EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016175 (Gene tree)
Gene ID: 102216821
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6832 bases
Position: chr20:16651458-16658289
Accession: 102216821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016217	dsrm	PF00035.26	1.3e-48	1	4
ENSXMAP00000016217	dsrm	PF00035.26	1.3e-48	2	4
ENSXMAP00000016217	dsrm	PF00035.26	1.3e-48	3	4
ENSXMAP00000016217	dsrm	PF00035.26	1.3e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016241	-	2790	XM_005796909	ENSXMAP00000016217	695 (aa)	XP_005796966	M4AP22

Gene Model

Click here to download ENSXMAG00000016175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016175	stau1	96	73.777	ENSG00000124214	STAU1	99	73.777	Homo_sapiens
ENSXMAG00000016175	stau1	99	89.337	ENSAPOG00000017260	stau1	99	89.337	Acanthochromis_polyacanthus
ENSXMAG00000016175	stau1	100	68.848	ENSAMEG00000013681	STAU1	99	68.848	Ailuropoda_melanoleuca
ENSXMAG00000016175	stau1	99	86.599	ENSACIG00000015918	stau1	99	87.608	Amphilophus_citrinellus
ENSXMAG00000016175	stau1	99	90.058	ENSAOCG00000012224	stau1	99	90.058	Amphiprion_ocellaris
ENSXMAG00000016175	stau1	99	90.058	ENSAPEG00000012308	stau1	99	90.058	Amphiprion_percula
ENSXMAG00000016175	stau1	99	90.058	ENSATEG00000024600	stau1	100	89.955	Anabas_testudineus
ENSXMAG00000016175	stau1	100	70.833	ENSAPLG00000010527	STAU1	100	70.833	Anas_platyrhynchos
ENSXMAG00000016175	stau1	100	71.165	ENSACAG00000015909	STAU1	99	71.165	Anolis_carolinensis
ENSXMAG00000016175	stau1	96	72.727	ENSANAG00000032714	STAU1	99	72.727	Aotus_nancymaae
ENSXMAG00000016175	stau1	99	88.761	ENSACLG00000012270	stau1	99	88.761	Astatotilapia_calliptera
ENSXMAG00000016175	stau1	85	78.782	ENSAMXG00000016812	stau1	98	78.782	Astyanax_mexicanus
ENSXMAG00000016175	stau1	96	73.581	ENSBTAG00000000241	STAU1	99	73.581	Bos_taurus
ENSXMAG00000016175	stau1	96	73.581	ENSCJAG00000016233	STAU1	99	73.581	Callithrix_jacchus
ENSXMAG00000016175	stau1	96	73.190	ENSCAFG00000011347	STAU1	97	73.190	Canis_familiaris
ENSXMAG00000016175	stau1	96	69.534	ENSCAFG00020017123	STAU1	99	72.638	Canis_lupus_dingo
ENSXMAG00000016175	stau1	96	73.190	ENSCHIG00000001799	-	99	73.190	Capra_hircus
ENSXMAG00000016175	stau1	96	72.407	ENSTSYG00000036179	-	99	72.407	Carlito_syrichta
ENSXMAG00000016175	stau1	72	72.455	ENSCAPG00000017041	STAU1	99	72.255	Cavia_aperea
ENSXMAG00000016175	stau1	71	70.741	ENSCPOG00000005566	STAU1	99	70.741	Cavia_porcellus
ENSXMAG00000016175	stau1	96	72.727	ENSCCAG00000034339	STAU1	99	72.727	Cebus_capucinus
ENSXMAG00000016175	stau1	96	75.322	ENSCATG00000028474	STAU1	99	75.322	Cercocebus_atys
