EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016192 (Gene tree)
Gene ID: 102228690
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 96453 bases
Position: chr4:8117760-8214212
Accession: 102228690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016279	ResIII	PF04851.15	2.5e-06	1	1
ENSXMAP00000032183	ResIII	PF04851.15	2.6e-06	1	1
ENSXMAP00000039843	ResIII	PF04851.15	2.7e-06	1	1
ENSXMAP00000039843	BRK	PF07533.16	1.5e-32	1	2
ENSXMAP00000039843	BRK	PF07533.16	1.5e-32	2	2
ENSXMAP00000032183	BRK	PF07533.16	1.6e-32	1	2
ENSXMAP00000032183	BRK	PF07533.16	1.6e-32	2	2
ENSXMAP00000016279	BRK	PF07533.16	2.4e-32	1	2
ENSXMAP00000016279	BRK	PF07533.16	2.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041780	-	10097	XM_023332621	ENSXMAP00000032183	2505 (aa)	XP_023188389	UPI000C6EA43C
ENSXMAT00000029422	-	10344	XM_023332622	ENSXMAP00000039843	2443 (aa)	XP_023188390	UPI000C6CB25B
ENSXMAT00000016303	-	12039	XM_023332615	ENSXMAP00000016279	3004 (aa)	XP_023188383	M4AP84

Gene Model

Click here to download ENSXMAG00000016192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016192	chd9	96	70.640	ENSG00000177200	CHD9	97	69.215	Homo_sapiens
ENSXMAG00000016192	chd9	99	90.924	ENSAPOG00000023034	chd9	99	90.426	Acanthochromis_polyacanthus
ENSXMAG00000016192	chd9	98	68.888	ENSAMEG00000016232	CHD9	84	71.212	Ailuropoda_melanoleuca
ENSXMAG00000016192	chd9	99	84.726	ENSACIG00000004097	chd9	98	79.246	Amphilophus_citrinellus
ENSXMAG00000016192	chd9	99	91.251	ENSAOCG00000005487	chd9	99	90.704	Amphiprion_ocellaris
ENSXMAG00000016192	chd9	99	91.209	ENSAPEG00000009859	chd9	99	90.704	Amphiprion_percula
ENSXMAG00000016192	chd9	99	89.571	ENSATEG00000002748	chd9	97	85.116	Anabas_testudineus
ENSXMAG00000016192	chd9	99	70.024	ENSAPLG00000002826	CHD9	56	77.303	Anas_platyrhynchos
ENSXMAG00000016192	chd9	67	77.284	ENSACAG00000016150	CHD9	83	70.911	Anolis_carolinensis
ENSXMAG00000016192	chd9	97	61.141	ENSANAG00000015630	CHD9	93	68.531	Aotus_nancymaae
ENSXMAG00000016192	chd9	99	86.278	ENSACLG00000016899	chd9	99	80.013	Astatotilapia_calliptera
ENSXMAG00000016192	chd9	99	77.217	ENSAMXG00000005652	chd9	97	78.470	Astyanax_mexicanus
ENSXMAG00000016192	chd9	98	68.326	ENSBTAG00000002287	CHD9	84	70.625	Bos_taurus
ENSXMAG00000016192	chd9	99	68.722	ENSCJAG00000001573	CHD9	93	68.881	Callithrix_jacchus
ENSXMAG00000016192	chd9	67	76.217	ENSCAFG00000009699	CHD9	84	71.368	Canis_familiaris
ENSXMAG00000016192	chd9	67	76.217	ENSCAFG00020002879	CHD9	91	69.580	Canis_lupus_dingo
