EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016215 (Gene tree)
Gene ID: 102230311
Gene Symbol: polr3c
Alias: zgc:56348
Full Name: RNA polymerase III subunit C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8778 bases
Position: chr3:18277938-18286715
Accession: 102230311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016274	RNA_pol_Rpc82	PF05645.13	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016298	-	4600	XM_005810275	ENSXMAP00000016274	546 (aa)	XP_005810332	M4AP79

Gene Model

Click here to download ENSXMAG00000016215's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03020	RNA polymerase	KEGG
xma04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016215	polr3c	99	63.254	ENSG00000186141	POLR3C	99	62.909	Homo_sapiens
ENSXMAG00000016215	polr3c	100	85.897	ENSAPOG00000008722	polr3c	99	86.630	Acanthochromis_polyacanthus
ENSXMAG00000016215	polr3c	99	63.803	ENSAMEG00000017531	POLR3C	99	63.225	Ailuropoda_melanoleuca
ENSXMAG00000016215	polr3c	100	85.766	ENSACIG00000008064	polr3c	100	85.766	Amphilophus_citrinellus
ENSXMAG00000016215	polr3c	100	85.949	ENSAOCG00000011695	polr3c	99	87.226	Amphiprion_ocellaris
ENSXMAG00000016215	polr3c	100	85.949	ENSAPEG00000004426	polr3c	99	87.226	Amphiprion_percula
ENSXMAG00000016215	polr3c	100	83.883	ENSATEG00000023618	polr3c	92	83.883	Anabas_testudineus
ENSXMAG00000016215	polr3c	99	63.620	ENSANAG00000036434	POLR3C	99	63.273	Aotus_nancymaae
ENSXMAG00000016215	polr3c	100	85.165	ENSACLG00000019970	polr3c	99	85.165	Astatotilapia_calliptera
ENSXMAG00000016215	polr3c	100	73.309	ENSAMXG00000008273	polr3c	99	73.309	Astyanax_mexicanus
ENSXMAG00000016215	polr3c	99	64.351	ENSBTAG00000021637	POLR3C	99	63.818	Bos_taurus
ENSXMAG00000016215	polr3c	99	63.254	ENSCJAG00000002314	POLR3C	99	62.909	Callithrix_jacchus
ENSXMAG00000016215	polr3c	99	63.620	ENSCAFG00000011257	POLR3C	99	63.273	Canis_familiaris
ENSXMAG00000016215	polr3c	95	63.238	ENSCAFG00020020066	POLR3C	99	62.879	Canis_lupus_dingo
ENSXMAG00000016215	polr3c	99	64.168	ENSCHIG00000022431	POLR3C	99	63.636	Capra_hircus
ENSXMAG00000016215	polr3c	99	62.888	ENSTSYG00000002292	POLR3C	99	62.545	Carlito_syrichta
ENSXMAG00000016215	polr3c	95	50.191	ENSCAPG00000011559	POLR3C	100	49.715	Cavia_aperea
ENSXMAG00000016215	polr3c	99	62.888	ENSCPOG00000004654	POLR3C	99	62.545	Cavia_porcellus
ENSXMAG00000016215	polr3c	99	63.620	ENSCCAG00000027077	POLR3C	99	63.091	Cebus_capucinus
ENSXMAG00000016215	polr3c	99	63.071	ENSCATG00000040166	POLR3C	99	62.727	Cercocebus_atys
ENSXMAG00000016215	polr3c	88	73.878	ENSCLAG00000001652	POLR3C	99	73.878	Chinchilla_lanigera
ENSXMAG00000016215	polr3c	99	63.437	ENSCSAG00000001762	POLR3C	99	63.091	Chlorocebus_sabaeus