ENSXMAG00000016175	stau1	71	73.547	ENSCLAG00000006516	-	99	73.547	Chinchilla_lanigera
ENSXMAG00000016175	stau1	71	59.639	ENSCLAG00000002784	-	99	59.639	Chinchilla_lanigera
ENSXMAG00000016175	stau1	72	73.852	ENSCSAG00000014986	STAU1	99	73.852	Chlorocebus_sabaeus
ENSXMAG00000016175	stau1	96	73.828	ENSCHOG00000001511	STAU1	99	73.828	Choloepus_hoffmanni
ENSXMAG00000016175	stau1	100	71.733	ENSCPBG00000026741	STAU1	100	71.733	Chrysemys_picta_bellii
ENSXMAG00000016175	stau1	96	73.973	ENSCANG00000039220	STAU1	99	73.973	Colobus_angolensis_palliatus
ENSXMAG00000016175	stau1	71	69.339	ENSCGRG00001013453	Stau1	99	69.339	Cricetulus_griseus_chok1gshd
ENSXMAG00000016175	stau1	71	69.339	ENSCGRG00000007216	Stau1	99	69.339	Cricetulus_griseus_crigri
ENSXMAG00000016175	stau1	99	77.010	ENSCSEG00000000792	stau1	99	78.138	Cynoglossus_semilaevis
ENSXMAG00000016175	stau1	93	86.133	ENSCVAG00000005906	stau1	100	87.500	Cyprinodon_variegatus
ENSXMAG00000016175	stau1	100	77.905	ENSDARG00000044182	stau1	100	78.964	Danio_rerio
ENSXMAG00000016175	stau1	96	73.828	ENSDNOG00000014933	STAU1	97	73.633	Dasypus_novemcinctus
ENSXMAG00000016175	stau1	71	72.414	ENSDORG00000030220	Stau1	99	72.414	Dipodomys_ordii
ENSXMAG00000016175	stau1	63	76.490	ENSETEG00000018235	STAU1	88	76.490	Echinops_telfairi
ENSXMAG00000016175	stau1	96	73.114	ENSEASG00005023343	STAU1	99	73.114	Equus_asinus_asinus
ENSXMAG00000016175	stau1	96	73.973	ENSECAG00000012894	STAU1	99	73.973	Equus_caballus
ENSXMAG00000016175	stau1	56	78.173	ENSEEUG00000014344	STAU1	68	78.173	Erinaceus_europaeus
ENSXMAG00000016175	stau1	99	80.453	ENSELUG00000002529	stau1	99	81.931	Esox_lucius
ENSXMAG00000016175	stau1	96	73.973	ENSFCAG00000001447	STAU1	99	73.973	Felis_catus
ENSXMAG00000016175	stau1	100	72.063	ENSFALG00000012940	STAU1	100	72.063	Ficedula_albicollis
ENSXMAG00000016175	stau1	71	73.146	ENSFDAG00000014119	-	99	73.146	Fukomys_damarensis
ENSXMAG00000016175	stau1	72	55.489	ENSFDAG00000020837	-	99	53.493	Fukomys_damarensis
ENSXMAG00000016175	stau1	100	94.245	ENSFHEG00000013517	stau1	100	94.245	Fundulus_heteroclitus
ENSXMAG00000016175	stau1	100	70.629	ENSGMOG00000016850	stau1	100	70.629	Gadus_morhua
ENSXMAG00000016175	stau1	100	73.066	ENSGALG00000004736	STAU1	100	73.066	Gallus_gallus
ENSXMAG00000016175	stau1	100	98.561	ENSGAFG00000010437	stau1	100	98.561	Gambusia_affinis
ENSXMAG00000016175	stau1	99	86.906	ENSGACG00000001352	stau1	99	86.906	Gasterosteus_aculeatus
ENSXMAG00000016175	stau1	100	72.493	ENSGAGG00000009825	STAU1	100	72.493	Gopherus_agassizii
ENSXMAG00000016175	stau1	96	68.269	ENSGGOG00000025351	STAU1	99	76.923	Gorilla_gorilla
