EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016348 (Gene tree)
Gene ID: 102235174
Gene Symbol: yars
Alias: TyrRS|cb204|wu:fk52b08
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 53551 bases
Position: chr13:18043456-18097006
Accession: 102235174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016394	tRNA_bind	PF01588.20	1.1e-29	1	1
ENSXMAP00000016394	tRNA-synt_1b	PF00579.25	9.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016418	-	4225	XM_005812525	ENSXMAP00000016394	616 (aa)	XP_005812582	M4APJ9

Gene Model

Click here to download ENSXMAG00000016348's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016348	yars	82	78.728	ENSG00000134684	YARS	95	78.131	Homo_sapiens
ENSXMAG00000016348	yars	82	90.079	ENSAPOG00000020788	yars	95	90.476	Acanthochromis_polyacanthus
ENSXMAG00000016348	yars	82	78.728	ENSAMEG00000007476	YARS	95	78.131	Ailuropoda_melanoleuca
ENSXMAG00000016348	yars	82	89.264	ENSACIG00000017504	yars	94	88.867	Amphilophus_citrinellus
ENSXMAG00000016348	yars	82	90.891	ENSAOCG00000009987	yars	95	91.287	Amphiprion_ocellaris
ENSXMAG00000016348	yars	82	90.891	ENSAPEG00000001273	yars	95	91.287	Amphiprion_percula
ENSXMAG00000016348	yars	82	88.911	ENSATEG00000005301	yars	95	89.109	Anabas_testudineus
ENSXMAG00000016348	yars	82	70.495	ENSAPLG00000005739	YARS	95	69.960	Anas_platyrhynchos
ENSXMAG00000016348	yars	82	77.734	ENSACAG00000003568	YARS	95	77.535	Anolis_carolinensis
ENSXMAG00000016348	yars	82	79.125	ENSANAG00000034533	YARS	95	78.529	Aotus_nancymaae
ENSXMAG00000016348	yars	82	88.867	ENSACLG00000004618	yars	94	89.264	Astatotilapia_calliptera
ENSXMAG00000016348	yars	85	82.759	ENSAMXG00000010993	yars	98	82.950	Astyanax_mexicanus
ENSXMAG00000016348	yars	82	78.728	ENSBTAG00000018065	YARS	95	78.330	Bos_taurus
ENSXMAG00000016348	yars	82	78.926	ENSCJAG00000001037	YARS	95	78.330	Callithrix_jacchus
ENSXMAG00000016348	yars	83	78.168	ENSCAFG00000010481	YARS	90	77.344	Canis_familiaris
ENSXMAG00000016348	yars	82	78.770	ENSCAFG00020025379	YARS	95	78.131	Canis_lupus_dingo
ENSXMAG00000016348	yars	82	78.926	ENSCHIG00000014340	YARS	95	78.529	Capra_hircus
ENSXMAG00000016348	yars	82	78.926	ENSTSYG00000005019	YARS	95	78.330	Carlito_syrichta
ENSXMAG00000016348	yars	77	55.136	ENSCAPG00000008627	YARS	100	55.765	Cavia_aperea
ENSXMAG00000016348	yars	83	77.237	ENSCPOG00000009614	YARS	95	73.840	Cavia_porcellus
ENSXMAG00000016348	yars	82	79.365	ENSCCAG00000036757	YARS	92	78.529	Cebus_capucinus
ENSXMAG00000016348	yars	83	78.627	ENSCATG00000044394	YARS	95	78.330	Cercocebus_atys
