EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016273 (Gene tree)
Gene ID: 102229210
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 10959 bases
Position: chr4:8621553-8632511
Accession: 102229210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	1	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	2	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	3	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	4	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	5	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	6	7
ENSXMAP00000029042	zf-C2H2	PF00096.26	4.1e-37	7	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	1	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	2	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	3	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	4	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	5	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	6	7
ENSXMAP00000016296	zf-C2H2	PF00096.26	5.7e-35	7	7
ENSXMAP00000029042	zf-met	PF12874.7	6.5e-24	1	5
ENSXMAP00000029042	zf-met	PF12874.7	6.5e-24	2	5
ENSXMAP00000029042	zf-met	PF12874.7	6.5e-24	3	5
ENSXMAP00000029042	zf-met	PF12874.7	6.5e-24	4	5
ENSXMAP00000029042	zf-met	PF12874.7	6.5e-24	5	5
ENSXMAP00000016296	zf-met	PF12874.7	1.1e-23	1	5
ENSXMAP00000016296	zf-met	PF12874.7	1.1e-23	2	5
ENSXMAP00000016296	zf-met	PF12874.7	1.1e-23	3	5
ENSXMAP00000016296	zf-met	PF12874.7	1.1e-23	4	5
ENSXMAP00000016296	zf-met	PF12874.7	1.1e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028019	-	5738	-	ENSXMAP00000029042	1213 (aa)	-	-
ENSXMAT00000016320	-	5307	XM_005796117	ENSXMAP00000016296	1309 (aa)	XP_005796174	M4APA1

Gene Model

Click here to download ENSXMAG00000016273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016273	sall1a	99	67.463	ENSG00000103449	SALL1	100	67.537	Homo_sapiens
ENSXMAG00000016273	sall1a	100	93.048	ENSAPOG00000022764	sall1a	100	93.048	Acanthochromis_polyacanthus
ENSXMAG00000016273	sall1a	99	66.774	ENSAMEG00000006817	SALL1	100	66.866	Ailuropoda_melanoleuca
ENSXMAG00000016273	sall1a	100	91.673	ENSACIG00000004231	sall1a	100	91.673	Amphilophus_citrinellus
ENSXMAG00000016273	sall1a	100	93.430	ENSAOCG00000002800	sall1a	100	93.430	Amphiprion_ocellaris
ENSXMAG00000016273	sall1a	100	93.240	ENSAPEG00000010179	sall1a	100	93.201	Amphiprion_percula
ENSXMAG00000016273	sall1a	99	91.131	ENSATEG00000003006	sall1a	99	91.131	Anabas_testudineus
ENSXMAG00000016273	sall1a	100	69.392	ENSAPLG00000003356	SALL1	100	69.692	Anas_platyrhynchos
ENSXMAG00000016273	sall1a	99	68.200	ENSACAG00000014399	SALL1	97	67.372	Anolis_carolinensis
ENSXMAG00000016273	sall1a	99	67.638	ENSANAG00000027238	SALL1	99	67.932	Aotus_nancymaae
ENSXMAG00000016273	sall1a	100	91.749	ENSACLG00000017148	sall1a	100	91.749	Astatotilapia_calliptera
ENSXMAG00000016273	sall1a	100	79.787	ENSAMXG00000018599	sall1a	100	80.243	Astyanax_mexicanus
ENSXMAG00000016273	sall1a	99	52.741	ENSAMXG00000017702	sall1b	99	53.010	Astyanax_mexicanus