ENSXMAG00000016192	chd9	94	69.540	ENSTSYG00000007693	CHD9	91	69.231	Carlito_syrichta
ENSXMAG00000016192	chd9	73	62.040	ENSCAPG00000011604	CHD9	64	62.606	Cavia_aperea
ENSXMAG00000016192	chd9	67	71.168	ENSCPOG00000036544	CHD9	78	66.990	Cavia_porcellus
ENSXMAG00000016192	chd9	97	61.070	ENSCCAG00000036178	CHD9	93	69.474	Cebus_capucinus
ENSXMAG00000016192	chd9	67	76.034	ENSCATG00000036753	CHD9	91	68.966	Cercocebus_atys
ENSXMAG00000016192	chd9	98	68.391	ENSCLAG00000007137	CHD9	99	77.035	Chinchilla_lanigera
ENSXMAG00000016192	chd9	67	75.973	ENSCSAG00000005311	CHD9	84	70.551	Chlorocebus_sabaeus
ENSXMAG00000016192	chd9	70	91.406	ENSCHOG00000003935	CHD9	58	91.361	Choloepus_hoffmanni
ENSXMAG00000016192	chd9	90	82.027	ENSCPBG00000012459	CHD9	86	77.047	Chrysemys_picta_bellii
ENSXMAG00000016192	chd9	99	60.333	ENSCANG00000030349	CHD9	91	69.580	Colobus_angolensis_palliatus
ENSXMAG00000016192	chd9	99	68.942	ENSCGRG00001016150	Chd9	84	70.287	Cricetulus_griseus_chok1gshd
ENSXMAG00000016192	chd9	99	68.942	ENSCGRG00000012850	Chd9	99	77.323	Cricetulus_griseus_crigri
ENSXMAG00000016192	chd9	99	86.198	ENSCSEG00000009209	chd9	99	83.947	Cynoglossus_semilaevis
ENSXMAG00000016192	chd9	99	92.562	ENSCVAG00000016195	chd9	99	88.158	Cyprinodon_variegatus
ENSXMAG00000016192	chd9	99	76.480	ENSDARG00000074498	chd9	97	77.103	Danio_rerio
ENSXMAG00000016192	chd9	98	69.462	ENSDNOG00000006045	CHD9	97	70.906	Dasypus_novemcinctus
ENSXMAG00000016192	chd9	84	68.886	ENSDORG00000008523	-	96	70.494	Dipodomys_ordii
ENSXMAG00000016192	chd9	86	92.063	ENSETEG00000009565	CHD9	76	91.935	Echinops_telfairi
ENSXMAG00000016192	chd9	99	67.780	ENSEASG00005014832	CHD9	96	78.214	Equus_asinus_asinus
ENSXMAG00000016192	chd9	97	61.765	ENSECAG00000011505	CHD9	84	70.598	Equus_caballus
ENSXMAG00000016192	chd9	81	86.522	ENSEEUG00000014515	CHD9	72	84.530	Erinaceus_europaeus
ENSXMAG00000016192	chd9	96	78.695	ENSELUG00000006031	chd9	97	78.491	Esox_lucius
ENSXMAG00000016192	chd9	99	69.450	ENSFCAG00000022534	CHD9	91	69.930	Felis_catus
ENSXMAG00000016192	chd9	99	70.012	ENSFALG00000013276	CHD9	97	70.150	Ficedula_albicollis
ENSXMAG00000016192	chd9	99	60.202	ENSFDAG00000021037	CHD9	85	70.175	Fukomys_damarensis
ENSXMAG00000016192	chd9	99	94.411	ENSFHEG00000006068	chd9	99	93.486	Fundulus_heteroclitus
ENSXMAG00000016192	chd9	81	87.051	ENSGMOG00000006040	chd9	84	86.771	Gadus_morhua
ENSXMAG00000016192	chd9	93	72.547	ENSGALG00000039178	CHD9	80	72.277	Gallus_gallus
ENSXMAG00000016192	chd9	100	98.483	ENSGAFG00000010014	chd9	100	98.483	Gambusia_affinis