ENSXMAG00000016348	yars	83	77.626	ENSCLAG00000008977	YARS	90	76.803	Chinchilla_lanigera
ENSXMAG00000016348	yars	82	79.125	ENSCSAG00000001062	YARS	95	78.529	Chlorocebus_sabaeus
ENSXMAG00000016348	yars	79	68.595	ENSCHOG00000003939	YARS	94	67.975	Choloepus_hoffmanni
ENSXMAG00000016348	yars	82	78.131	ENSCPBG00000010998	YARS	95	77.535	Chrysemys_picta_bellii
ENSXMAG00000016348	yars	82	70.611	ENSCING00000005113	-	95	70.611	Ciona_intestinalis
ENSXMAG00000016348	yars	82	66.798	ENSCSAVG00000003706	-	95	66.996	Ciona_savignyi
ENSXMAG00000016348	yars	82	78.529	ENSCANG00000038285	YARS	95	77.932	Colobus_angolensis_palliatus
ENSXMAG00000016348	yars	82	79.406	ENSCGRG00001010863	Yars	94	74.354	Cricetulus_griseus_chok1gshd
ENSXMAG00000016348	yars	82	79.406	ENSCGRG00000007526	Yars	89	78.812	Cricetulus_griseus_crigri
ENSXMAG00000016348	yars	82	88.668	ENSCSEG00000009643	yars	95	87.873	Cynoglossus_semilaevis
ENSXMAG00000016348	yars	82	93.241	ENSCVAG00000016583	yars	95	91.451	Cyprinodon_variegatus
ENSXMAG00000016348	yars	81	85.060	ENSDARG00000035913	yars	100	92.544	Danio_rerio
ENSXMAG00000016348	yars	82	76.575	ENSDNOG00000000536	YARS	96	75.538	Dasypus_novemcinctus
ENSXMAG00000016348	yars	83	77.407	ENSDORG00000011871	Yars	96	76.367	Dipodomys_ordii
ENSXMAG00000016348	yars	85	66.224	FBgn0027080	TyrRS	98	66.224	Drosophila_melanogaster
ENSXMAG00000016348	yars	71	85.600	ENSETEG00000000215	YARS	82	85.600	Echinops_telfairi
ENSXMAG00000016348	yars	84	66.089	ENSEBUG00000004750	yars	98	65.125	Eptatretus_burgeri
ENSXMAG00000016348	yars	83	76.817	ENSEASG00005011762	YARS	91	75.435	Equus_asinus_asinus
ENSXMAG00000016348	yars	83	77.014	ENSECAG00000010015	YARS	66	75.629	Equus_caballus
ENSXMAG00000016348	yars	70	70.213	ENSEEUG00000005992	-	66	71.237	Erinaceus_europaeus
ENSXMAG00000016348	yars	81	87.052	ENSELUG00000017171	yars	94	86.255	Esox_lucius
ENSXMAG00000016348	yars	82	65.010	ENSFCAG00000000704	YARS	94	64.414	Felis_catus
ENSXMAG00000016348	yars	81	77.823	ENSFALG00000000592	YARS	87	76.908	Ficedula_albicollis
ENSXMAG00000016348	yars	83	77.407	ENSFDAG00000006620	YARS	90	76.817	Fukomys_damarensis
ENSXMAG00000016348	yars	82	92.843	ENSFHEG00000022444	yars	95	92.843	Fundulus_heteroclitus
ENSXMAG00000016348	yars	78	82.816	ENSGMOG00000006555	yars	94	82.402	Gadus_morhua
ENSXMAG00000016348	yars	82	77.451	ENSGALG00000003563	YARS	94	76.667	Gallus_gallus
ENSXMAG00000016348	yars	82	89.264	ENSGACG00000008516	yars	95	89.264	Gasterosteus_aculeatus
ENSXMAG00000016348	yars	82	78.529	ENSGAGG00000024290	YARS	95	77.932	Gopherus_agassizii
ENSXMAG00000016348	yars	83	78.082	ENSGGOG00000014013	YARS	95	78.330	Gorilla_gorilla
