EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016600 (Gene tree)
Gene ID: 102235762
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 15613 bases
Position: chr3:18593235-18608847
Accession: 102235762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016643	MBD	PF01429.19	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016667	-	4979	XM_023331451	ENSXMAP00000016643	1253 (aa)	XP_023187219	M4AQ98

Gene Model

Click here to download ENSXMAG00000016600's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016600	setdb1b	99	68.085	ENSG00000143379	SETDB1	95	67.553	Homo_sapiens
ENSXMAG00000016600	setdb1b	100	80.937	ENSAPOG00000016228	setdb1b	100	80.858	Acanthochromis_polyacanthus
ENSXMAG00000016600	setdb1b	99	69.149	ENSAMEG00000001160	SETDB1	90	68.617	Ailuropoda_melanoleuca
ENSXMAG00000016600	setdb1b	99	78.400	ENSACIG00000007359	setdb1b	99	78.754	Amphilophus_citrinellus
ENSXMAG00000016600	setdb1b	92	82.779	ENSAOCG00000005586	setdb1b	97	82.828	Amphiprion_ocellaris
ENSXMAG00000016600	setdb1b	99	75.584	ENSAPEG00000007774	setdb1b	99	75.584	Amphiprion_percula
ENSXMAG00000016600	setdb1b	100	80.663	ENSATEG00000023520	setdb1b	100	81.230	Anabas_testudineus
ENSXMAG00000016600	setdb1b	98	68.478	ENSAPLG00000013908	SETDB1	90	68.478	Anas_platyrhynchos
ENSXMAG00000016600	setdb1b	99	68.085	ENSANAG00000001819	SETDB1	95	67.553	Aotus_nancymaae
ENSXMAG00000016600	setdb1b	100	78.492	ENSACLG00000020489	setdb1b	100	79.430	Astatotilapia_calliptera
ENSXMAG00000016600	setdb1b	93	73.211	ENSAMXG00000016168	setdb1b	95	75.789	Astyanax_mexicanus
ENSXMAG00000016600	setdb1b	99	70.166	ENSBTAG00000000098	SETDB1	94	69.613	Bos_taurus
ENSXMAG00000016600	setdb1b	99	68.085	ENSCJAG00000006972	SETDB1	95	67.553	Callithrix_jacchus
ENSXMAG00000016600	setdb1b	99	69.149	ENSCAFG00000023501	SETDB1	90	68.617	Canis_familiaris
ENSXMAG00000016600	setdb1b	99	69.149	ENSCAFG00020013596	SETDB1	90	68.617	Canis_lupus_dingo
ENSXMAG00000016600	setdb1b	99	68.617	ENSCHIG00000010698	SETDB1	90	68.085	Capra_hircus
ENSXMAG00000016600	setdb1b	84	56.007	ENSTSYG00000012646	SETDB1	95	55.596	Carlito_syrichta
ENSXMAG00000016600	setdb1b	71	63.636	ENSCAPG00000013619	SETDB1	95	63.636	Cavia_aperea
ENSXMAG00000016600	setdb1b	99	69.149	ENSCPOG00000001632	SETDB1	98	53.472	Cavia_porcellus
ENSXMAG00000016600	setdb1b	99	68.085	ENSCCAG00000024882	SETDB1	90	67.553	Cebus_capucinus
ENSXMAG00000016600	setdb1b	99	68.085	ENSCATG00000044888	SETDB1	98	53.407	Cercocebus_atys
ENSXMAG00000016600	setdb1b	99	68.617	ENSCLAG00000000242	SETDB1	95	68.085	Chinchilla_lanigera