ENSXMAG00000016273	sall1a	100	67.176	ENSBTAG00000008544	SALL1	100	67.265	Bos_taurus
ENSXMAG00000016273	sall1a	99	67.886	ENSCJAG00000001740	SALL1	99	68.209	Callithrix_jacchus
ENSXMAG00000016273	sall1a	99	67.044	ENSCAFG00000009755	SALL1	100	67.388	Canis_familiaris
ENSXMAG00000016273	sall1a	99	67.044	ENSCAFG00020002842	SALL1	100	67.388	Canis_lupus_dingo
ENSXMAG00000016273	sall1a	100	67.070	ENSCHIG00000026074	SALL1	100	67.216	Capra_hircus
ENSXMAG00000016273	sall1a	99	68.233	ENSTSYG00000029464	SALL1	100	68.233	Carlito_syrichta
ENSXMAG00000016273	sall1a	99	68.116	ENSCPOG00000006564	SALL1	99	68.064	Cavia_porcellus
ENSXMAG00000016273	sall1a	99	65.994	ENSCCAG00000001639	SALL1	100	66.119	Cebus_capucinus
ENSXMAG00000016273	sall1a	99	67.788	ENSCATG00000004982	SALL1	100	68.036	Cercocebus_atys
ENSXMAG00000016273	sall1a	99	67.638	ENSCLAG00000006380	SALL1	100	67.961	Chinchilla_lanigera
ENSXMAG00000016273	sall1a	99	66.966	ENSCSAG00000005319	SALL1	100	67.212	Chlorocebus_sabaeus
ENSXMAG00000016273	sall1a	71	65.625	ENSCHOG00000000800	-	69	65.882	Choloepus_hoffmanni
ENSXMAG00000016273	sall1a	100	69.317	ENSCPBG00000015924	SALL1	100	69.692	Chrysemys_picta_bellii
ENSXMAG00000016273	sall1a	99	68.090	ENSCANG00000036664	SALL1	100	68.165	Colobus_angolensis_palliatus
ENSXMAG00000016273	sall1a	99	66.567	ENSCGRG00001023314	-	100	66.866	Cricetulus_griseus_chok1gshd
ENSXMAG00000016273	sall1a	99	66.452	ENSCGRG00000009496	Sall1	100	66.743	Cricetulus_griseus_crigri
ENSXMAG00000016273	sall1a	99	88.872	ENSCSEG00000009349	sall1a	99	88.872	Cynoglossus_semilaevis
ENSXMAG00000016273	sall1a	90	94.755	ENSCVAG00000020513	sall1a	99	94.755	Cyprinodon_variegatus
ENSXMAG00000016273	sall1a	99	47.856	ENSDARG00000075891	sall1b	99	47.120	Danio_rerio
ENSXMAG00000016273	sall1a	100	79.227	ENSDARG00000074319	sall1a	100	78.848	Danio_rerio
ENSXMAG00000016273	sall1a	99	68.039	ENSDNOG00000016413	SALL1	100	68.114	Dasypus_novemcinctus
ENSXMAG00000016273	sall1a	99	67.339	ENSETEG00000015150	SALL1	99	67.431	Echinops_telfairi
ENSXMAG00000016273	sall1a	64	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSXMAG00000016273	sall1a	67	42.290	ENSEBUG00000008798	SALL1	94	35.540	Eptatretus_burgeri
ENSXMAG00000016273	sall1a	99	67.339	ENSEASG00005014602	SALL1	100	67.689	Equus_asinus_asinus
ENSXMAG00000016273	sall1a	90	65.458	ENSECAG00000011334	SALL1	99	65.813	Equus_caballus
ENSXMAG00000016273	sall1a	99	67.903	ENSEEUG00000002014	SALL1	100	67.582	Erinaceus_europaeus
ENSXMAG00000016273	sall1a	100	53.481	ENSELUG00000017774	-	100	54.167	Esox_lucius
ENSXMAG00000016273	sall1a	100	77.419	ENSELUG00000006159	sall1a	100	77.491	Esox_lucius
ENSXMAG00000016273	sall1a	99	66.076	ENSFCAG00000024654	SALL1	100	66.747	Felis_catus
ENSXMAG00000016273	sall1a	100	69.917	ENSFALG00000000074	SALL1	100	69.820	Ficedula_albicollis
ENSXMAG00000016273	sall1a	74	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSXMAG00000016273	sall1a	100	96.043	ENSFHEG00000012579	sall1a	100	96.028	Fundulus_heteroclitus