ENSXMAG00000016175	stau1	99	88.617	ENSHBUG00000023668	stau1	99	88.617	Haplochromis_burtoni
ENSXMAG00000016175	stau1	71	74.037	ENSHGLG00000008730	STAU1	99	74.037	Heterocephalus_glaber_female
ENSXMAG00000016175	stau1	71	74.037	ENSHGLG00100000098	STAU1	99	74.037	Heterocephalus_glaber_male
ENSXMAG00000016175	stau1	99	82.040	ENSHCOG00000018461	stau1	99	82.040	Hippocampus_comes
ENSXMAG00000016175	stau1	99	73.988	ENSIPUG00000023725	stau1	99	73.988	Ictalurus_punctatus
ENSXMAG00000016175	stau1	71	73.428	ENSSTOG00000003634	STAU1	99	73.428	Ictidomys_tridecemlineatus
ENSXMAG00000016175	stau1	71	72.617	ENSJJAG00000020032	Stau1	99	72.617	Jaculus_jaculus
ENSXMAG00000016175	stau1	99	85.509	ENSKMAG00000007135	stau1	99	86.083	Kryptolebias_marmoratus
ENSXMAG00000016175	stau1	100	87.482	ENSLBEG00000020172	stau1	99	87.608	Labrus_bergylta
ENSXMAG00000016175	stau1	98	73.027	ENSLACG00000016157	STAU1	97	73.027	Latimeria_chalumnae
ENSXMAG00000016175	stau1	100	75.144	ENSLOCG00000003134	stau1	100	75.862	Lepisosteus_oculatus
ENSXMAG00000016175	stau1	73	74.168	ENSLAFG00000003238	STAU1	99	74.168	Loxodonta_africana
ENSXMAG00000016175	stau1	96	75.322	ENSMFAG00000040931	STAU1	99	77.037	Macaca_fascicularis
ENSXMAG00000016175	stau1	96	68.269	ENSMMUG00000002302	STAU1	99	77.037	Macaca_mulatta
ENSXMAG00000016175	stau1	96	74.364	ENSMNEG00000033821	STAU1	99	74.364	Macaca_nemestrina
ENSXMAG00000016175	stau1	96	73.777	ENSMLEG00000031383	STAU1	99	73.777	Mandrillus_leucophaeus
ENSXMAG00000016175	stau1	99	89.481	ENSMAMG00000017586	stau1	100	89.655	Mastacembelus_armatus
ENSXMAG00000016175	stau1	99	88.761	ENSMZEG00005015605	stau1	99	88.761	Maylandia_zebra
ENSXMAG00000016175	stau1	100	70.972	ENSMGAG00000004719	STAU1	100	70.972	Meleagris_gallopavo
ENSXMAG00000016175	stau1	71	69.339	ENSMAUG00000013846	Stau1	99	69.339	Mesocricetus_auratus
ENSXMAG00000016175	stau1	96	72.534	ENSMICG00000001995	STAU1	99	72.534	Microcebus_murinus
ENSXMAG00000016175	stau1	71	69.940	ENSMOCG00000018743	Stau1	99	69.940	Microtus_ochrogaster
ENSXMAG00000016175	stau1	100	85.632	ENSMMOG00000015455	stau1	99	85.755	Mola_mola
ENSXMAG00000016175	stau1	96	72.337	ENSMODG00000016276	STAU1	99	72.337	Monodelphis_domestica
ENSXMAG00000016175	stau1	99	89.193	ENSMALG00000000045	stau1	99	89.193	Monopterus_albus
ENSXMAG00000016175	stau1	71	70.588	MGP_CAROLIEiJ_G0024699	Stau1	99	70.612	Mus_caroli
ENSXMAG00000016175	stau1	71	70.385	ENSMUSG00000039536	Stau1	99	70.408	Mus_musculus
ENSXMAG00000016175	stau1	71	69.980	MGP_PahariEiJ_G0026141	Stau1	99	69.980	Mus_pahari
ENSXMAG00000016175	stau1	71	70.385	MGP_SPRETEiJ_G0025619	Stau1	99	70.408	Mus_spretus