ENSXMAG00000016192	chd9	97	60.974	ENSGGOG00000014816	CHD9	93	69.231	Gorilla_gorilla
ENSXMAG00000016192	chd9	99	86.918	ENSHBUG00000023322	chd9	99	87.360	Haplochromis_burtoni
ENSXMAG00000016192	chd9	98	69.588	ENSHGLG00000014938	CHD9	96	80.143	Heterocephalus_glaber_female
ENSXMAG00000016192	chd9	96	83.178	ENSHCOG00000000937	chd9	97	82.575	Hippocampus_comes
ENSXMAG00000016192	chd9	99	77.691	ENSIPUG00000016448	chd9	96	78.450	Ictalurus_punctatus
ENSXMAG00000016192	chd9	94	69.854	ENSSTOG00000022273	CHD9	99	76.633	Ictidomys_tridecemlineatus
ENSXMAG00000016192	chd9	66	70.971	ENSJJAG00000015741	-	96	70.665	Jaculus_jaculus
ENSXMAG00000016192	chd9	96	91.546	ENSKMAG00000016784	chd9	99	90.273	Kryptolebias_marmoratus
ENSXMAG00000016192	chd9	96	89.792	ENSLBEG00000012077	chd9	96	89.674	Labrus_bergylta
ENSXMAG00000016192	chd9	96	67.559	ENSLACG00000005557	CHD9	79	66.889	Latimeria_chalumnae
ENSXMAG00000016192	chd9	99	75.764	ENSLOCG00000007225	chd9	98	75.863	Lepisosteus_oculatus
ENSXMAG00000016192	chd9	67	75.898	ENSLAFG00000015374	CHD9	84	70.042	Loxodonta_africana
ENSXMAG00000016192	chd9	96	69.837	ENSMFAG00000041354	CHD9	94	70.814	Macaca_fascicularis
ENSXMAG00000016192	chd9	67	76.095	ENSMMUG00000016310	CHD9	91	69.580	Macaca_mulatta
ENSXMAG00000016192	chd9	99	60.464	ENSMNEG00000031494	CHD9	85	72.207	Macaca_nemestrina
ENSXMAG00000016192	chd9	67	76.034	ENSMLEG00000043219	CHD9	91	69.580	Mandrillus_leucophaeus
ENSXMAG00000016192	chd9	99	89.283	ENSMAMG00000003909	chd9	97	84.295	Mastacembelus_armatus
ENSXMAG00000016192	chd9	99	89.286	ENSMZEG00005006581	chd9	99	89.085	Maylandia_zebra
ENSXMAG00000016192	chd9	99	65.463	ENSMGAG00000004642	CHD9	59	72.606	Meleagris_gallopavo
ENSXMAG00000016192	chd9	98	68.737	ENSMICG00000016679	CHD9	91	69.930	Microcebus_murinus
ENSXMAG00000016192	chd9	99	84.258	ENSMMOG00000016406	chd9	97	78.863	Mola_mola
ENSXMAG00000016192	chd9	88	75.635	ENSMODG00000013142	-	96	77.163	Monodelphis_domestica
ENSXMAG00000016192	chd9	99	86.401	ENSMALG00000013306	chd9	99	80.638	Monopterus_albus
ENSXMAG00000016192	chd9	95	69.754	MGP_CAROLIEiJ_G0031364	Chd9	79	69.563	Mus_caroli
ENSXMAG00000016192	chd9	95	70.021	ENSMUSG00000056608	Chd9	99	76.106	Mus_musculus
ENSXMAG00000016192	chd9	95	68.779	MGP_PahariEiJ_G0022964	Chd9	84	68.763	Mus_pahari
ENSXMAG00000016192	chd9	95	69.099	MGP_SPRETEiJ_G0032483	Chd9	79	69.593	Mus_spretus
ENSXMAG00000016192	chd9	98	68.620	ENSMPUG00000003285	CHD9	84	71.182	Mustela_putorius_furo