ENSXMAG00000016215	polr3c	99	61.243	ENSCHOG00000006911	POLR3C	99	60.909	Choloepus_hoffmanni
ENSXMAG00000016215	polr3c	99	65.027	ENSCPBG00000007883	POLR3C	99	64.260	Chrysemys_picta_bellii
ENSXMAG00000016215	polr3c	100	41.742	ENSCING00000007024	-	100	42.105	Ciona_intestinalis
ENSXMAG00000016215	polr3c	99	42.413	ENSCSAVG00000008586	-	99	42.413	Ciona_savignyi
ENSXMAG00000016215	polr3c	99	63.139	ENSCANG00000032538	POLR3C	99	62.795	Colobus_angolensis_palliatus
ENSXMAG00000016215	polr3c	99	63.553	ENSCGRG00001005471	Polr3c	99	63.206	Cricetulus_griseus_chok1gshd
ENSXMAG00000016215	polr3c	99	63.553	ENSCGRG00000016787	Polr3c	99	63.206	Cricetulus_griseus_crigri
ENSXMAG00000016215	polr3c	99	81.952	ENSCSEG00000002425	polr3c	98	81.768	Cynoglossus_semilaevis
ENSXMAG00000016215	polr3c	100	90.476	ENSCVAG00000022458	polr3c	100	90.476	Cyprinodon_variegatus
ENSXMAG00000016215	polr3c	100	90.476	ENSCVAG00000009443	polr3c	100	90.476	Cyprinodon_variegatus
ENSXMAG00000016215	polr3c	100	75.686	ENSDARG00000057562	polr3c	99	75.320	Danio_rerio
ENSXMAG00000016215	polr3c	71	65.990	ENSDNOG00000012149	POLR3C	99	65.491	Dasypus_novemcinctus
ENSXMAG00000016215	polr3c	99	63.004	ENSDORG00000013430	Polr3c	99	62.250	Dipodomys_ordii
ENSXMAG00000016215	polr3c	99	30.561	FBgn0038057	CG12267	98	30.645	Drosophila_melanogaster
ENSXMAG00000016215	polr3c	99	55.191	ENSETEG00000017696	POLR3C	99	54.710	Echinops_telfairi
ENSXMAG00000016215	polr3c	99	63.071	ENSEASG00005007417	POLR3C	99	62.727	Equus_asinus_asinus
ENSXMAG00000016215	polr3c	99	61.426	ENSECAG00000023713	POLR3C	99	61.091	Equus_caballus
ENSXMAG00000016215	polr3c	99	62.454	ENSEEUG00000011124	POLR3C	99	61.931	Erinaceus_europaeus
ENSXMAG00000016215	polr3c	99	80.183	ENSELUG00000013209	polr3c	99	79.083	Esox_lucius
ENSXMAG00000016215	polr3c	99	63.620	ENSFCAG00000013360	POLR3C	99	63.406	Felis_catus
ENSXMAG00000016215	polr3c	99	63.254	ENSFDAG00000021078	POLR3C	99	62.727	Fukomys_damarensis
ENSXMAG00000016215	polr3c	100	91.026	ENSFHEG00000000872	polr3c	100	91.026	Fundulus_heteroclitus
ENSXMAG00000016215	polr3c	99	78.285	ENSGMOG00000018937	polr3c	99	77.737	Gadus_morhua
ENSXMAG00000016215	polr3c	86	59.579	ENSGALG00000052515	-	100	58.799	Gallus_gallus
ENSXMAG00000016215	polr3c	100	96.337	ENSGAFG00000014721	polr3c	100	96.337	Gambusia_affinis
ENSXMAG00000016215	polr3c	100	83.700	ENSGACG00000011829	polr3c	99	83.516	Gasterosteus_aculeatus
ENSXMAG00000016215	polr3c	99	64.545	ENSGAGG00000010176	POLR3C	99	64.130	Gopherus_agassizii
ENSXMAG00000016215	polr3c	99	63.071	ENSGGOG00000007279	POLR3C	99	62.727	Gorilla_gorilla
ENSXMAG00000016215	polr3c	100	85.165	ENSHBUG00000003619	polr3c	99	85.165	Haplochromis_burtoni
