EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016703 (Gene tree)
Gene ID: 102227964
Gene Symbol: a1cf
Alias: acf
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13291 bases
Position: chr10:17771301-17784591
Accession: 102227964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000016750	DND1_DSRM	PF14709.7	5.5e-26	1	1
ENSXMAP00000016750	RRM_1	PF00076.22	8.3e-40	1	3
ENSXMAP00000016750	RRM_1	PF00076.22	8.3e-40	2	3
ENSXMAP00000016750	RRM_1	PF00076.22	8.3e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000016774	-	3790	XM_005806726	ENSXMAP00000016750	610 (aa)	XP_005806783	M4AQK5

Gene Model

Click here to download ENSXMAG00000016703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016703	a1cf	100	78.033	ENSG00000148584	A1CF	100	86.634	Homo_sapiens
ENSXMAG00000016703	a1cf	100	84.918	ENSAPOG00000008259	a1cf	100	85.191	Acanthochromis_polyacanthus
ENSXMAG00000016703	a1cf	100	76.885	ENSAMEG00000000523	A1CF	100	76.721	Ailuropoda_melanoleuca
ENSXMAG00000016703	a1cf	100	87.480	ENSACIG00000008632	a1cf	100	88.943	Amphilophus_citrinellus
ENSXMAG00000016703	a1cf	100	86.438	ENSAOCG00000023744	a1cf	100	87.459	Amphiprion_ocellaris
ENSXMAG00000016703	a1cf	100	87.582	ENSAPEG00000009537	a1cf	100	88.599	Amphiprion_percula
ENSXMAG00000016703	a1cf	100	89.902	ENSATEG00000013720	a1cf	100	90.065	Anabas_testudineus
ENSXMAG00000016703	a1cf	100	78.033	ENSAPLG00000002964	A1CF	100	77.049	Anas_platyrhynchos
ENSXMAG00000016703	a1cf	100	76.721	ENSACAG00000015269	A1CF	100	76.721	Anolis_carolinensis
ENSXMAG00000016703	a1cf	100	77.869	ENSANAG00000019974	A1CF	100	76.557	Aotus_nancymaae
ENSXMAG00000016703	a1cf	100	84.878	ENSACLG00000017428	a1cf	100	85.528	Astatotilapia_calliptera
ENSXMAG00000016703	a1cf	100	77.362	ENSAMXG00000018180	a1cf	100	77.362	Astyanax_mexicanus
ENSXMAG00000016703	a1cf	100	77.377	ENSBTAG00000021195	A1CF	100	76.721	Bos_taurus
ENSXMAG00000016703	a1cf	100	78.852	ENSCJAG00000005045	A1CF	100	77.541	Callithrix_jacchus
ENSXMAG00000016703	a1cf	100	77.541	ENSCAFG00000015581	A1CF	100	76.557	Canis_familiaris
ENSXMAG00000016703	a1cf	100	77.541	ENSCAFG00020026421	A1CF	98	82.274	Canis_lupus_dingo
ENSXMAG00000016703	a1cf	100	79.016	ENSCHIG00000020411	A1CF	100	78.361	Capra_hircus
ENSXMAG00000016703	a1cf	94	78.125	ENSTSYG00000001755	A1CF	100	76.042	Carlito_syrichta
ENSXMAG00000016703	a1cf	100	73.178	ENSCAPG00000017386	A1CF	100	75.080	Cavia_aperea
ENSXMAG00000016703	a1cf	100	77.705	ENSCPOG00000009807	A1CF	100	76.557	Cavia_porcellus
ENSXMAG00000016703	a1cf	100	78.852	ENSCCAG00000018168	A1CF	100	77.377	Cebus_capucinus