ENSXMAG00000016348	yars	82	89.328	ENSHBUG00000018909	yars	95	90.316	Haplochromis_burtoni
ENSXMAG00000016348	yars	83	77.148	ENSHGLG00000013843	YARS	90	76.562	Heterocephalus_glaber_female
ENSXMAG00000016348	yars	81	77.666	ENSHGLG00100002785	-	93	77.062	Heterocephalus_glaber_male
ENSXMAG00000016348	yars	59	73.425	ENSHGLG00100020546	-	98	72.603	Heterocephalus_glaber_male
ENSXMAG00000016348	yars	82	84.961	ENSHCOG00000006672	yars	95	84.736	Hippocampus_comes
ENSXMAG00000016348	yars	85	78.161	ENSIPUG00000021749	yars	98	77.969	Ictalurus_punctatus
ENSXMAG00000016348	yars	83	78.558	ENSSTOG00000012031	YARS	90	77.539	Ictidomys_tridecemlineatus
ENSXMAG00000016348	yars	81	79.276	ENSJJAG00000013281	Yars	89	78.427	Jaculus_jaculus
ENSXMAG00000016348	yars	82	91.054	ENSKMAG00000021752	yars	95	91.054	Kryptolebias_marmoratus
ENSXMAG00000016348	yars	82	88.735	ENSLBEG00000024080	yars	95	89.526	Labrus_bergylta
ENSXMAG00000016348	yars	82	76.938	ENSLACG00000015577	YARS	95	76.740	Latimeria_chalumnae
ENSXMAG00000016348	yars	82	81.710	ENSLOCG00000002165	yars	95	81.312	Lepisosteus_oculatus
ENSXMAG00000016348	yars	83	77.821	ENSLAFG00000003786	YARS	92	77.148	Loxodonta_africana
ENSXMAG00000016348	yars	82	73.559	ENSMFAG00000040933	YARS	94	72.962	Macaca_fascicularis
ENSXMAG00000016348	yars	82	78.926	ENSMMUG00000019746	YARS	95	78.330	Macaca_mulatta
ENSXMAG00000016348	yars	72	79.596	ENSMNEG00000031865	YARS	86	78.924	Macaca_nemestrina
ENSXMAG00000016348	yars	82	78.926	ENSMLEG00000041315	YARS	95	78.330	Mandrillus_leucophaeus
ENSXMAG00000016348	yars	82	91.650	ENSMAMG00000006092	yars	95	91.650	Mastacembelus_armatus
ENSXMAG00000016348	yars	82	89.484	ENSMZEG00005011426	yars	95	89.881	Maylandia_zebra
ENSXMAG00000016348	yars	81	75.697	ENSMGAG00000005063	YARS	94	75.896	Meleagris_gallopavo
ENSXMAG00000016348	yars	79	79.303	ENSMAUG00000021126	Yars	94	78.689	Mesocricetus_auratus
ENSXMAG00000016348	yars	84	77.670	ENSMICG00000011204	YARS	97	76.641	Microcebus_murinus
ENSXMAG00000016348	yars	84	76.346	ENSMOCG00000011342	Yars	91	75.769	Microtus_ochrogaster
ENSXMAG00000016348	yars	82	83.698	ENSMMOG00000021133	yars	94	82.704	Mola_mola
ENSXMAG00000016348	yars	81	77.092	ENSMODG00000017404	YARS	94	76.494	Monodelphis_domestica
ENSXMAG00000016348	yars	53	93.009	ENSMALG00000003648	yars	90	92.988	Monopterus_albus
ENSXMAG00000016348	yars	83	78.125	MGP_CAROLIEiJ_G0026513	Yars	90	77.539	Mus_caroli
ENSXMAG00000016348	yars	83	78.516	ENSMUSG00000028811	Yars	90	77.930	Mus_musculus
ENSXMAG00000016348	yars	83	77.344	MGP_PahariEiJ_G0028844	Yars	90	76.758	Mus_pahari