ENSXMAG00000016192	chd9	67	75.852	ENSMLUG00000004456	CHD9	84	70.034	Myotis_lucifugus
ENSXMAG00000016192	chd9	99	88.960	ENSNBRG00000009423	chd9	99	88.719	Neolamprologus_brichardi
ENSXMAG00000016192	chd9	86	72.341	ENSNLEG00000001026	CHD9	85	72.414	Nomascus_leucogenys
ENSXMAG00000016192	chd9	72	93.985	ENSMEUG00000008222	-	74	88.125	Notamacropus_eugenii
ENSXMAG00000016192	chd9	98	60.380	ENSODEG00000004466	CHD9	84	70.299	Octodon_degus
ENSXMAG00000016192	chd9	99	88.642	ENSONIG00000002816	chd9	98	88.365	Oreochromis_niloticus
ENSXMAG00000016192	chd9	67	77.325	ENSOANG00000013401	CHD9	79	71.429	Ornithorhynchus_anatinus
ENSXMAG00000016192	chd9	99	69.356	ENSOCUG00000001016	CHD9	96	69.290	Oryctolagus_cuniculus
ENSXMAG00000016192	chd9	96	88.809	ENSORLG00000013810	chd9	96	86.337	Oryzias_latipes
ENSXMAG00000016192	chd9	98	83.612	ENSORLG00020020665	chd9	97	78.999	Oryzias_latipes_hni
ENSXMAG00000016192	chd9	97	88.711	ENSORLG00015019126	chd9	96	89.026	Oryzias_latipes_hsok
ENSXMAG00000016192	chd9	55	91.096	ENSOMEG00000015978	chd9	99	79.162	Oryzias_melastigma
ENSXMAG00000016192	chd9	99	69.178	ENSOGAG00000002110	CHD9	79	70.606	Otolemur_garnettii
ENSXMAG00000016192	chd9	98	68.216	ENSOARG00000017664	CHD9	84	70.536	Ovis_aries
ENSXMAG00000016192	chd9	96	69.594	ENSPPAG00000039388	-	96	69.591	Pan_paniscus
ENSXMAG00000016192	chd9	99	69.450	ENSPPRG00000004801	CHD9	91	69.580	Panthera_pardus
ENSXMAG00000016192	chd9	99	68.310	ENSPTIG00000021854	CHD9	84	69.739	Panthera_tigris_altaica
ENSXMAG00000016192	chd9	97	61.061	ENSPTRG00000008113	CHD9	93	69.231	Pan_troglodytes
ENSXMAG00000016192	chd9	99	67.948	ENSPANG00000019307	CHD9	97	69.074	Papio_anubis
ENSXMAG00000016192	chd9	97	77.020	ENSPKIG00000021876	chd9	96	78.228	Paramormyrops_kingsleyae
ENSXMAG00000016192	chd9	98	71.131	ENSPKIG00000025401	-	98	63.587	Paramormyrops_kingsleyae
ENSXMAG00000016192	chd9	55	78.920	ENSPSIG00000008099	CHD9	71	78.277	Pelodiscus_sinensis
ENSXMAG00000016192	chd9	85	72.228	ENSPCIG00000017215	CHD9	91	76.913	Phascolarctos_cinereus
ENSXMAG00000016192	chd9	100	98.526	ENSPFOG00000015839	chd9	100	98.070	Poecilia_formosa
ENSXMAG00000016192	chd9	100	98.485	ENSPLAG00000011118	chd9	100	98.403	Poecilia_latipinna
ENSXMAG00000016192	chd9	100	95.661	ENSPMEG00000015106	chd9	99	94.309	Poecilia_mexicana
ENSXMAG00000016192	chd9	100	98.854	ENSPREG00000006473	chd9	100	98.370	Poecilia_reticulata
ENSXMAG00000016192	chd9	97	61.094	ENSPPYG00000007348	CHD9	85	70.389	Pongo_abelii
ENSXMAG00000016192	chd9	68	82.066	ENSPCAG00000007564	CHD9	74	81.878	Procavia_capensis