ENSXMAG00000016600	setdb1b	88	67.553	ENSCSAG00000018034	SETDB1	96	67.021	Chlorocebus_sabaeus
ENSXMAG00000016600	setdb1b	95	74.342	ENSCHOG00000004013	SETDB1	87	73.684	Choloepus_hoffmanni
ENSXMAG00000016600	setdb1b	98	70.000	ENSCPBG00000008716	SETDB1	89	68.681	Chrysemys_picta_bellii
ENSXMAG00000016600	setdb1b	83	67.742	ENSCANG00000036388	SETDB1	95	56.775	Colobus_angolensis_palliatus
ENSXMAG00000016600	setdb1b	99	55.014	ENSCGRG00001010822	Setdb1	98	55.179	Cricetulus_griseus_chok1gshd
ENSXMAG00000016600	setdb1b	99	54.830	ENSCGRG00000005953	Setdb1	98	54.720	Cricetulus_griseus_crigri
ENSXMAG00000016600	setdb1b	99	75.101	ENSCSEG00000002988	setdb1b	100	75.200	Cynoglossus_semilaevis
ENSXMAG00000016600	setdb1b	100	89.603	ENSCVAG00000008877	setdb1b	100	90.238	Cyprinodon_variegatus
ENSXMAG00000016600	setdb1b	98	69.114	ENSDARG00000099021	setdb1b	99	69.020	Danio_rerio
ENSXMAG00000016600	setdb1b	63	76.106	ENSDARG00000041243	setdb1a	57	84.848	Danio_rerio
ENSXMAG00000016600	setdb1b	99	68.617	ENSDNOG00000007754	SETDB1	90	68.085	Dasypus_novemcinctus
ENSXMAG00000016600	setdb1b	99	70.718	ENSDORG00000006830	Setdb1	94	70.166	Dipodomys_ordii
ENSXMAG00000016600	setdb1b	68	46.989	ENSEBUG00000005735	setdb1b	95	45.246	Eptatretus_burgeri
ENSXMAG00000016600	setdb1b	99	68.617	ENSEASG00005002061	SETDB1	95	68.085	Equus_asinus_asinus
ENSXMAG00000016600	setdb1b	99	68.617	ENSECAG00000023954	SETDB1	90	68.085	Equus_caballus
ENSXMAG00000016600	setdb1b	77	69.149	ENSEEUG00000015825	SETDB1	71	68.617	Erinaceus_europaeus
ENSXMAG00000016600	setdb1b	77	70.213	ENSELUG00000006204	-	70	70.213	Esox_lucius
ENSXMAG00000016600	setdb1b	90	77.844	ENSELUG00000013948	setdb1b	98	76.540	Esox_lucius
ENSXMAG00000016600	setdb1b	99	69.149	ENSFCAG00000009655	SETDB1	90	68.617	Felis_catus
ENSXMAG00000016600	setdb1b	98	68.617	ENSFDAG00000021515	SETDB1	98	53.593	Fukomys_damarensis
ENSXMAG00000016600	setdb1b	100	90.701	ENSFHEG00000022195	setdb1b	100	91.174	Fundulus_heteroclitus
ENSXMAG00000016600	setdb1b	99	66.023	ENSGMOG00000005993	setdb1b	100	71.338	Gadus_morhua
ENSXMAG00000016600	setdb1b	99	54.012	ENSGALG00000024051	SETDB1	85	69.022	Gallus_gallus
ENSXMAG00000016600	setdb1b	97	97.302	ENSGAFG00000012805	setdb1b	100	97.302	Gambusia_affinis
ENSXMAG00000016600	setdb1b	99	66.616	ENSGACG00000011675	setdb1b	95	78.788	Gasterosteus_aculeatus
ENSXMAG00000016600	setdb1b	98	69.780	ENSGAGG00000005348	SETDB1	89	69.231	Gopherus_agassizii
ENSXMAG00000016600	setdb1b	99	68.085	ENSGGOG00000016308	SETDB1	95	67.553	Gorilla_gorilla
ENSXMAG00000016600	setdb1b	100	78.571	ENSHBUG00000004618	setdb1b	100	79.509	Haplochromis_burtoni