ENSXMAG00000016215	polr3c	99	62.706	ENSHGLG00000014978	POLR3C	99	62.364	Heterocephalus_glaber_female
ENSXMAG00000016215	polr3c	99	62.706	ENSHGLG00100015620	POLR3C	99	62.364	Heterocephalus_glaber_male
ENSXMAG00000016215	polr3c	100	78.388	ENSHCOG00000000823	polr3c	99	77.473	Hippocampus_comes
ENSXMAG00000016215	polr3c	100	74.229	ENSIPUG00000008657	polr3c	99	74.270	Ictalurus_punctatus
ENSXMAG00000016215	polr3c	99	63.437	ENSSTOG00000014601	POLR3C	99	63.091	Ictidomys_tridecemlineatus
ENSXMAG00000016215	polr3c	99	64.037	ENSJJAG00000011447	Polr3c	99	63.455	Jaculus_jaculus
ENSXMAG00000016215	polr3c	100	85.531	ENSKMAG00000001574	polr3c	99	85.531	Kryptolebias_marmoratus
ENSXMAG00000016215	polr3c	100	84.982	ENSLBEG00000026567	polr3c	99	84.799	Labrus_bergylta
ENSXMAG00000016215	polr3c	99	63.686	ENSLACG00000017216	POLR3C	99	62.956	Latimeria_chalumnae
ENSXMAG00000016215	polr3c	100	64.557	ENSLOCG00000006400	polr3c	99	64.388	Lepisosteus_oculatus
ENSXMAG00000016215	polr3c	99	63.620	ENSLAFG00000029485	POLR3C	99	63.273	Loxodonta_africana
ENSXMAG00000016215	polr3c	99	63.254	ENSMFAG00000040338	POLR3C	99	62.909	Macaca_fascicularis
ENSXMAG00000016215	polr3c	99	63.254	ENSMMUG00000016735	POLR3C	99	62.909	Macaca_mulatta
ENSXMAG00000016215	polr3c	99	63.254	ENSMNEG00000040944	POLR3C	99	62.909	Macaca_nemestrina
ENSXMAG00000016215	polr3c	99	63.254	ENSMLEG00000031091	POLR3C	99	62.909	Mandrillus_leucophaeus
ENSXMAG00000016215	polr3c	100	84.982	ENSMAMG00000014770	polr3c	99	84.066	Mastacembelus_armatus
ENSXMAG00000016215	polr3c	100	84.615	ENSMZEG00005015882	polr3c	99	84.615	Maylandia_zebra
ENSXMAG00000016215	polr3c	78	51.501	ENSMAUG00000021521	-	98	51.030	Mesocricetus_auratus
ENSXMAG00000016215	polr3c	99	63.187	ENSMAUG00000001454	-	99	62.795	Mesocricetus_auratus
ENSXMAG00000016215	polr3c	99	63.254	ENSMICG00000034253	POLR3C	99	62.909	Microcebus_murinus
ENSXMAG00000016215	polr3c	99	60.037	ENSMOCG00000000997	Polr3c	99	59.489	Microtus_ochrogaster
ENSXMAG00000016215	polr3c	100	83.700	ENSMMOG00000003989	polr3c	100	83.150	Mola_mola
ENSXMAG00000016215	polr3c	99	64.534	ENSMODG00000018745	-	74	64.182	Monodelphis_domestica
ENSXMAG00000016215	polr3c	99	83.853	ENSMALG00000000156	polr3c	99	83.303	Monopterus_albus
ENSXMAG00000016215	polr3c	99	63.736	MGP_CAROLIEiJ_G0025390	Polr3c	99	63.388	Mus_caroli
ENSXMAG00000016215	polr3c	99	63.370	ENSMUSG00000028099	Polr3c	99	63.024	Mus_musculus
ENSXMAG00000016215	polr3c	99	63.370	MGP_PahariEiJ_G0026835	Polr3c	99	63.024	Mus_pahari
ENSXMAG00000016215	polr3c	99	63.553	MGP_SPRETEiJ_G0026337	Polr3c	99	63.206	Mus_spretus
ENSXMAG00000016215	polr3c	99	63.620	ENSMPUG00000000656	POLR3C	99	63.273	Mustela_putorius_furo
ENSXMAG00000016215	polr3c	99	63.091	ENSMLUG00000004060	POLR3C	99	62.523	Myotis_lucifugus