ENSXMAG00000016703	a1cf	100	77.049	ENSCATG00000043715	A1CF	100	76.066	Cercocebus_atys
ENSXMAG00000016703	a1cf	100	77.541	ENSCLAG00000010424	A1CF	100	76.557	Chinchilla_lanigera
ENSXMAG00000016703	a1cf	100	78.033	ENSCSAG00000007032	A1CF	100	77.049	Chlorocebus_sabaeus
ENSXMAG00000016703	a1cf	98	74.295	ENSCHOG00000009089	A1CF	98	73.300	Choloepus_hoffmanni
ENSXMAG00000016703	a1cf	100	78.525	ENSCPBG00000026464	A1CF	100	77.213	Chrysemys_picta_bellii
ENSXMAG00000016703	a1cf	100	78.197	ENSCANG00000038032	A1CF	100	77.213	Colobus_angolensis_palliatus
ENSXMAG00000016703	a1cf	100	77.705	ENSCGRG00001017413	A1cf	100	76.885	Cricetulus_griseus_chok1gshd
ENSXMAG00000016703	a1cf	100	77.049	ENSCGRG00000017332	A1cf	100	76.230	Cricetulus_griseus_crigri
ENSXMAG00000016703	a1cf	100	86.088	ENSCSEG00000002361	a1cf	100	86.088	Cynoglossus_semilaevis
ENSXMAG00000016703	a1cf	100	93.322	ENSCVAG00000010520	a1cf	100	94.300	Cyprinodon_variegatus
ENSXMAG00000016703	a1cf	100	82.131	ENSDARG00000002968	a1cf	100	81.967	Danio_rerio
ENSXMAG00000016703	a1cf	100	78.033	ENSDNOG00000002829	A1CF	100	77.213	Dasypus_novemcinctus
ENSXMAG00000016703	a1cf	81	84.420	ENSETEG00000012527	A1CF	81	84.420	Echinops_telfairi
ENSXMAG00000016703	a1cf	100	78.232	ENSEASG00005012924	A1CF	100	77.250	Equus_asinus_asinus
ENSXMAG00000016703	a1cf	100	77.905	ENSECAG00000010424	A1CF	100	76.923	Equus_caballus
ENSXMAG00000016703	a1cf	79	67.083	ENSEEUG00000000013	A1CF	97	66.883	Erinaceus_europaeus
ENSXMAG00000016703	a1cf	100	83.115	ENSELUG00000003159	a1cf	100	83.115	Esox_lucius
ENSXMAG00000016703	a1cf	100	76.230	ENSFCAG00000011179	A1CF	100	75.574	Felis_catus
ENSXMAG00000016703	a1cf	100	77.541	ENSFALG00000013183	A1CF	100	76.393	Ficedula_albicollis
ENSXMAG00000016703	a1cf	100	77.049	ENSFDAG00000019371	A1CF	100	76.066	Fukomys_damarensis
ENSXMAG00000016703	a1cf	100	86.808	ENSFHEG00000019652	a1cf	96	95.312	Fundulus_heteroclitus
ENSXMAG00000016703	a1cf	100	80.164	ENSGMOG00000018943	a1cf	100	79.016	Gadus_morhua
ENSXMAG00000016703	a1cf	95	77.990	ENSGALG00000003765	A1CF	96	76.776	Gallus_gallus
ENSXMAG00000016703	a1cf	100	90.164	ENSGAFG00000014868	a1cf	100	90.164	Gambusia_affinis
ENSXMAG00000016703	a1cf	100	87.869	ENSGACG00000010241	a1cf	100	88.197	Gasterosteus_aculeatus
ENSXMAG00000016703	a1cf	96	77.436	ENSGAGG00000016508	A1CF	98	75.939	Gopherus_agassizii
ENSXMAG00000016703	a1cf	100	78.033	ENSGGOG00000009670	A1CF	100	77.049	Gorilla_gorilla
ENSXMAG00000016703	a1cf	100	87.642	ENSHBUG00000021959	a1cf	100	89.106	Haplochromis_burtoni
