EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016347 (Gene tree)
Gene ID: 102230843
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8092 bases
Position: chr3:18397903-18405994
Accession: 102230843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016388	PRP3	PF08572.10	1.7e-77	1	1
ENSXMAP00000036996	PRP3	PF08572.10	1.7e-71	1	1
ENSXMAP00000036996	PWI	PF01480.17	1.8e-11	1	1
ENSXMAP00000016388	PWI	PF01480.17	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029303	-	1827	-	ENSXMAP00000036996	608 (aa)	-	-
ENSXMAT00000016412	-	2975	XM_023331571	ENSXMAP00000016388	691 (aa)	XP_023187339	M4APJ3

Gene Model

Click here to download ENSXMAG00000016347's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016347	prpf3	99	71.875	ENSG00000117360	PRPF3	100	72.493	Homo_sapiens
ENSXMAG00000016347	prpf3	100	87.966	ENSAPOG00000015584	prpf3	100	87.966	Acanthochromis_polyacanthus
ENSXMAG00000016347	prpf3	99	71.875	ENSAMEG00000001630	PRPF3	100	72.493	Ailuropoda_melanoleuca
ENSXMAG00000016347	prpf3	100	85.997	ENSACIG00000007876	prpf3	100	86.280	Amphilophus_citrinellus
ENSXMAG00000016347	prpf3	100	87.536	ENSAOCG00000011449	prpf3	100	87.536	Amphiprion_ocellaris
ENSXMAG00000016347	prpf3	100	87.822	ENSATEG00000023583	prpf3	100	87.249	Anabas_testudineus
ENSXMAG00000016347	prpf3	99	72.493	ENSAPLG00000002440	PRPF3	100	72.350	Anas_platyrhynchos
ENSXMAG00000016347	prpf3	99	71.469	ENSACAG00000003176	PRPF3	100	71.671	Anolis_carolinensis
ENSXMAG00000016347	prpf3	99	71.875	ENSANAG00000026138	PRPF3	100	72.493	Aotus_nancymaae
ENSXMAG00000016347	prpf3	100	86.494	ENSACLG00000020127	prpf3	100	85.940	Astatotilapia_calliptera
ENSXMAG00000016347	prpf3	100	79.944	ENSAMXG00000007306	prpf3	100	78.822	Astyanax_mexicanus
ENSXMAG00000016347	prpf3	99	71.875	ENSBTAG00000013946	PRPF3	100	72.493	Bos_taurus
ENSXMAG00000016347	prpf3	81	39.261	WBGene00010844	prp-3	96	36.672	Caenorhabditis_elegans
ENSXMAG00000016347	prpf3	99	71.875	ENSCJAG00000009926	PRPF3	100	72.493	Callithrix_jacchus
ENSXMAG00000016347	prpf3	99	71.875	ENSCAFG00000011820	PRPF3	100	72.493	Canis_familiaris
ENSXMAG00000016347	prpf3	81	71.530	ENSCAFG00020019653	PRPF3	100	72.242	Canis_lupus_dingo
ENSXMAG00000016347	prpf3	99	71.875	ENSCHIG00000015434	PRPF3	100	72.493	Capra_hircus
ENSXMAG00000016347	prpf3	99	72.286	ENSTSYG00000001383	PRPF3	100	72.119	Carlito_syrichta
ENSXMAG00000016347	prpf3	92	66.054	ENSCAPG00000017812	PRPF3	95	65.886	Cavia_aperea
ENSXMAG00000016347	prpf3	99	72.143	ENSCPOG00000008068	PRPF3	100	71.977	Cavia_porcellus
ENSXMAG00000016347	prpf3	99	71.875	ENSCCAG00000026380	PRPF3	100	72.493	Cebus_capucinus
ENSXMAG00000016347	prpf3	99	59.520	ENSCATG00000041778	PRPF3	100	60.028	Cercocebus_atys
ENSXMAG00000016347	prpf3	99	72.017	ENSCLAG00000015009	PRPF3	100	72.636	Chinchilla_lanigera