ENSXMAG00000016600	setdb1b	98	68.617	ENSHGLG00000011098	SETDB1	95	68.085	Heterocephalus_glaber_female
ENSXMAG00000016600	setdb1b	98	68.617	ENSHGLG00100009789	SETDB1	95	68.085	Heterocephalus_glaber_male
ENSXMAG00000016600	setdb1b	100	72.742	ENSHCOG00000014567	setdb1b	100	72.349	Hippocampus_comes
ENSXMAG00000016600	setdb1b	98	66.798	ENSIPUG00000004536	setdb1	99	69.875	Ictalurus_punctatus
ENSXMAG00000016600	setdb1b	99	69.149	ENSSTOG00000006770	SETDB1	90	68.617	Ictidomys_tridecemlineatus
ENSXMAG00000016600	setdb1b	99	80.620	ENSKMAG00000001197	setdb1b	100	81.284	Kryptolebias_marmoratus
ENSXMAG00000016600	setdb1b	99	75.868	ENSLBEG00000025862	setdb1b	95	84.180	Labrus_bergylta
ENSXMAG00000016600	setdb1b	100	60.526	ENSLACG00000011159	SETDB1	98	59.211	Latimeria_chalumnae
ENSXMAG00000016600	setdb1b	99	68.617	ENSLAFG00000004006	SETDB1	95	68.085	Loxodonta_africana
ENSXMAG00000016600	setdb1b	99	68.085	ENSMFAG00000042328	SETDB1	95	67.553	Macaca_fascicularis
ENSXMAG00000016600	setdb1b	99	68.085	ENSMMUG00000023235	SETDB1	95	67.553	Macaca_mulatta
ENSXMAG00000016600	setdb1b	99	68.085	ENSMNEG00000017223	SETDB1	95	67.553	Macaca_nemestrina
ENSXMAG00000016600	setdb1b	99	68.085	ENSMLEG00000033050	SETDB1	95	67.553	Mandrillus_leucophaeus
ENSXMAG00000016600	setdb1b	99	81.017	ENSMAMG00000015176	setdb1b	87	81.334	Mastacembelus_armatus
ENSXMAG00000016600	setdb1b	100	78.492	ENSMZEG00005016099	setdb1b	100	79.430	Maylandia_zebra
ENSXMAG00000016600	setdb1b	94	41.673	ENSMGAG00000001018	SETDB1	87	54.023	Meleagris_gallopavo
ENSXMAG00000016600	setdb1b	85	69.681	ENSMAUG00000021391	Setdb1	99	58.362	Mesocricetus_auratus
ENSXMAG00000016600	setdb1b	99	68.617	ENSMICG00000000425	SETDB1	95	68.085	Microcebus_murinus
ENSXMAG00000016600	setdb1b	99	69.681	ENSMOCG00000017407	Setdb1	98	55.058	Microtus_ochrogaster
ENSXMAG00000016600	setdb1b	92	85.066	ENSMMOG00000016162	setdb1b	98	85.212	Mola_mola
ENSXMAG00000016600	setdb1b	98	67.039	ENSMODG00000018821	SETDB1	89	55.545	Monodelphis_domestica
ENSXMAG00000016600	setdb1b	91	81.669	ENSMALG00000007801	setdb1b	98	80.204	Monopterus_albus
ENSXMAG00000016600	setdb1b	99	55.393	MGP_CAROLIEiJ_G0025342	Setdb1	99	54.973	Mus_caroli
ENSXMAG00000016600	setdb1b	99	55.251	ENSMUSG00000015697	Setdb1	99	54.914	Mus_musculus
ENSXMAG00000016600	setdb1b	99	69.149	ENSMPUG00000004298	SETDB1	90	68.617	Mustela_putorius_furo
ENSXMAG00000016600	setdb1b	98	68.617	ENSMLUG00000010486	SETDB1	93	68.085	Myotis_lucifugus
ENSXMAG00000016600	setdb1b	99	68.617	ENSNGAG00000020151	Setdb1	98	53.381	Nannospalax_galili
ENSXMAG00000016600	setdb1b	99	75.920	ENSNBRG00000003147	setdb1b	100	76.297	Neolamprologus_brichardi