ENSXMAG00000016192	chd9	99	59.009	ENSPCOG00000028433	CHD9	91	68.881	Propithecus_coquereli
ENSXMAG00000016192	chd9	95	73.965	ENSPVAG00000015617	CHD9	81	73.806	Pteropus_vampyrus
ENSXMAG00000016192	chd9	99	89.085	ENSPNYG00000010947	chd9	99	88.363	Pundamilia_nyererei
ENSXMAG00000016192	chd9	96	78.808	ENSPNAG00000024141	chd9	97	78.195	Pygocentrus_nattereri
ENSXMAG00000016192	chd9	86	67.646	ENSRNOG00000049302	Chd9	94	56.089	Rattus_norvegicus
ENSXMAG00000016192	chd9	99	69.246	ENSRBIG00000035553	CHD9	95	70.719	Rhinopithecus_bieti
ENSXMAG00000016192	chd9	99	69.381	ENSRROG00000033278	CHD9	96	70.761	Rhinopithecus_roxellana
ENSXMAG00000016192	chd9	96	70.280	ENSSBOG00000030240	CHD9	93	68.881	Saimiri_boliviensis_boliviensis
ENSXMAG00000016192	chd9	99	69.475	ENSSHAG00000002719	CHD9	84	70.888	Sarcophilus_harrisii
ENSXMAG00000016192	chd9	96	78.411	ENSSFOG00015020209	chd9	97	77.727	Scleropages_formosus
ENSXMAG00000016192	chd9	98	73.988	ENSSFOG00015001327	chd9	96	74.109	Scleropages_formosus
ENSXMAG00000016192	chd9	96	90.347	ENSSMAG00000008953	chd9	97	90.388	Scophthalmus_maximus
ENSXMAG00000016192	chd9	99	89.799	ENSSDUG00000006139	chd9	99	89.520	Seriola_dumerili
ENSXMAG00000016192	chd9	99	90.402	ENSSLDG00000017818	chd9	99	90.125	Seriola_lalandi_dorsalis
ENSXMAG00000016192	chd9	70	77.435	ENSSARG00000010632	CHD9	55	77.307	Sorex_araneus
ENSXMAG00000016192	chd9	99	90.718	ENSSPAG00000021649	chd9	99	90.346	Stegastes_partitus
ENSXMAG00000016192	chd9	99	59.558	ENSSSCG00000033591	CHD9	61	75.650	Sus_scrofa
ENSXMAG00000016192	chd9	86	73.488	ENSTGUG00000007476	CHD9	86	73.120	Taeniopygia_guttata
ENSXMAG00000016192	chd9	99	85.043	ENSTRUG00000009125	chd9	99	78.138	Takifugu_rubripes
ENSXMAG00000016192	chd9	79	69.676	ENSTNIG00000003825	chd9	85	98.817	Tetraodon_nigroviridis
ENSXMAG00000016192	chd9	60	94.915	ENSTBEG00000016052	-	63	94.737	Tupaia_belangeri
ENSXMAG00000016192	chd9	86	71.349	ENSTTRG00000012674	CHD9	77	71.309	Tursiops_truncatus
ENSXMAG00000016192	chd9	78	66.909	ENSUAMG00000022706	CHD9	95	68.672	Ursus_americanus
ENSXMAG00000016192	chd9	77	86.102	ENSUMAG00000004043	CHD9	95	85.893	Ursus_maritimus
ENSXMAG00000016192	chd9	71	75.813	ENSVPAG00000001374	CHD9	81	69.844	Vicugna_pacos
ENSXMAG00000016192	chd9	67	76.156	ENSVVUG00000019435	CHD9	84	71.326	Vulpes_vulpes
ENSXMAG00000016192	chd9	96	69.092	ENSXETG00000000349	chd9	77	75.778	Xenopus_tropicalis
ENSXMAG00000016192	chd9	100	97.995	ENSXCOG00000012997	chd9	99	97.997	Xiphophorus_couchianus