ENSXMAG00000016273	sall1a	100	83.486	ENSGMOG00000006103	sall1a	100	83.486	Gadus_morhua
ENSXMAG00000016273	sall1a	97	40.411	ENSGMOG00000013383	-	99	40.280	Gadus_morhua
ENSXMAG00000016273	sall1a	100	69.715	ENSGALG00000039238	SALL1	100	69.595	Gallus_gallus
ENSXMAG00000016273	sall1a	100	98.701	ENSGAFG00000009964	sall1a	100	98.701	Gambusia_affinis
ENSXMAG00000016273	sall1a	99	89.220	ENSGACG00000016702	sall1a	99	89.220	Gasterosteus_aculeatus
ENSXMAG00000016273	sall1a	100	69.190	ENSGAGG00000013979	SALL1	100	69.542	Gopherus_agassizii
ENSXMAG00000016273	sall1a	99	67.689	ENSGGOG00000000663	SALL1	100	67.838	Gorilla_gorilla
ENSXMAG00000016273	sall1a	100	91.673	ENSHBUG00000022005	sall1a	100	91.673	Haplochromis_burtoni
ENSXMAG00000016273	sall1a	99	68.460	ENSHGLG00000004288	-	100	68.633	Heterocephalus_glaber_female
ENSXMAG00000016273	sall1a	99	68.460	ENSHGLG00100017496	SALL1	100	68.633	Heterocephalus_glaber_male
ENSXMAG00000016273	sall1a	100	84.894	ENSHCOG00000000974	sall1a	100	84.819	Hippocampus_comes
ENSXMAG00000016273	sall1a	100	79.590	ENSIPUG00000016265	SALL1	100	78.631	Ictalurus_punctatus
ENSXMAG00000016273	sall1a	99	50.791	ENSIPUG00000022928	sall1b	99	50.565	Ictalurus_punctatus
ENSXMAG00000016273	sall1a	99	67.630	ENSSTOG00000020885	SALL1	100	68.053	Ictidomys_tridecemlineatus
ENSXMAG00000016273	sall1a	100	92.745	ENSKMAG00000016681	sall1a	100	92.590	Kryptolebias_marmoratus
ENSXMAG00000016273	sall1a	99	88.550	ENSLBEG00000012207	sall1a	95	88.741	Labrus_bergylta
ENSXMAG00000016273	sall1a	99	38.474	ENSLACG00000014018	-	93	38.579	Latimeria_chalumnae
ENSXMAG00000016273	sall1a	100	68.520	ENSLACG00000003556	SALL1	100	68.820	Latimeria_chalumnae
ENSXMAG00000016273	sall1a	100	77.887	ENSLOCG00000007283	sall1b	100	77.811	Lepisosteus_oculatus
ENSXMAG00000016273	sall1a	99	67.259	ENSLAFG00000015251	SALL1	100	67.654	Loxodonta_africana
ENSXMAG00000016273	sall1a	99	67.812	ENSMFAG00000003298	SALL1	100	67.886	Macaca_fascicularis
ENSXMAG00000016273	sall1a	99	67.552	ENSMMUG00000017200	SALL1	100	67.633	Macaca_mulatta
ENSXMAG00000016273	sall1a	99	67.578	ENSMNEG00000034770	SALL1	100	67.578	Macaca_nemestrina
ENSXMAG00000016273	sall1a	99	67.937	ENSMLEG00000036406	SALL1	100	68.012	Mandrillus_leucophaeus
ENSXMAG00000016273	sall1a	99	92.208	ENSMAMG00000004164	sall1a	99	92.208	Mastacembelus_armatus
ENSXMAG00000016273	sall1a	100	91.749	ENSMZEG00005006479	sall1a	100	91.749	Maylandia_zebra
ENSXMAG00000016273	sall1a	100	69.442	ENSMGAG00000004704	SALL1	100	69.396	Meleagris_gallopavo
ENSXMAG00000016273	sall1a	99	65.945	ENSMAUG00000019093	Sall1	100	66.045	Mesocricetus_auratus
ENSXMAG00000016273	sall1a	100	67.040	ENSMICG00000036486	SALL1	100	67.265	Microcebus_murinus
ENSXMAG00000016273	sall1a	99	90.673	ENSMMOG00000016400	sall1a	99	90.673	Mola_mola
ENSXMAG00000016273	sall1a	99	68.539	ENSMODG00000013114	SALL1	99	68.994	Monodelphis_domestica
ENSXMAG00000016273	sall1a	99	91.419	ENSMALG00000013400	sall1a	99	91.361	Monopterus_albus
ENSXMAG00000016273	sall1a	99	66.691	MGP_CAROLIEiJ_G0031362	Sall1	100	66.815	Mus_caroli