ENSXMAG00000016347	prpf3	76	81.752	ENSCHOG00000011645	PRPF3	76	81.387	Choloepus_hoffmanni
ENSXMAG00000016347	prpf3	99	72.000	ENSCPBG00000008216	PRPF3	100	71.835	Chrysemys_picta_bellii
ENSXMAG00000016347	prpf3	65	60.341	ENSCING00000003312	-	99	60.437	Ciona_intestinalis
ENSXMAG00000016347	prpf3	84	55.083	ENSCSAVG00000008720	-	97	54.087	Ciona_savignyi
ENSXMAG00000016347	prpf3	99	71.307	ENSCANG00000036769	PRPF3	100	71.920	Colobus_angolensis_palliatus
ENSXMAG00000016347	prpf3	99	71.875	ENSCGRG00001019100	Prpf3	100	72.493	Cricetulus_griseus_chok1gshd
ENSXMAG00000016347	prpf3	99	71.875	ENSCGRG00000007322	Prpf3	100	72.493	Cricetulus_griseus_crigri
ENSXMAG00000016347	prpf3	100	84.409	ENSCSEG00000002532	prpf3	100	84.227	Cynoglossus_semilaevis
ENSXMAG00000016347	prpf3	100	91.799	ENSCVAG00000009318	prpf3	100	91.799	Cyprinodon_variegatus
ENSXMAG00000016347	prpf3	100	79.232	ENSDARG00000086425	prpf3	100	79.232	Danio_rerio
ENSXMAG00000016347	prpf3	99	74.531	ENSDNOG00000005904	PRPF3	100	74.219	Dasypus_novemcinctus
ENSXMAG00000016347	prpf3	93	71.803	ENSDORG00000008664	Prpf3	100	72.265	Dipodomys_ordii
ENSXMAG00000016347	prpf3	85	54.098	FBgn0036915	Prp3	99	54.312	Drosophila_melanogaster
ENSXMAG00000016347	prpf3	99	71.875	ENSETEG00000019124	PRPF3	100	72.636	Echinops_telfairi
ENSXMAG00000016347	prpf3	100	60.610	ENSEBUG00000011680	prpf3	100	60.477	Eptatretus_burgeri
ENSXMAG00000016347	prpf3	99	72.017	ENSEASG00005001566	PRPF3	100	72.636	Equus_asinus_asinus
ENSXMAG00000016347	prpf3	99	71.875	ENSECAG00000019840	PRPF3	100	72.493	Equus_caballus
ENSXMAG00000016347	prpf3	85	72.562	ENSEEUG00000007338	PRPF3	85	72.336	Erinaceus_europaeus
ENSXMAG00000016347	prpf3	100	73.864	ENSELUG00000013624	prpf3	100	73.722	Esox_lucius
ENSXMAG00000016347	prpf3	99	71.875	ENSFCAG00000013940	PRPF3	100	72.493	Felis_catus
ENSXMAG00000016347	prpf3	99	71.733	ENSFDAG00000010365	PRPF3	100	72.350	Fukomys_damarensis
ENSXMAG00000016347	prpf3	100	92.795	ENSFHEG00000021746	prpf3	100	92.795	Fundulus_heteroclitus
ENSXMAG00000016347	prpf3	100	81.650	ENSGMOG00000008535	prpf3	100	81.366	Gadus_morhua
ENSXMAG00000016347	prpf3	99	72.636	ENSGALG00000028205	PRPF3	100	72.493	Gallus_gallus
ENSXMAG00000016347	prpf3	100	97.685	ENSGAFG00000012671	prpf3	100	97.685	Gambusia_affinis
ENSXMAG00000016347	prpf3	100	85.328	ENSGACG00000011792	prpf3	100	84.758	Gasterosteus_aculeatus
ENSXMAG00000016347	prpf3	99	71.857	ENSGAGG00000013765	PRPF3	100	74.107	Gopherus_agassizii
ENSXMAG00000016347	prpf3	86	77.876	ENSGGOG00000013174	PRPF3	100	77.811	Gorilla_gorilla
ENSXMAG00000016347	prpf3	100	86.638	ENSHBUG00000003493	prpf3	100	86.638	Haplochromis_burtoni
ENSXMAG00000016347	prpf3	99	54.899	ENSHGLG00000016033	-	100	54.588	Heterocephalus_glaber_female
ENSXMAG00000016347	prpf3	99	71.733	ENSHGLG00000016569	PRPF3	100	72.350	Heterocephalus_glaber_female
