	100	64.195	Loxodonta_africana
ENSXMAG00000015898	chd1l	96	60.142	ENSMFAG00000043562	CHD1L	99	65.417	Macaca_fascicularis
ENSXMAG00000015898	chd1l	96	60.427	ENSMMUG00000009024	CHD1L	97	64.612	Macaca_mulatta
ENSXMAG00000015898	chd1l	96	60.427	ENSMNEG00000039905	CHD1L	97	64.612	Macaca_nemestrina
ENSXMAG00000015898	chd1l	96	60.427	ENSMLEG00000030900	CHD1L	97	64.612	Mandrillus_leucophaeus
ENSXMAG00000015898	chd1l	100	80.255	ENSMAMG00000012822	chd1l	99	81.191	Mastacembelus_armatus
ENSXMAG00000015898	chd1l	94	81.618	ENSMZEG00005020830	chd1l	95	81.408	Maylandia_zebra
ENSXMAG00000015898	chd1l	98	58.693	ENSMGAG00000014304	CHD1L	99	63.097	Meleagris_gallopavo
ENSXMAG00000015898	chd1l	96	60.664	ENSMICG00000002497	CHD1L	96	65.212	Microcebus_murinus
ENSXMAG00000015898	chd1l	98	59.930	ENSMOCG00000006305	Chd1l	98	64.505	Microtus_ochrogaster
ENSXMAG00000015898	chd1l	97	70.258	ENSMMOG00000005964	chd1l	91	74.828	Mola_mola
ENSXMAG00000015898	chd1l	96	58.226	ENSMODG00000018717	CHD1L	99	62.220	Monodelphis_domestica
ENSXMAG00000015898	chd1l	100	80.354	ENSMALG00000014675	chd1l	99	80.471	Monopterus_albus
ENSXMAG00000015898	chd1l	98	59.746	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.859	Mus_caroli
ENSXMAG00000015898	chd1l	96	60.329	ENSMUSG00000028089	Chd1l	98	64.553	Mus_musculus
ENSXMAG00000015898	chd1l	97	59.884	MGP_PahariEiJ_G0026845	Chd1l	98	64.819	Mus_pahari
ENSXMAG00000015898	chd1l	96	60.023	MGP_SPRETEiJ_G0026347	Chd1l	98	64.706	Mus_spretus
ENSXMAG00000015898	chd1l	96	60.427	ENSMPUG00000000615	CHD1L	97	63.636	Mustela_putorius_furo
ENSXMAG00000015898	chd1l	96	59.155	ENSMLUG00000007573	CHD1L	97	62.626	Myotis_lucifugus
ENSXMAG00000015898	chd1l	96	56.890	ENSNGAG00000000908	Chd1l	98	61.406	Nannospalax_galili
ENSXMAG00000015898	chd1l	96	74.118	ENSNBRG00000006021	chd1l	95	79.429	Neolamprologus_brichardi
ENSXMAG00000015898	chd1l	96	59.597	ENSNLEG00000000179	CHD1L	97	63.543	Nomascus_leucogenys
ENSXMAG00000015898	chd1l	98	50.581	ENSOPRG00000006973	CHD1L	99	54.982	Ochotona_princeps
ENSXMAG00000015898	chd1l	96	55.491	ENSODEG00000002494	CHD1L	97	60.731	Octodon_degus
ENSXMAG00000015898	chd1l	100	80.822	ENSONIG00000003183	chd1l	99	80.626	Oreochromis_niloticus
ENSXMAG00000015898	chd1l	88	55.527	ENSOANG00000003068	CHD1L	93	62.371	Ornithorhynchus_anatinus
ENSXMAG00000015898	chd1l	96	58.304	ENSOCUG00000009336	CHD1L	96	60.943	Oryctolagus_cuniculus
ENSXMAG00000015898	chd1l	98	75.207	ENSORLG00000003673	chd1l	95	79.469	Oryzias_latipes
ENSXMAG00000015898	chd1l	96	76.442	ENSORLG00020005123	chd1l	99	78.286	Oryzias_latipes_hni
ENSXMAG00000015898	chd1l	96	76.236	ENSORLG00015001680	chd1l	98	79.378	Oryzias_latipes_hsok
ENSXMAG00000015898	chd1l	81	77.273	ENSOMEG00000006109	chd1l	96	77.273	Oryzias_melastigma
ENSXMAG00000015898	chd1l	96	60.142	ENSOGAG00000008775	CHD1L	96	64.531	Otolemur_garnettii
ENSXMAG00000015898	chd1l	96	60.880	ENSOARG00000020547	CHD1L	99	64.877	Ovis_aries
ENSXMAG00000015898	chd1l	96	60.382	ENSPPAG00000039193	CHD1L	99	65.375	Pan_paniscus