ENSXMAG00000016273	sall1a	99	66.815	MGP_PahariEiJ_G0022961	Sall1	100	66.691	Mus_pahari
ENSXMAG00000016273	sall1a	99	66.345	MGP_SPRETEiJ_G0032480	Sall1	100	66.642	Mus_spretus
ENSXMAG00000016273	sall1a	100	66.184	ENSMPUG00000003265	SALL1	96	66.591	Mustela_putorius_furo
ENSXMAG00000016273	sall1a	100	65.088	ENSMLUG00000015541	SALL1	99	65.928	Myotis_lucifugus
ENSXMAG00000016273	sall1a	100	91.902	ENSNBRG00000009307	sall1a	100	91.902	Neolamprologus_brichardi
ENSXMAG00000016273	sall1a	94	80.110	ENSNLEG00000001008	SALL1	99	79.670	Nomascus_leucogenys
ENSXMAG00000016273	sall1a	99	68.642	ENSMEUG00000012206	SALL1	99	68.764	Notamacropus_eugenii
ENSXMAG00000016273	sall1a	88	72.581	ENSOPRG00000005645	SALL1	71	72.247	Ochotona_princeps
ENSXMAG00000016273	sall1a	99	67.588	ENSODEG00000003685	SALL1	100	67.961	Octodon_degus
ENSXMAG00000016273	sall1a	100	92.284	ENSONIG00000002831	sall1a	100	92.284	Oreochromis_niloticus
ENSXMAG00000016273	sall1a	100	63.780	ENSOANG00000013399	SALL1	97	78.049	Ornithorhynchus_anatinus
ENSXMAG00000016273	sall1a	100	90.767	ENSORLG00000013827	sall1a	100	91.231	Oryzias_latipes
ENSXMAG00000016273	sall1a	100	90.767	ENSORLG00020020570	sall1a	100	90.680	Oryzias_latipes_hni
ENSXMAG00000016273	sall1a	100	90.849	ENSORLG00015018830	sall1a	100	91.315	Oryzias_latipes_hsok
ENSXMAG00000016273	sall1a	100	90.684	ENSOMEG00000016043	sall1a	100	90.684	Oryzias_melastigma
ENSXMAG00000016273	sall1a	99	67.737	ENSOGAG00000027316	SALL1	100	67.788	Otolemur_garnettii
ENSXMAG00000016273	sall1a	100	63.331	ENSOARG00000017583	SALL1	100	63.244	Ovis_aries
ENSXMAG00000016273	sall1a	99	67.578	ENSPPAG00000035657	SALL1	99	67.969	Pan_paniscus
ENSXMAG00000016273	sall1a	99	50.527	ENSPPAG00000035136	-	99	50.375	Pan_paniscus
ENSXMAG00000016273	sall1a	100	65.945	ENSPPRG00000023283	SALL1	100	66.667	Panthera_pardus
ENSXMAG00000016273	sall1a	80	71.053	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSXMAG00000016273	sall1a	99	67.489	ENSPTRG00000008108	SALL1	100	67.881	Pan_troglodytes
ENSXMAG00000016273	sall1a	99	50.419	ENSPTRG00000045256	-	99	50.725	Pan_troglodytes
ENSXMAG00000016273	sall1a	99	67.788	ENSPANG00000024176	SALL1	100	67.937	Papio_anubis
ENSXMAG00000016273	sall1a	100	72.616	ENSPKIG00000022251	sall1a	100	72.562	Paramormyrops_kingsleyae
ENSXMAG00000016273	sall1a	100	70.455	ENSPKIG00000005383	-	100	70.931	Paramormyrops_kingsleyae
ENSXMAG00000016273	sall1a	100	69.692	ENSPSIG00000008582	SALL1	100	69.820	Pelodiscus_sinensis
ENSXMAG00000016273	sall1a	99	85.502	ENSPMGG00000021788	sall1a	99	84.238	Periophthalmus_magnuspinnatus
ENSXMAG00000016273	sall1a	99	48.617	ENSPMAG00000008148	sall1b	98	47.874	Petromyzon_marinus
ENSXMAG00000016273	sall1a	99	68.689	ENSPCIG00000017840	SALL1	99	68.764	Phascolarctos_cinereus
ENSXMAG00000016273	sall1a	100	98.763	ENSPFOG00000015799	sall1a	96	98.679	Poecilia_formosa
ENSXMAG00000016273	sall1a	100	98.930	ENSPLAG00000022539	sall1a	100	98.930	Poecilia_latipinna