ENSXMAG00000016703	a1cf	100	78.361	ENSHGLG00000008955	A1CF	100	77.541	Heterocephalus_glaber_female
ENSXMAG00000016703	a1cf	100	77.705	ENSHGLG00100000518	A1CF	100	76.885	Heterocephalus_glaber_male
ENSXMAG00000016703	a1cf	100	75.728	ENSHCOG00000017669	a1cf	100	77.670	Hippocampus_comes
ENSXMAG00000016703	a1cf	89	84.815	ENSIPUG00000010367	a1cf	95	84.815	Ictalurus_punctatus
ENSXMAG00000016703	a1cf	100	90.113	ENSKMAG00000006568	a1cf	100	90.924	Kryptolebias_marmoratus
ENSXMAG00000016703	a1cf	99	89.739	ENSLBEG00000020994	a1cf	99	89.577	Labrus_bergylta
ENSXMAG00000016703	a1cf	100	78.361	ENSLACG00000008061	A1CF	100	77.377	Latimeria_chalumnae
ENSXMAG00000016703	a1cf	100	83.443	ENSLOCG00000006302	a1cf	100	82.459	Lepisosteus_oculatus
ENSXMAG00000016703	a1cf	100	78.361	ENSLAFG00000015462	A1CF	100	78.033	Loxodonta_africana
ENSXMAG00000016703	a1cf	100	77.049	ENSMFAG00000035948	A1CF	100	76.066	Macaca_fascicularis
ENSXMAG00000016703	a1cf	100	77.049	ENSMMUG00000007077	A1CF	100	76.066	Macaca_mulatta
ENSXMAG00000016703	a1cf	100	76.885	ENSMNEG00000031454	A1CF	100	75.902	Macaca_nemestrina
ENSXMAG00000016703	a1cf	100	78.197	ENSMLEG00000037223	A1CF	100	77.213	Mandrillus_leucophaeus
ENSXMAG00000016703	a1cf	100	88.216	ENSMAMG00000010402	a1cf	100	88.543	Mastacembelus_armatus
ENSXMAG00000016703	a1cf	100	87.541	ENSMZEG00005013245	a1cf	100	87.541	Maylandia_zebra
ENSXMAG00000016703	a1cf	100	77.414	ENSMGAG00000001507	A1CF	100	76.268	Meleagris_gallopavo
ENSXMAG00000016703	a1cf	100	77.213	ENSMAUG00000007422	A1cf	100	76.557	Mesocricetus_auratus
ENSXMAG00000016703	a1cf	100	76.307	ENSMICG00000003377	A1CF	100	76.144	Microcebus_murinus
ENSXMAG00000016703	a1cf	100	77.377	ENSMOCG00000021536	A1cf	100	76.393	Microtus_ochrogaster
ENSXMAG00000016703	a1cf	100	76.059	ENSMMOG00000009422	a1cf	100	76.384	Mola_mola
ENSXMAG00000016703	a1cf	89	78.373	ENSMODG00000016478	A1CF	97	78.004	Monodelphis_domestica
ENSXMAG00000016703	a1cf	100	79.316	ENSMALG00000012992	a1cf	100	79.153	Monopterus_albus
ENSXMAG00000016703	a1cf	100	77.377	MGP_CAROLIEiJ_G0022873	A1cf	100	76.393	Mus_caroli
ENSXMAG00000016703	a1cf	100	77.377	ENSMUSG00000052595	A1cf	99	82.292	Mus_musculus
ENSXMAG00000016703	a1cf	100	76.557	MGP_PahariEiJ_G0014366	A1cf	100	75.574	Mus_pahari
ENSXMAG00000016703	a1cf	100	77.213	MGP_SPRETEiJ_G0023792	A1cf	100	76.230	Mus_spretus
ENSXMAG00000016703	a1cf	100	72.951	ENSMPUG00000016971	A1CF	100	71.803	Mustela_putorius_furo
ENSXMAG00000016703	a1cf	100	77.541	ENSMLUG00000016071	A1CF	100	77.049	Myotis_lucifugus
ENSXMAG00000016703	a1cf	100	78.197	ENSNGAG00000015136	A1cf	100	77.049	Nannospalax_galili