ENSXMAG00000016600	setdb1b	99	63.184	ENSNLEG00000009996	SETDB1	90	62.687	Nomascus_leucogenys
ENSXMAG00000016600	setdb1b	97	69.274	ENSMEUG00000000555	-	89	68.333	Notamacropus_eugenii
ENSXMAG00000016600	setdb1b	95	60.544	ENSOPRG00000015349	SETDB1	88	60.403	Ochotona_princeps
ENSXMAG00000016600	setdb1b	99	68.617	ENSODEG00000012471	SETDB1	95	68.085	Octodon_degus
ENSXMAG00000016600	setdb1b	100	78.543	ENSONIG00000006454	setdb1b	100	79.716	Oreochromis_niloticus
ENSXMAG00000016600	setdb1b	97	68.280	ENSOCUG00000003642	SETDB1	90	68.085	Oryctolagus_cuniculus
ENSXMAG00000016600	setdb1b	100	80.142	ENSORLG00000010602	setdb1b	100	80.459	Oryzias_latipes
ENSXMAG00000016600	setdb1b	75	75.869	ENSORLG00020008638	setdb1b	99	76.291	Oryzias_latipes_hni
ENSXMAG00000016600	setdb1b	100	79.827	ENSORLG00015014543	setdb1b	100	80.142	Oryzias_latipes_hsok
ENSXMAG00000016600	setdb1b	100	80.839	ENSOMEG00000009457	setdb1b	99	84.526	Oryzias_melastigma
ENSXMAG00000016600	setdb1b	99	68.617	ENSOGAG00000010320	SETDB1	90	68.085	Otolemur_garnettii
ENSXMAG00000016600	setdb1b	99	68.617	ENSOARG00000020880	SETDB1	90	68.085	Ovis_aries
ENSXMAG00000016600	setdb1b	99	68.085	ENSPPAG00000041015	SETDB1	95	67.553	Pan_paniscus
ENSXMAG00000016600	setdb1b	99	68.617	ENSPPRG00000005462	SETDB1	90	68.085	Panthera_pardus
ENSXMAG00000016600	setdb1b	99	68.617	ENSPTIG00000014233	SETDB1	90	68.085	Panthera_tigris_altaica
ENSXMAG00000016600	setdb1b	99	68.085	ENSPTRG00000001267	SETDB1	95	67.553	Pan_troglodytes
ENSXMAG00000016600	setdb1b	99	68.085	ENSPANG00000020214	SETDB1	95	67.553	Papio_anubis
ENSXMAG00000016600	setdb1b	99	64.502	ENSPKIG00000010963	setdb1b	100	64.675	Paramormyrops_kingsleyae
ENSXMAG00000016600	setdb1b	53	57.564	ENSPSIG00000008407	SETDB1	82	62.791	Pelodiscus_sinensis
ENSXMAG00000016600	setdb1b	92	68.617	ENSPEMG00000010553	Setdb1	100	54.981	Peromyscus_maniculatus_bairdii
ENSXMAG00000016600	setdb1b	99	65.000	ENSPMAG00000001573	setdb1b	79	64.286	Petromyzon_marinus
ENSXMAG00000016600	setdb1b	99	92.823	ENSPFOG00000004429	setdb1b	99	92.903	Poecilia_formosa
ENSXMAG00000016600	setdb1b	99	83.977	ENSPFOG00000004623	-	94	82.257	Poecilia_formosa
ENSXMAG00000016600	setdb1b	99	97.360	ENSPLAG00000019076	-	100	97.360	Poecilia_latipinna
ENSXMAG00000016600	setdb1b	97	97.209	ENSPLAG00000017117	setdb1b	100	97.209	Poecilia_latipinna
ENSXMAG00000016600	setdb1b	100	96.982	ENSPMEG00000006468	setdb1b	100	96.982	Poecilia_mexicana
ENSXMAG00000016600	setdb1b	100	96.672	ENSPREG00000017459	setdb1b	100	96.672	Poecilia_reticulata