ENSXMAG00000016273	sall1a	100	99.083	ENSPMEG00000020894	sall1a	100	99.083	Poecilia_mexicana
ENSXMAG00000016273	sall1a	100	98.549	ENSPREG00000006802	sall1a	100	98.549	Poecilia_reticulata
ENSXMAG00000016273	sall1a	90	66.443	ENSPPYG00000007345	SALL1	96	66.861	Pongo_abelii
ENSXMAG00000016273	sall1a	84	71.605	ENSPCAG00000008162	SALL1	93	71.605	Procavia_capensis
ENSXMAG00000016273	sall1a	100	67.040	ENSPCOG00000028192	SALL1	100	67.412	Propithecus_coquereli
ENSXMAG00000016273	sall1a	72	69.284	ENSPVAG00000015374	SALL1	100	69.364	Pteropus_vampyrus
ENSXMAG00000016273	sall1a	100	91.826	ENSPNYG00000010865	sall1a	100	91.826	Pundamilia_nyererei
ENSXMAG00000016273	sall1a	100	78.208	ENSPNAG00000023644	sall1a	100	78.664	Pygocentrus_nattereri
ENSXMAG00000016273	sall1a	99	53.754	ENSPNAG00000007442	sall1b	99	53.823	Pygocentrus_nattereri
ENSXMAG00000016273	sall1a	69	65.306	ENSPNAG00000028248	-	86	65.306	Pygocentrus_nattereri
ENSXMAG00000016273	sall1a	100	66.942	ENSRNOG00000013907	Sall1	100	67.091	Rattus_norvegicus
ENSXMAG00000016273	sall1a	99	67.446	ENSRBIG00000015707	SALL1	100	67.708	Rhinopithecus_bieti
ENSXMAG00000016273	sall1a	99	67.446	ENSRROG00000035777	SALL1	100	67.708	Rhinopithecus_roxellana
ENSXMAG00000016273	sall1a	99	67.737	ENSSBOG00000032186	SALL1	100	67.807	Saimiri_boliviensis_boliviensis
ENSXMAG00000016273	sall1a	99	68.267	ENSSHAG00000009477	SALL1	99	68.468	Sarcophilus_harrisii
ENSXMAG00000016273	sall1a	100	71.579	ENSSFOG00015001590	sall1a	99	72.209	Scleropages_formosus
ENSXMAG00000016273	sall1a	100	72.830	ENSSFOG00015020020	sall1a	100	72.755	Scleropages_formosus
ENSXMAG00000016273	sall1a	99	91.361	ENSSMAG00000009160	sall1a	99	91.361	Scophthalmus_maximus
ENSXMAG00000016273	sall1a	99	92.966	ENSSDUG00000006507	sall1a	99	92.966	Seriola_dumerili
ENSXMAG00000016273	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSXMAG00000016273	sall1a	99	92.966	ENSSLDG00000017721	sall1a	99	92.966	Seriola_lalandi_dorsalis
ENSXMAG00000016273	sall1a	99	67.041	ENSSARG00000000661	SALL1	99	67.176	Sorex_araneus
ENSXMAG00000016273	sall1a	100	68.792	ENSSPUG00000000156	SALL1	100	69.115	Sphenodon_punctatus
ENSXMAG00000016273	sall1a	100	93.359	ENSSPAG00000021615	sall1a	100	93.359	Stegastes_partitus
ENSXMAG00000016273	sall1a	99	66.747	ENSSSCG00000002836	SALL1	100	66.766	Sus_scrofa
ENSXMAG00000016273	sall1a	100	69.542	ENSTGUG00000007514	SALL1	100	69.444	Taeniopygia_guttata
ENSXMAG00000016273	sall1a	91	86.611	ENSTRUG00000008950	sall1a	100	86.611	Takifugu_rubripes
ENSXMAG00000016273	sall1a	92	85.167	ENSTNIG00000004257	sall1a	100	85.167	Tetraodon_nigroviridis
ENSXMAG00000016273	sall1a	77	75.676	ENSTBEG00000002119	-	53	75.676	Tupaia_belangeri
ENSXMAG00000016273	sall1a	90	65.633	ENSUAMG00000023379	-	92	66.025	Ursus_americanus
ENSXMAG00000016273	sall1a	90	65.745	ENSVVUG00000019383	-	99	66.054	Vulpes_vulpes
ENSXMAG00000016273	sall1a	100	67.068	ENSXETG00000018417	sall1	100	65.816	Xenopus_tropicalis
ENSXMAG00000016273	sall1a	97	33.939	ENSXETG00000017176	sall2	94	38.065	Xenopus_tropicalis