ENSXMAG00000016215	polr3c	99	63.370	ENSNGAG00000013090	Polr3c	99	63.024	Nannospalax_galili
ENSXMAG00000016215	polr3c	100	85.714	ENSNBRG00000003707	polr3c	99	85.714	Neolamprologus_brichardi
ENSXMAG00000016215	polr3c	99	63.254	ENSNLEG00000005645	POLR3C	99	62.909	Nomascus_leucogenys
ENSXMAG00000016215	polr3c	86	76.423	ENSMEUG00000012664	POLR3C	86	76.423	Notamacropus_eugenii
ENSXMAG00000016215	polr3c	99	61.243	ENSOPRG00000004244	POLR3C	99	61.091	Ochotona_princeps
ENSXMAG00000016215	polr3c	99	62.591	ENSODEG00000000304	POLR3C	99	62.250	Octodon_degus
ENSXMAG00000016215	polr3c	100	86.081	ENSONIG00000006370	polr3c	99	86.081	Oreochromis_niloticus
ENSXMAG00000016215	polr3c	68	44.562	ENSOANG00000000559	-	100	44.562	Ornithorhynchus_anatinus
ENSXMAG00000016215	polr3c	99	63.254	ENSOCUG00000003050	POLR3C	99	62.909	Oryctolagus_cuniculus
ENSXMAG00000016215	polr3c	99	84.926	ENSORLG00000010133	polr3c	99	84.743	Oryzias_latipes
ENSXMAG00000016215	polr3c	99	84.191	ENSORLG00020009245	polr3c	99	84.249	Oryzias_latipes_hni
ENSXMAG00000016215	polr3c	99	84.559	ENSORLG00015015223	polr3c	99	84.375	Oryzias_latipes_hsok
ENSXMAG00000016215	polr3c	100	85.348	ENSOMEG00000008558	polr3c	99	85.165	Oryzias_melastigma
ENSXMAG00000016215	polr3c	99	62.523	ENSOGAG00000000209	POLR3C	99	62.182	Otolemur_garnettii
ENSXMAG00000016215	polr3c	99	64.168	ENSOARG00000020588	POLR3C	99	63.636	Ovis_aries
ENSXMAG00000016215	polr3c	99	63.071	ENSPPAG00000025184	POLR3C	99	62.727	Pan_paniscus
ENSXMAG00000016215	polr3c	99	63.620	ENSPPRG00000008809	POLR3C	99	63.406	Panthera_pardus
ENSXMAG00000016215	polr3c	99	63.620	ENSPTIG00000009916	POLR3C	99	63.406	Panthera_tigris_altaica
ENSXMAG00000016215	polr3c	99	63.254	ENSPTRG00000001208	POLR3C	99	62.909	Pan_troglodytes
ENSXMAG00000016215	polr3c	99	63.254	ENSPANG00000019404	POLR3C	99	62.909	Papio_anubis
ENSXMAG00000016215	polr3c	100	72.727	ENSPKIG00000014883	polr3c	99	71.095	Paramormyrops_kingsleyae
ENSXMAG00000016215	polr3c	99	64.168	ENSPSIG00000004694	POLR3C	99	63.587	Pelodiscus_sinensis
ENSXMAG00000016215	polr3c	99	80.331	ENSPMGG00000007761	polr3c	99	79.599	Periophthalmus_magnuspinnatus
ENSXMAG00000016215	polr3c	99	63.187	ENSPEMG00000016322	Polr3c	99	62.842	Peromyscus_maniculatus_bairdii
ENSXMAG00000016215	polr3c	99	58.333	ENSPMAG00000006993	polr3c	99	58.152	Petromyzon_marinus
ENSXMAG00000016215	polr3c	99	64.899	ENSPCIG00000011954	POLR3C	99	64.364	Phascolarctos_cinereus
ENSXMAG00000016215	polr3c	100	96.709	ENSPFOG00000014106	polr3c	100	96.709	Poecilia_formosa
ENSXMAG00000016215	polr3c	100	97.070	ENSPLAG00000018932	polr3c	100	97.070	Poecilia_latipinna
ENSXMAG00000016215	polr3c	100	96.709	ENSPMEG00000023273	polr3c	100	96.709	Poecilia_mexicana