ENSXMAG00000016347	prpf3	99	71.733	ENSHGLG00100007590	PRPF3	100	72.350	Heterocephalus_glaber_male
ENSXMAG00000016347	prpf3	99	55.189	ENSHGLG00100008951	-	100	54.874	Heterocephalus_glaber_male
ENSXMAG00000016347	prpf3	100	82.609	ENSHCOG00000014058	prpf3	100	82.857	Hippocampus_comes
ENSXMAG00000016347	prpf3	100	79.516	ENSIPUG00000000902	PRPF3	100	78.947	Ictalurus_punctatus
ENSXMAG00000016347	prpf3	99	71.875	ENSSTOG00000001889	PRPF3	100	72.493	Ictidomys_tridecemlineatus
ENSXMAG00000016347	prpf3	100	88.443	ENSKMAG00000001390	prpf3	100	88.443	Kryptolebias_marmoratus
ENSXMAG00000016347	prpf3	100	89.120	ENSLBEG00000026310	prpf3	100	89.440	Labrus_bergylta
ENSXMAG00000016347	prpf3	93	66.769	ENSLACG00000010541	PRPF3	100	66.615	Latimeria_chalumnae
ENSXMAG00000016347	prpf3	99	71.875	ENSLAFG00000004713	PRPF3	100	72.493	Loxodonta_africana
ENSXMAG00000016347	prpf3	99	71.875	ENSMFAG00000039791	PRPF3	100	72.493	Macaca_fascicularis
ENSXMAG00000016347	prpf3	92	71.586	ENSMMUG00000016301	PRPF3	97	73.237	Macaca_mulatta
ENSXMAG00000016347	prpf3	99	71.875	ENSMNEG00000038161	PRPF3	100	72.493	Macaca_nemestrina
ENSXMAG00000016347	prpf3	98	49.427	ENSMLEG00000041065	-	97	49.566	Mandrillus_leucophaeus
ENSXMAG00000016347	prpf3	86	77.876	ENSMLEG00000040609	PRPF3	100	77.811	Mandrillus_leucophaeus
ENSXMAG00000016347	prpf3	100	86.040	ENSMAMG00000014968	prpf3	100	85.938	Mastacembelus_armatus
ENSXMAG00000016347	prpf3	100	89.268	ENSMZEG00005015970	prpf3	100	89.268	Maylandia_zebra
ENSXMAG00000016347	prpf3	99	72.636	ENSMGAG00000000707	PRPF3	100	72.493	Meleagris_gallopavo
ENSXMAG00000016347	prpf3	99	71.733	ENSMAUG00000017112	Prpf3	100	72.493	Mesocricetus_auratus
ENSXMAG00000016347	prpf3	99	72.000	ENSMICG00000015386	PRPF3	100	74.286	Microcebus_murinus
ENSXMAG00000016347	prpf3	99	71.733	ENSMOCG00000000242	Prpf3	100	72.350	Microtus_ochrogaster
ENSXMAG00000016347	prpf3	100	80.536	ENSMMOG00000016131	prpf3	100	80.536	Mola_mola
ENSXMAG00000016347	prpf3	99	71.915	ENSMODG00000018774	PRPF3	100	72.532	Monodelphis_domestica
ENSXMAG00000016347	prpf3	100	83.286	ENSMALG00000007257	prpf3	100	83.381	Monopterus_albus
ENSXMAG00000016347	prpf3	99	71.857	MGP_CAROLIEiJ_G0025354	Prpf3	100	71.693	Mus_caroli
ENSXMAG00000016347	prpf3	99	71.857	ENSMUSG00000015748	Prpf3	100	71.693	Mus_musculus
ENSXMAG00000016347	prpf3	99	71.550	MGP_PahariEiJ_G0026798	Prpf3	100	71.795	Mus_pahari
ENSXMAG00000016347	prpf3	99	71.857	MGP_SPRETEiJ_G0026298	Prpf3	100	71.693	Mus_spretus
ENSXMAG00000016347	prpf3	99	70.071	ENSMPUG00000005080	PRPF3	100	70.630	Mustela_putorius_furo
ENSXMAG00000016347	prpf3	99	71.489	ENSMLUG00000004646	-	100	72.103	Myotis_lucifugus
ENSXMAG00000016347	prpf3	99	71.875	ENSNGAG00000000910	Prpf3	100	72.493	Nannospalax_galili