ENSXMAG00000015898	chd1l	97	60.211	ENSPPRG00000010258	CHD1L	97	64.027	Panthera_pardus
ENSXMAG00000015898	chd1l	96	60.427	ENSPTRG00000001220	CHD1L	96	64.862	Pan_troglodytes
ENSXMAG00000015898	chd1l	96	60.427	ENSPANG00000009170	CHD1L	97	64.612	Papio_anubis
ENSXMAG00000015898	chd1l	99	68.836	ENSPKIG00000022166	chd1l	99	69.132	Paramormyrops_kingsleyae
ENSXMAG00000015898	chd1l	96	62.130	ENSPSIG00000012595	CHD1L	96	64.948	Pelodiscus_sinensis
ENSXMAG00000015898	chd1l	98	58.219	ENSPEMG00000013528	Chd1l	98	63.300	Peromyscus_maniculatus_bairdii
ENSXMAG00000015898	chd1l	93	58.415	ENSPCIG00000030409	CHD1L	100	63.309	Phascolarctos_cinereus
ENSXMAG00000015898	chd1l	100	93.817	ENSPFOG00000015948	chd1l	100	93.916	Poecilia_formosa
ENSXMAG00000015898	chd1l	100	94.907	ENSPLAG00000015145	chd1l	100	95.005	Poecilia_latipinna
ENSXMAG00000015898	chd1l	94	94.334	ENSPMEG00000008720	chd1l	99	94.334	Poecilia_mexicana
ENSXMAG00000015898	chd1l	96	87.723	ENSPREG00000017885	chd1l	98	92.069	Poecilia_reticulata
ENSXMAG00000015898	chd1l	96	60.427	ENSPPYG00000000946	CHD1L	97	64.343	Pongo_abelii
ENSXMAG00000015898	chd1l	91	54.203	ENSPCAG00000005959	CHD1L	90	58.528	Procavia_capensis
ENSXMAG00000015898	chd1l	96	57.399	ENSPVAG00000006084	CHD1L	100	61.575	Pteropus_vampyrus
ENSXMAG00000015898	chd1l	98	75.229	ENSPNYG00000013001	chd1l	97	81.829	Pundamilia_nyererei
ENSXMAG00000015898	chd1l	100	67.473	ENSPNAG00000011881	chd1l	99	68.019	Pygocentrus_nattereri
ENSXMAG00000015898	chd1l	98	59.170	ENSRNOG00000017669	Chd1l	98	64.892	Rattus_norvegicus
ENSXMAG00000015898	chd1l	96	60.545	ENSRBIG00000041272	CHD1L	97	63.699	Rhinopithecus_bieti
ENSXMAG00000015898	chd1l	96	60.833	ENSRROG00000041354	CHD1L	96	64.369	Rhinopithecus_roxellana
ENSXMAG00000015898	chd1l	96	57.888	ENSSHAG00000017395	CHD1L	99	61.461	Sarcophilus_harrisii
ENSXMAG00000015898	chd1l	94	70.811	ENSSFOG00015003649	chd1l	98	71.857	Scleropages_formosus
ENSXMAG00000015898	chd1l	100	76.260	ENSSMAG00000019377	chd1l	99	75.872	Scophthalmus_maximus
ENSXMAG00000015898	chd1l	96	78.391	ENSSDUG00000019831	chd1l	95	82.172	Seriola_dumerili
ENSXMAG00000015898	chd1l	99	75.913	ENSSLDG00000012714	chd1l	95	82.706	Seriola_lalandi_dorsalis
ENSXMAG00000015898	chd1l	98	57.809	ENSSPUG00000016865	CHD1L	98	62.929	Sphenodon_punctatus
ENSXMAG00000015898	chd1l	94	81.875	ENSSPAG00000017653	chd1l	99	82.390	Stegastes_partitus
ENSXMAG00000015898	chd1l	96	58.294	ENSSSCG00000006701	CHD1L	98	61.975	Sus_scrofa
ENSXMAG00000015898	chd1l	96	59.048	ENSTGUG00000013392	-	99	63.261	Taeniopygia_guttata
ENSXMAG00000015898	chd1l	96	65.102	ENSTNIG00000004902	chd1l	99	68.581	Tetraodon_nigroviridis
ENSXMAG00000015898	chd1l	96	57.043	ENSTTRG00000011711	CHD1L	100	62.384	Tursiops_truncatus
ENSXMAG00000015898	chd1l	98	59.488	ENSUAMG00000021991	CHD1L	96	65.521	Ursus_americanus
ENSXMAG00000015898	chd1l	98	60.023	ENSUMAG00000009733	CHD1L	98	64.947	Ursus_maritimus
ENSXMAG00000015898	chd1l	96	60.308	ENSVVUG00000007316	CHD1L	92	64.103	Vulpes_vulpes
ENSXMAG00000015898	chd1l	96	93.661	ENSXCOG00000008336	chd1l	96	93.661	Xiphophorus_couchianus