ENSXMAG00000016215	polr3c	100	96.337	ENSPREG00000017050	polr3c	100	96.337	Poecilia_reticulata
ENSXMAG00000016215	polr3c	99	63.437	ENSPPYG00000000936	POLR3C	99	63.091	Pongo_abelii
ENSXMAG00000016215	polr3c	90	63.855	ENSPCAG00000010501	POLR3C	99	63.473	Procavia_capensis
ENSXMAG00000016215	polr3c	99	54.648	ENSPCOG00000024937	POLR3C	99	54.494	Propithecus_coquereli
ENSXMAG00000016215	polr3c	99	62.888	ENSPVAG00000014483	POLR3C	99	62.545	Pteropus_vampyrus
ENSXMAG00000016215	polr3c	100	85.348	ENSPNYG00000004504	polr3c	99	85.348	Pundamilia_nyererei
ENSXMAG00000016215	polr3c	98	74.397	ENSPNAG00000018675	polr3c	99	74.499	Pygocentrus_nattereri
ENSXMAG00000016215	polr3c	99	63.004	ENSRNOG00000033560	Polr3c	99	62.659	Rattus_norvegicus
ENSXMAG00000016215	polr3c	99	63.071	ENSRBIG00000035432	POLR3C	99	62.909	Rhinopithecus_bieti
ENSXMAG00000016215	polr3c	99	63.071	ENSRROG00000039959	POLR3C	99	62.909	Rhinopithecus_roxellana
ENSXMAG00000016215	polr3c	90	62.753	ENSSBOG00000028429	POLR3C	99	62.374	Saimiri_boliviensis_boliviensis
ENSXMAG00000016215	polr3c	99	64.534	ENSSHAG00000018565	POLR3C	99	64.000	Sarcophilus_harrisii
ENSXMAG00000016215	polr3c	99	73.857	ENSSFOG00015021863	polr3c	99	72.744	Scleropages_formosus
ENSXMAG00000016215	polr3c	100	83.942	ENSSMAG00000016000	polr3c	99	84.854	Scophthalmus_maximus
ENSXMAG00000016215	polr3c	100	85.584	ENSSDUG00000006590	polr3c	99	84.249	Seriola_dumerili
ENSXMAG00000016215	polr3c	100	85.219	ENSSLDG00000015614	polr3c	97	85.401	Seriola_lalandi_dorsalis
ENSXMAG00000016215	polr3c	60	69.970	ENSSARG00000014380	POLR3C	99	70.270	Sorex_araneus
ENSXMAG00000016215	polr3c	99	64.899	ENSSPUG00000001834	POLR3C	99	64.674	Sphenodon_punctatus
ENSXMAG00000016215	polr3c	100	87.179	ENSSPAG00000022520	polr3c	99	87.179	Stegastes_partitus
ENSXMAG00000016215	polr3c	99	63.620	ENSSSCG00000006691	POLR3C	99	63.273	Sus_scrofa
ENSXMAG00000016215	polr3c	99	59.307	ENSTGUG00000016941	POLR3C	99	59.489	Taeniopygia_guttata
ENSXMAG00000016215	polr3c	100	80.769	ENSTRUG00000010726	polr3c	100	80.403	Takifugu_rubripes
ENSXMAG00000016215	polr3c	100	81.685	ENSTNIG00000019501	polr3c	100	81.353	Tetraodon_nigroviridis
ENSXMAG00000016215	polr3c	74	64.865	ENSTBEG00000015610	POLR3C	98	64.390	Tupaia_belangeri
ENSXMAG00000016215	polr3c	53	63.934	ENSTTRG00000009216	POLR3C	55	63.934	Tursiops_truncatus
ENSXMAG00000016215	polr3c	99	63.803	ENSUAMG00000021906	POLR3C	99	63.225	Ursus_americanus
ENSXMAG00000016215	polr3c	99	63.803	ENSUMAG00000010180	POLR3C	99	63.225	Ursus_maritimus
ENSXMAG00000016215	polr3c	99	63.620	ENSVVUG00000007421	POLR3C	99	63.437	Vulpes_vulpes
ENSXMAG00000016215	polr3c	100	89.781	ENSXCOG00000019524	polr3c	100	88.686	Xiphophorus_couchianus