ENSXMAG00000016347	prpf3	100	86.076	ENSNBRG00000003462	prpf3	100	86.076	Neolamprologus_brichardi
ENSXMAG00000016347	prpf3	90	72.381	ENSNLEG00000009841	PRPF3	99	73.237	Nomascus_leucogenys
ENSXMAG00000016347	prpf3	83	63.824	ENSMEUG00000008733	PRPF3	89	63.750	Notamacropus_eugenii
ENSXMAG00000016347	prpf3	99	72.063	ENSOPRG00000010139	PRPF3	100	72.493	Ochotona_princeps
ENSXMAG00000016347	prpf3	99	54.765	ENSODEG00000014412	-	100	54.391	Octodon_degus
ENSXMAG00000016347	prpf3	99	72.143	ENSODEG00000011363	-	100	72.350	Octodon_degus
ENSXMAG00000016347	prpf3	100	87.340	ENSONIG00000006394	prpf3	100	87.340	Oreochromis_niloticus
ENSXMAG00000016347	prpf3	99	55.747	ENSOANG00000015441	PRPF3	100	55.476	Ornithorhynchus_anatinus
ENSXMAG00000016347	prpf3	99	71.875	ENSOCUG00000011760	PRPF3	100	72.493	Oryctolagus_cuniculus
ENSXMAG00000016347	prpf3	100	86.187	ENSORLG00000010330	prpf3	100	85.468	Oryzias_latipes
ENSXMAG00000016347	prpf3	100	86.331	ENSORLG00020009054	prpf3	100	85.612	Oryzias_latipes_hni
ENSXMAG00000016347	prpf3	100	86.043	ENSORLG00015015016	prpf3	100	85.324	Oryzias_latipes_hsok
ENSXMAG00000016347	prpf3	100	87.787	ENSOMEG00000000940	prpf3	100	87.539	Oryzias_melastigma
ENSXMAG00000016347	prpf3	99	68.220	ENSOGAG00000005352	PRPF3	100	68.803	Otolemur_garnettii
ENSXMAG00000016347	prpf3	99	71.875	ENSOARG00000020798	PRPF3	100	72.493	Ovis_aries
ENSXMAG00000016347	prpf3	99	71.733	ENSPPAG00000030983	PRPF3	100	72.350	Pan_paniscus
ENSXMAG00000016347	prpf3	98	55.604	ENSPPAG00000043769	-	99	55.087	Pan_paniscus
ENSXMAG00000016347	prpf3	99	71.875	ENSPPRG00000000731	PRPF3	100	72.493	Panthera_pardus
ENSXMAG00000016347	prpf3	99	71.875	ENSPTIG00000005516	PRPF3	100	72.493	Panthera_tigris_altaica
ENSXMAG00000016347	prpf3	98	54.585	ENSPTRG00000047819	-	99	54.070	Pan_troglodytes
ENSXMAG00000016347	prpf3	99	71.875	ENSPTRG00000001254	PRPF3	100	72.493	Pan_troglodytes
ENSXMAG00000016347	prpf3	99	71.733	ENSPANG00000000499	PRPF3	100	72.350	Papio_anubis
ENSXMAG00000016347	prpf3	100	84.591	ENSPKIG00000010501	prpf3	100	84.270	Paramormyrops_kingsleyae
ENSXMAG00000016347	prpf3	99	72.389	ENSPSIG00000014877	PRPF3	100	71.937	Pelodiscus_sinensis
ENSXMAG00000016347	prpf3	100	82.035	ENSPMGG00000007776	prpf3	100	82.194	Periophthalmus_magnuspinnatus
ENSXMAG00000016347	prpf3	99	71.875	ENSPEMG00000011672	Prpf3	100	72.493	Peromyscus_maniculatus_bairdii
ENSXMAG00000016347	prpf3	68	72.082	ENSPMAG00000005588	prpf3	97	72.540	Petromyzon_marinus
ENSXMAG00000016347	prpf3	99	71.915	ENSPCIG00000008795	PRPF3	100	72.532	Phascolarctos_cinereus
ENSXMAG00000016347	prpf3	100	97.151	ENSPFOG00000013638	prpf3	100	97.151	Poecilia_formosa
ENSXMAG00000016347	prpf3	100	98.553	ENSPLAG00000018103	prpf3	100	98.553	Poecilia_latipinna
ENSXMAG00000016347	prpf3	100	98.842	ENSPMEG00000023546	prpf3	100	98.842	Poecilia_mexicana