ENSXMAG00000016175	stau1	96	70.282	ENSMPUG00000017581	STAU1	99	70.282	Mustela_putorius_furo
ENSXMAG00000016175	stau1	96	72.568	ENSMLUG00000008407	STAU1	97	72.568	Myotis_lucifugus
ENSXMAG00000016175	stau1	71	71.944	ENSNGAG00000007108	Stau1	99	71.944	Nannospalax_galili
ENSXMAG00000016175	stau1	99	88.473	ENSNBRG00000017596	stau1	99	88.473	Neolamprologus_brichardi
ENSXMAG00000016175	stau1	96	73.777	ENSNLEG00000006955	STAU1	99	73.777	Nomascus_leucogenys
ENSXMAG00000016175	stau1	66	77.056	ENSMEUG00000003263	STAU1	80	77.056	Notamacropus_eugenii
ENSXMAG00000016175	stau1	93	68.450	ENSOPRG00000014569	STAU1	93	68.450	Ochotona_princeps
ENSXMAG00000016175	stau1	72	73.852	ENSODEG00000006523	STAU1	99	73.852	Octodon_degus
ENSXMAG00000016175	stau1	99	85.994	ENSONIG00000004152	stau1	98	85.994	Oreochromis_niloticus
ENSXMAG00000016175	stau1	100	70.763	ENSOANG00000006394	STAU1	100	70.763	Ornithorhynchus_anatinus
ENSXMAG00000016175	stau1	96	72.994	ENSOCUG00000006214	STAU1	99	72.994	Oryctolagus_cuniculus
ENSXMAG00000016175	stau1	100	85.345	ENSOMEG00000002388	stau1	100	85.345	Oryzias_melastigma
ENSXMAG00000016175	stau1	71	50.100	ENSOGAG00000028222	-	99	49.400	Otolemur_garnettii
ENSXMAG00000016175	stau1	96	73.581	ENSOGAG00000002127	STAU1	97	73.581	Otolemur_garnettii
ENSXMAG00000016175	stau1	96	73.190	ENSOARG00000012204	STAU1	97	73.190	Ovis_aries
ENSXMAG00000016175	stau1	96	68.269	ENSPPAG00000032023	STAU1	99	76.923	Pan_paniscus
ENSXMAG00000016175	stau1	96	73.973	ENSPPRG00000003436	STAU1	99	73.973	Panthera_pardus
ENSXMAG00000016175	stau1	96	73.973	ENSPTIG00000011768	STAU1	99	73.973	Panthera_tigris_altaica
ENSXMAG00000016175	stau1	96	68.269	ENSPTRG00000023130	STAU1	99	76.923	Pan_troglodytes
ENSXMAG00000016175	stau1	96	75.322	ENSPANG00000020560	STAU1	99	75.322	Papio_anubis
ENSXMAG00000016175	stau1	99	77.195	ENSPKIG00000024588	stau1	99	78.045	Paramormyrops_kingsleyae
ENSXMAG00000016175	stau1	100	72.636	ENSPSIG00000010731	STAU1	99	72.636	Pelodiscus_sinensis
ENSXMAG00000016175	stau1	100	83.811	ENSPMGG00000018553	stau1	100	83.811	Periophthalmus_magnuspinnatus
ENSXMAG00000016175	stau1	71	69.739	ENSPEMG00000022045	Stau1	99	69.739	Peromyscus_maniculatus_bairdii
ENSXMAG00000016175	stau1	99	70.170	ENSPCIG00000023269	STAU1	99	71.791	Phascolarctos_cinereus
ENSXMAG00000016175	stau1	100	97.126	ENSPFOG00000017253	stau1	100	97.126	Poecilia_formosa
ENSXMAG00000016175	stau1	58	93.284	ENSPLAG00000014829	stau1	97	93.590	Poecilia_latipinna
ENSXMAG00000016175	stau1	100	93.103	ENSPMEG00000007495	stau1	100	93.103	Poecilia_mexicana
ENSXMAG00000016175	stau1	100	97.701	ENSPREG00000003477	stau1	100	97.701	Poecilia_reticulata