ENSXMAG00000016703	a1cf	100	88.130	ENSNBRG00000001712	a1cf	100	89.593	Neolamprologus_brichardi
ENSXMAG00000016703	a1cf	100	78.689	ENSNLEG00000012028	A1CF	100	77.705	Nomascus_leucogenys
ENSXMAG00000016703	a1cf	94	77.083	ENSMEUG00000015909	A1CF	100	76.042	Notamacropus_eugenii
ENSXMAG00000016703	a1cf	88	71.136	ENSOPRG00000010667	A1CF	100	68.694	Ochotona_princeps
ENSXMAG00000016703	a1cf	100	88.455	ENSONIG00000019105	a1cf	100	88.943	Oreochromis_niloticus
ENSXMAG00000016703	a1cf	78	77.871	ENSOANG00000007360	A1CF	99	77.871	Ornithorhynchus_anatinus
ENSXMAG00000016703	a1cf	100	76.230	ENSOCUG00000011587	A1CF	100	75.246	Oryctolagus_cuniculus
ENSXMAG00000016703	a1cf	100	85.505	ENSORLG00000013342	a1cf	100	85.691	Oryzias_latipes
ENSXMAG00000016703	a1cf	100	88.130	ENSORLG00020000586	a1cf	100	88.455	Oryzias_latipes_hni
ENSXMAG00000016703	a1cf	100	88.130	ENSORLG00015018569	a1cf	100	88.455	Oryzias_latipes_hsok
ENSXMAG00000016703	a1cf	100	87.418	ENSOMEG00000013531	a1cf	100	87.418	Oryzias_melastigma
ENSXMAG00000016703	a1cf	100	77.049	ENSOGAG00000012884	A1CF	100	76.885	Otolemur_garnettii
ENSXMAG00000016703	a1cf	100	78.689	ENSOARG00000013695	A1CF	100	78.033	Ovis_aries
ENSXMAG00000016703	a1cf	95	77.720	ENSPPAG00000028115	A1CF	99	80.632	Pan_paniscus
ENSXMAG00000016703	a1cf	100	77.377	ENSPPRG00000012180	A1CF	100	76.721	Panthera_pardus
ENSXMAG00000016703	a1cf	100	77.377	ENSPTIG00000021223	A1CF	100	76.721	Panthera_tigris_altaica
ENSXMAG00000016703	a1cf	100	78.033	ENSPTRG00000002508	A1CF	100	77.049	Pan_troglodytes
ENSXMAG00000016703	a1cf	100	77.049	ENSPANG00000021988	A1CF	100	76.066	Papio_anubis
ENSXMAG00000016703	a1cf	100	81.803	ENSPKIG00000025176	a1cf	100	81.803	Paramormyrops_kingsleyae
ENSXMAG00000016703	a1cf	100	77.213	ENSPSIG00000010318	A1CF	100	76.066	Pelodiscus_sinensis
ENSXMAG00000016703	a1cf	98	70.333	ENSPMGG00000013359	a1cf	99	70.248	Periophthalmus_magnuspinnatus
ENSXMAG00000016703	a1cf	100	77.869	ENSPEMG00000015021	A1cf	100	76.885	Peromyscus_maniculatus_bairdii
ENSXMAG00000016703	a1cf	100	76.721	ENSPCIG00000002175	A1CF	100	76.393	Phascolarctos_cinereus
ENSXMAG00000016703	a1cf	100	97.883	ENSPFOG00000006683	a1cf	100	97.883	Poecilia_formosa
ENSXMAG00000016703	a1cf	100	97.883	ENSPFOG00000007437	-	100	97.883	Poecilia_formosa
ENSXMAG00000016703	a1cf	100	96.417	ENSPLAG00000001210	-	100	96.417	Poecilia_latipinna
ENSXMAG00000016703	a1cf	100	96.417	ENSPLAG00000000026	a1cf	100	96.417	Poecilia_latipinna
ENSXMAG00000016703	a1cf	100	87.622	ENSPMEG00000015529	-	100	88.274	Poecilia_mexicana