ENSXMAG00000016348	yars	83	78.125	MGP_SPRETEiJ_G0027493	Yars	90	77.539	Mus_spretus
ENSXMAG00000016348	yars	82	79.125	ENSMLUG00000000759	YARS	95	78.529	Myotis_lucifugus
ENSXMAG00000016348	yars	79	79.959	ENSNGAG00000001419	Yars	94	79.339	Nannospalax_galili
ENSXMAG00000016348	yars	82	90.060	ENSNBRG00000020413	yars	94	90.060	Neolamprologus_brichardi
ENSXMAG00000016348	yars	83	77.930	ENSNLEG00000002922	YARS	95	77.932	Nomascus_leucogenys
ENSXMAG00000016348	yars	59	83.537	ENSMEUG00000011824	-	68	83.537	Notamacropus_eugenii
ENSXMAG00000016348	yars	82	72.978	ENSOPRG00000003669	YARS	95	73.559	Ochotona_princeps
ENSXMAG00000016348	yars	83	77.237	ENSODEG00000005363	YARS	90	76.413	Octodon_degus
ENSXMAG00000016348	yars	82	90.514	ENSONIG00000015400	yars	95	91.502	Oreochromis_niloticus
ENSXMAG00000016348	yars	81	72.079	ENSOANG00000011779	YARS	100	72.112	Ornithorhynchus_anatinus
ENSXMAG00000016348	yars	82	79.125	ENSOCUG00000010007	YARS	95	78.529	Oryctolagus_cuniculus
ENSXMAG00000016348	yars	82	89.587	ENSORLG00000013982	yars	96	87.405	Oryzias_latipes
ENSXMAG00000016348	yars	82	89.349	ENSORLG00020020750	yars	95	88.757	Oryzias_latipes_hni
ENSXMAG00000016348	yars	82	88.780	ENSORLG00015008963	yars	95	89.370	Oryzias_latipes_hsok
ENSXMAG00000016348	yars	82	91.124	ENSOMEG00000013016	yars	95	94.872	Oryzias_melastigma
ENSXMAG00000016348	yars	82	78.107	ENSOGAG00000007359	YARS	95	77.515	Otolemur_garnettii
ENSXMAG00000016348	yars	82	78.968	ENSOARG00000020897	YARS	88	78.330	Ovis_aries
ENSXMAG00000016348	yars	82	78.543	ENSPPAG00000035791	YARS	92	79.012	Pan_paniscus
ENSXMAG00000016348	yars	82	78.529	ENSPPRG00000023768	YARS	95	77.932	Panthera_pardus
ENSXMAG00000016348	yars	82	78.529	ENSPTIG00000003438	YARS	95	77.932	Panthera_tigris_altaica
ENSXMAG00000016348	yars	82	78.926	ENSPTRG00000000491	YARS	95	78.330	Pan_troglodytes
ENSXMAG00000016348	yars	82	78.926	ENSPANG00000009804	YARS	95	78.330	Papio_anubis
ENSXMAG00000016348	yars	85	80.916	ENSPKIG00000024596	yars	98	80.534	Paramormyrops_kingsleyae
ENSXMAG00000016348	yars	76	71.306	ENSPSIG00000006945	YARS	88	70.664	Pelodiscus_sinensis
ENSXMAG00000016348	yars	82	89.066	ENSPMGG00000022917	yars	94	88.867	Periophthalmus_magnuspinnatus
ENSXMAG00000016348	yars	84	76.731	ENSPEMG00000010746	Yars	91	76.154	Peromyscus_maniculatus_bairdii
ENSXMAG00000016348	yars	81	78.427	ENSPCIG00000022457	YARS	93	78.024	Phascolarctos_cinereus
ENSXMAG00000016348	yars	82	97.018	ENSPFOG00000014808	yars	95	97.018	Poecilia_formosa
ENSXMAG00000016348	yars	82	97.416	ENSPLAG00000020075	yars	95	97.416	Poecilia_latipinna
ENSXMAG00000016348	yars	82	97.217	ENSPMEG00000002803	yars	95	97.217	Poecilia_mexicana