ENSXMAG00000016347	prpf3	100	98.263	ENSPREG00000017216	prpf3	100	98.263	Poecilia_reticulata
ENSXMAG00000016347	prpf3	76	62.689	ENSPPYG00000018646	-	99	63.447	Pongo_abelii
ENSXMAG00000016347	prpf3	93	70.859	ENSPPYG00000000900	PRPF3	99	71.231	Pongo_abelii
ENSXMAG00000016347	prpf3	85	75.455	ENSPCAG00000014908	PRPF3	87	73.432	Procavia_capensis
ENSXMAG00000016347	prpf3	99	71.733	ENSPCOG00000013828	PRPF3	100	72.350	Propithecus_coquereli
ENSXMAG00000016347	prpf3	99	71.060	ENSPVAG00000013472	PRPF3	100	71.490	Pteropus_vampyrus
ENSXMAG00000016347	prpf3	100	86.494	ENSPNYG00000004279	prpf3	100	86.494	Pundamilia_nyererei
ENSXMAG00000016347	prpf3	100	83.360	ENSPNAG00000001799	prpf3	100	83.040	Pygocentrus_nattereri
ENSXMAG00000016347	prpf3	99	72.000	ENSRNOG00000025629	Prpf3	100	71.835	Rattus_norvegicus
ENSXMAG00000016347	prpf3	82	74.265	ENSRBIG00000028854	PRPF3	98	73.529	Rhinopithecus_bieti
ENSXMAG00000016347	prpf3	99	71.875	ENSRROG00000027464	PRPF3	100	72.493	Rhinopithecus_roxellana
ENSXMAG00000016347	prpf3	99	65.625	ENSSBOG00000033104	PRPF3	100	66.189	Saimiri_boliviensis_boliviensis
ENSXMAG00000016347	prpf3	99	71.813	ENSSHAG00000009548	PRPF3	100	72.429	Sarcophilus_harrisii
ENSXMAG00000016347	prpf3	100	83.784	ENSSFOG00015022014	prpf3	100	83.307	Scleropages_formosus
ENSXMAG00000016347	prpf3	100	86.056	ENSSMAG00000015739	prpf3	100	85.915	Scophthalmus_maximus
ENSXMAG00000016347	prpf3	100	83.502	ENSSDUG00000006840	prpf3	100	82.828	Seriola_dumerili
ENSXMAG00000016347	prpf3	100	84.951	ENSSLDG00000015423	prpf3	100	85.232	Seriola_lalandi_dorsalis
ENSXMAG00000016347	prpf3	99	71.875	ENSSARG00000011064	PRPF3	100	72.493	Sorex_araneus
ENSXMAG00000016347	prpf3	99	71.751	ENSSPUG00000000809	PRPF3	100	71.529	Sphenodon_punctatus
ENSXMAG00000016347	prpf3	100	89.984	ENSSPAG00000018721	prpf3	100	89.661	Stegastes_partitus
ENSXMAG00000016347	prpf3	99	71.875	ENSSSCG00000030119	PRPF3	100	75.135	Sus_scrofa
ENSXMAG00000016347	prpf3	99	63.053	ENSTGUG00000004552	PRPF3	100	62.910	Taeniopygia_guttata
ENSXMAG00000016347	prpf3	100	81.792	ENSTRUG00000014923	prpf3	100	81.792	Takifugu_rubripes
ENSXMAG00000016347	prpf3	99	85.870	ENSTNIG00000008058	prpf3	100	81.818	Tetraodon_nigroviridis
ENSXMAG00000016347	prpf3	81	72.336	ENSTBEG00000014072	PRPF3	88	73.636	Tupaia_belangeri
ENSXMAG00000016347	prpf3	99	67.335	ENSTTRG00000010616	PRPF3	100	67.622	Tursiops_truncatus
ENSXMAG00000016347	prpf3	85	75.273	ENSUAMG00000009345	PRPF3	100	75.135	Ursus_americanus
ENSXMAG00000016347	prpf3	99	71.875	ENSUMAG00000003720	PRPF3	100	72.493	Ursus_maritimus
ENSXMAG00000016347	prpf3	89	77.955	ENSVPAG00000005425	PRPF3	89	77.500	Vicugna_pacos
ENSXMAG00000016347	prpf3	99	74.451	ENSVVUG00000007933	PRPF3	100	74.138	Vulpes_vulpes
ENSXMAG00000016347	prpf3	99	71.146	ENSXETG00000018654	prpf3	100	71.146	Xenopus_tropicalis