ENSXMAG00000016703	a1cf	100	86.319	ENSPMEG00000000921	a1cf	100	86.971	Poecilia_mexicana
ENSXMAG00000016703	a1cf	100	97.394	ENSPREG00000016298	a1cf	100	97.394	Poecilia_reticulata
ENSXMAG00000016703	a1cf	100	77.541	ENSPPYG00000002819	A1CF	100	76.557	Pongo_abelii
ENSXMAG00000016703	a1cf	80	61.191	ENSPCAG00000006463	A1CF	79	61.191	Procavia_capensis
ENSXMAG00000016703	a1cf	100	77.377	ENSPCOG00000024172	A1CF	100	77.049	Propithecus_coquereli
ENSXMAG00000016703	a1cf	100	89.268	ENSPNYG00000017944	a1cf	100	90.732	Pundamilia_nyererei
ENSXMAG00000016703	a1cf	100	82.680	ENSPNAG00000007704	a1cf	100	82.843	Pygocentrus_nattereri
ENSXMAG00000016703	a1cf	100	76.557	ENSRNOG00000033195	A1cf	100	75.574	Rattus_norvegicus
ENSXMAG00000016703	a1cf	100	72.876	ENSRBIG00000042892	A1CF	100	73.905	Rhinopithecus_bieti
ENSXMAG00000016703	a1cf	100	78.197	ENSRROG00000041398	A1CF	100	77.213	Rhinopithecus_roxellana
ENSXMAG00000016703	a1cf	100	78.852	ENSSBOG00000021930	A1CF	100	77.869	Saimiri_boliviensis_boliviensis
ENSXMAG00000016703	a1cf	100	77.705	ENSSHAG00000005096	A1CF	100	76.721	Sarcophilus_harrisii
ENSXMAG00000016703	a1cf	100	82.190	ENSSFOG00015011774	a1cf	100	82.353	Scleropages_formosus
ENSXMAG00000016703	a1cf	100	88.636	ENSSMAG00000013271	a1cf	100	89.123	Scophthalmus_maximus
ENSXMAG00000016703	a1cf	100	90.656	ENSSDUG00000013930	a1cf	100	90.656	Seriola_dumerili
ENSXMAG00000016703	a1cf	100	82.459	ENSSLDG00000004290	a1cf	100	82.459	Seriola_lalandi_dorsalis
ENSXMAG00000016703	a1cf	95	68.912	ENSSARG00000005940	A1CF	95	68.912	Sorex_araneus
ENSXMAG00000016703	a1cf	95	77.108	ENSSPUG00000006797	A1CF	95	75.685	Sphenodon_punctatus
ENSXMAG00000016703	a1cf	100	78.689	ENSSSCG00000010431	A1CF	100	77.869	Sus_scrofa
ENSXMAG00000016703	a1cf	100	79.051	ENSTGUG00000005090	A1CF	100	78.069	Taeniopygia_guttata
ENSXMAG00000016703	a1cf	100	87.480	ENSTRUG00000001982	a1cf	100	88.130	Takifugu_rubripes
ENSXMAG00000016703	a1cf	100	86.851	ENSTNIG00000003580	a1cf	100	86.851	Tetraodon_nigroviridis
ENSXMAG00000016703	a1cf	95	73.057	ENSTTRG00000013190	A1CF	94	72.366	Tursiops_truncatus
ENSXMAG00000016703	a1cf	100	76.557	ENSUAMG00000020065	A1CF	100	75.410	Ursus_americanus
ENSXMAG00000016703	a1cf	100	77.213	ENSUMAG00000011162	A1CF	100	76.230	Ursus_maritimus
ENSXMAG00000016703	a1cf	87	74.345	ENSVPAG00000006130	A1CF	86	73.221	Vicugna_pacos
ENSXMAG00000016703	a1cf	100	76.721	ENSVVUG00000002504	A1CF	100	75.574	Vulpes_vulpes
ENSXMAG00000016703	a1cf	100	73.279	ENSXETG00000006611	a1cf	100	73.115	Xenopus_tropicalis
ENSXMAG00000016703	a1cf	100	98.689	ENSXCOG00000003302	a1cf	100	98.689	Xiphophorus_couchianus