ENSXMAG00000016348	yars	82	95.626	ENSPREG00000018280	yars	94	95.626	Poecilia_reticulata
ENSXMAG00000016348	yars	82	76.877	ENSPPYG00000001585	YARS	95	76.285	Pongo_abelii
ENSXMAG00000016348	yars	61	76.596	ENSPCAG00000011170	YARS	70	75.798	Procavia_capensis
ENSXMAG00000016348	yars	84	77.282	ENSPCOG00000021026	YARS	97	76.255	Propithecus_coquereli
ENSXMAG00000016348	yars	82	79.324	ENSPVAG00000010984	YARS	95	78.728	Pteropus_vampyrus
ENSXMAG00000016348	yars	82	89.066	ENSPNYG00000000860	yars	94	89.463	Pundamilia_nyererei
ENSXMAG00000016348	yars	85	81.609	ENSPNAG00000009622	yars	98	81.226	Pygocentrus_nattereri
ENSXMAG00000016348	yars	83	78.363	ENSRNOG00000007213	Yars	90	77.539	Rattus_norvegicus
ENSXMAG00000016348	yars	82	78.728	ENSRROG00000039913	YARS	95	78.131	Rhinopithecus_roxellana
ENSXMAG00000016348	yars	82	78.728	ENSSBOG00000030205	YARS	95	78.131	Saimiri_boliviensis_boliviensis
ENSXMAG00000016348	yars	83	75.977	ENSSHAG00000011851	YARS	96	75.781	Sarcophilus_harrisii
ENSXMAG00000016348	yars	81	82.869	ENSSFOG00015007179	yars	94	82.669	Scleropages_formosus
ENSXMAG00000016348	yars	82	86.680	ENSSMAG00000020736	yars	94	86.083	Scophthalmus_maximus
ENSXMAG00000016348	yars	82	90.258	ENSSDUG00000001782	yars	95	90.060	Seriola_dumerili
ENSXMAG00000016348	yars	82	89.662	ENSSLDG00000008268	yars	95	89.861	Seriola_lalandi_dorsalis
ENSXMAG00000016348	yars	69	72.794	ENSSARG00000012227	-	80	72.794	Sorex_araneus
ENSXMAG00000016348	yars	82	78.926	ENSSPUG00000000333	YARS	95	78.529	Sphenodon_punctatus
ENSXMAG00000016348	yars	83	88.867	ENSSPAG00000020632	yars	91	89.258	Stegastes_partitus
ENSXMAG00000016348	yars	82	79.125	ENSSSCG00000030369	YARS	95	78.529	Sus_scrofa
ENSXMAG00000016348	yars	81	77.912	ENSTGUG00000001342	YARS	94	76.908	Taeniopygia_guttata
ENSXMAG00000016348	yars	82	89.066	ENSTRUG00000014099	yars	95	87.674	Takifugu_rubripes
ENSXMAG00000016348	yars	82	86.282	ENSTNIG00000009237	yars	94	86.083	Tetraodon_nigroviridis
ENSXMAG00000016348	yars	79	71.694	ENSTBEG00000014374	YARS	94	71.694	Tupaia_belangeri
ENSXMAG00000016348	yars	82	78.330	ENSTTRG00000014987	YARS	95	77.734	Tursiops_truncatus
ENSXMAG00000016348	yars	83	74.805	ENSUAMG00000000392	YARS	94	73.360	Ursus_americanus
ENSXMAG00000016348	yars	76	75.316	ENSUMAG00000008312	YARS	86	74.423	Ursus_maritimus
ENSXMAG00000016348	yars	82	68.452	ENSVPAG00000010958	YARS	95	68.452	Vicugna_pacos
ENSXMAG00000016348	yars	83	78.168	ENSVVUG00000015468	YARS	94	78.601	Vulpes_vulpes
ENSXMAG00000016348	yars	82	74.751	ENSXETG00000027865	yars	95	74.751	Xenopus_tropicalis