ENSXMAG00000016600	setdb1b	99	68.085	ENSPPYG00000000887	SETDB1	95	67.553	Pongo_abelii
ENSXMAG00000016600	setdb1b	84	55.545	ENSPCAG00000002527	SETDB1	90	55.956	Procavia_capensis
ENSXMAG00000016600	setdb1b	99	68.617	ENSPCOG00000027869	SETDB1	95	68.085	Propithecus_coquereli
ENSXMAG00000016600	setdb1b	97	57.979	ENSPVAG00000004355	SETDB1	85	57.447	Pteropus_vampyrus
ENSXMAG00000016600	setdb1b	94	79.249	ENSPNYG00000003997	setdb1b	98	79.249	Pundamilia_nyererei
ENSXMAG00000016600	setdb1b	98	67.863	ENSPNAG00000021617	setdb1b	99	67.218	Pygocentrus_nattereri
ENSXMAG00000016600	setdb1b	91	41.493	ENSPNAG00000003444	setdb1a	67	82.474	Pygocentrus_nattereri
ENSXMAG00000016600	setdb1b	99	54.839	ENSRNOG00000021143	Setdb1	99	52.792	Rattus_norvegicus
ENSXMAG00000016600	setdb1b	99	68.085	ENSRBIG00000042359	SETDB1	95	67.553	Rhinopithecus_bieti
ENSXMAG00000016600	setdb1b	99	68.085	ENSRROG00000032628	SETDB1	95	67.553	Rhinopithecus_roxellana
ENSXMAG00000016600	setdb1b	99	68.085	ENSSBOG00000028608	SETDB1	95	67.553	Saimiri_boliviensis_boliviensis
ENSXMAG00000016600	setdb1b	99	65.729	ENSSFOG00015022183	setdb1	99	65.630	Scleropages_formosus
ENSXMAG00000016600	setdb1b	100	78.450	ENSSMAG00000015398	setdb1b	100	78.699	Scophthalmus_maximus
ENSXMAG00000016600	setdb1b	100	82.884	ENSSDUG00000007513	setdb1b	100	82.171	Seriola_dumerili
ENSXMAG00000016600	setdb1b	100	82.567	ENSSLDG00000015209	setdb1b	100	82.409	Seriola_lalandi_dorsalis
ENSXMAG00000016600	setdb1b	100	56.855	ENSSPUG00000002969	SETDB1	95	56.855	Sphenodon_punctatus
ENSXMAG00000016600	setdb1b	98	68.617	ENSSSCG00000006645	SETDB1	90	68.085	Sus_scrofa
ENSXMAG00000016600	setdb1b	93	68.681	ENSTGUG00000004684	SETDB1	90	66.492	Taeniopygia_guttata
ENSXMAG00000016600	setdb1b	99	72.829	ENSTRUG00000014641	setdb1b	99	73.046	Takifugu_rubripes
ENSXMAG00000016600	setdb1b	99	66.843	ENSTNIG00000008065	setdb1b	99	68.623	Tetraodon_nigroviridis
ENSXMAG00000016600	setdb1b	93	68.617	ENSTBEG00000009306	SETDB1	91	68.085	Tupaia_belangeri
ENSXMAG00000016600	setdb1b	84	68.617	ENSTTRG00000006966	SETDB1	77	68.085	Tursiops_truncatus
ENSXMAG00000016600	setdb1b	99	69.149	ENSUAMG00000026724	SETDB1	90	68.617	Ursus_americanus
ENSXMAG00000016600	setdb1b	99	69.149	ENSUMAG00000003141	SETDB1	90	68.617	Ursus_maritimus
ENSXMAG00000016600	setdb1b	79	59.086	ENSVPAG00000005440	SETDB1	75	59.259	Vicugna_pacos
ENSXMAG00000016600	setdb1b	99	69.149	ENSVVUG00000011637	SETDB1	90	68.617	Vulpes_vulpes
ENSXMAG00000016600	setdb1b	98	71.429	ENSXETG00000008936	setdb1	89	70.492	Xenopus_tropicalis
ENSXMAG00000016600	setdb1b	99	89.950	ENSXCOG00000019497	setdb1b	91	91.176	Xiphophorus_couchianus