EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016094 (Gene tree)
Gene ID: 102229005
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7163 bases
Position: chr3:18170504-18177666
Accession: 102229005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016142	MMR_HSR1	PF01926.23	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016166	-	3218	XM_005810270	ENSXMAP00000016142	200 (aa)	XP_005810327	M4ANU7

Gene Model

Click here to download ENSXMAG00000016094's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016094	-	100	92.500	ENSAPOG00000001040	-	100	92.500	Acanthochromis_polyacanthus
ENSXMAG00000016094	-	96	66.667	ENSACIG00000003157	-	95	66.667	Amphilophus_citrinellus
ENSXMAG00000016094	-	100	92.500	ENSAOCG00000015908	-	100	92.500	Amphiprion_ocellaris
ENSXMAG00000016094	-	100	92.500	ENSAPEG00000004121	-	100	92.500	Amphiprion_percula
ENSXMAG00000016094	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSXMAG00000016094	-	100	91.500	ENSACLG00000019643	-	100	91.500	Astatotilapia_calliptera
ENSXMAG00000016094	-	100	96.000	ENSCVAG00000022649	-	100	96.000	Cyprinodon_variegatus
ENSXMAG00000016094	-	86	72.674	ENSDARG00000103934	megf8	99	72.674	Danio_rerio
ENSXMAG00000016094	-	100	98.500	ENSGAFG00000014787	-	100	98.500	Gambusia_affinis
ENSXMAG00000016094	-	100	91.500	ENSHBUG00000003728	-	100	91.500	Haplochromis_burtoni
ENSXMAG00000016094	-	100	91.500	ENSMZEG00005015817	-	100	91.500	Maylandia_zebra
ENSXMAG00000016094	-	100	93.500	ENSMMOG00000003924	-	100	93.500	Mola_mola
ENSXMAG00000016094	-	100	92.500	ENSMALG00000020807	-	100	92.500	Monopterus_albus
ENSXMAG00000016094	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSXMAG00000016094	-	100	88.000	ENSORLG00000025395	-	100	88.000	Oryzias_latipes
ENSXMAG00000016094	-	100	88.000	ENSORLG00020009535	-	100	88.000	Oryzias_latipes_hni
ENSXMAG00000016094	-	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSXMAG00000016094	-	100	86.070	ENSPKIG00000014528	-	100	86.070	Paramormyrops_kingsleyae
ENSXMAG00000016094	-	100	98.000	ENSPFOG00000014418	-	100	98.000	Poecilia_formosa
ENSXMAG00000016094	-	100	98.000	ENSPLAG00000003181	-	100	98.000	Poecilia_latipinna
ENSXMAG00000016094	-	100	98.000	ENSPMEG00000022988	-	100	98.000	Poecilia_mexicana
ENSXMAG00000016094	-	100	98.000	ENSPMEG00000008020	-	100	98.000	Poecilia_mexicana
ENSXMAG00000016094	-	100	91.000	ENSPNYG00000004681	-	100	91.000	Pundamilia_nyererei
ENSXMAG00000016094	-	100	86.500	ENSSFOG00015021754	rab13	100	86.500	Scleropages_formosus
ENSXMAG00000016094	-	100	65.217	ENSSMAG00000002569	-	100	65.217	Scophthalmus_maximus
ENSXMAG00000016094	-	100	91.000	ENSSMAG00000016376	-	100	91.000	Scophthalmus_maximus
ENSXMAG00000016094	-	100	93.000	ENSSDUG00000006307	-	100	93.000	Seriola_dumerili
ENSXMAG00000016094	-	100	93.000	ENSSLDG00000015823	-	100	93.000	Seriola_lalandi_dorsalis
ENSXMAG00000016094	-	100	93.000	ENSSPAG00000022440	-	100	93.000	Stegastes_partitus
ENSXMAG00000016094	-	100	90.000	ENSTNIG00000018319	-	100	90.000	Tetraodon_nigroviridis