ENSXMAG00000016175	stau1	96	73.386	ENSPPYG00000011111	STAU1	99	73.386	Pongo_abelii
ENSXMAG00000016175	stau1	69	66.806	ENSPCAG00000002459	STAU1	100	66.806	Procavia_capensis
ENSXMAG00000016175	stau1	96	73.190	ENSPCOG00000027746	STAU1	99	73.190	Propithecus_coquereli
ENSXMAG00000016175	stau1	62	77.815	ENSPVAG00000015019	STAU1	86	77.815	Pteropus_vampyrus
ENSXMAG00000016175	stau1	99	88.617	ENSPNYG00000014436	stau1	99	88.617	Pundamilia_nyererei
ENSXMAG00000016175	stau1	99	76.967	ENSPNAG00000011323	stau1	99	76.967	Pygocentrus_nattereri
ENSXMAG00000016175	stau1	71	69.539	ENSRNOG00000007781	Stau1	99	69.539	Rattus_norvegicus
ENSXMAG00000016175	stau1	72	73.307	ENSRBIG00000037345	STAU1	100	73.108	Rhinopithecus_bieti
ENSXMAG00000016175	stau1	96	74.364	ENSRROG00000039008	STAU1	99	74.364	Rhinopithecus_roxellana
ENSXMAG00000016175	stau1	96	72.727	ENSSBOG00000034448	STAU1	99	72.727	Saimiri_boliviensis_boliviensis
ENSXMAG00000016175	stau1	96	74.125	ENSSHAG00000009492	STAU1	99	72.189	Sarcophilus_harrisii
ENSXMAG00000016175	stau1	99	79.484	ENSSFOG00015021497	stau1	99	79.484	Scleropages_formosus
ENSXMAG00000016175	stau1	99	89.625	ENSSMAG00000017410	stau1	99	89.625	Scophthalmus_maximus
ENSXMAG00000016175	stau1	99	90.346	ENSSDUG00000019439	stau1	99	90.346	Seriola_dumerili
ENSXMAG00000016175	stau1	99	90.346	ENSSLDG00000025040	stau1	99	90.346	Seriola_lalandi_dorsalis
ENSXMAG00000016175	stau1	100	71.449	ENSSPUG00000017983	STAU1	99	71.556	Sphenodon_punctatus
ENSXMAG00000016175	stau1	99	90.202	ENSSPAG00000019275	stau1	99	90.202	Stegastes_partitus
ENSXMAG00000016175	stau1	96	74.168	ENSSSCG00000027444	STAU1	99	74.545	Sus_scrofa
ENSXMAG00000016175	stau1	100	69.668	ENSTGUG00000008784	STAU1	100	69.668	Taeniopygia_guttata
ENSXMAG00000016175	stau1	99	85.447	ENSTRUG00000005837	stau1	99	86.023	Takifugu_rubripes
ENSXMAG00000016175	stau1	97	84.844	ENSTNIG00000014732	stau1	99	84.844	Tetraodon_nigroviridis
ENSXMAG00000016175	stau1	96	63.477	ENSTBEG00000009404	STAU1	99	63.477	Tupaia_belangeri
ENSXMAG00000016175	stau1	66	73.593	ENSTTRG00000004285	STAU1	80	73.593	Tursiops_truncatus
ENSXMAG00000016175	stau1	72	72.441	ENSUAMG00000025449	STAU1	99	72.441	Ursus_americanus
ENSXMAG00000016175	stau1	54	69.792	ENSUMAG00000024475	STAU1	89	69.792	Ursus_maritimus
ENSXMAG00000016175	stau1	96	74.168	ENSVPAG00000001313	STAU1	99	74.168	Vicugna_pacos
ENSXMAG00000016175	stau1	96	69.534	ENSVVUG00000022325	STAU1	99	69.534	Vulpes_vulpes
ENSXMAG00000016175	stau1	96	71.045	ENSXETG00000001783	stau1	95	70.746	Xenopus_tropicalis
ENSXMAG00000016175	stau1	56	94.359	ENSXCOG00000008804	stau1	98	94.359	Xiphophorus_couchianus