EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000016984 (Gene tree)
Gene ID: 102232516
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13697 bases
Position: chr2:21113033-21126729
Accession: 102232516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000029199	RRM_1	PF00076.22	6.6e-05	1	1
ENSXMAP00000017028	RRM_1	PF00076.22	8.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017052	-	4542	XM_023352187	ENSXMAP00000017028	800 (aa)	XP_023207955	M4ARD3
ENSXMAT00000038463	-	2130	-	ENSXMAP00000029199	709 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000016984's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000016984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000016984	cnot4a	91	90.566	ENSG00000080802	CNOT4	99	90.566	Homo_sapiens
ENSXMAG00000016984	cnot4a	94	97.445	ENSAPOG00000016272	cnot4a	98	98.519	Acanthochromis_polyacanthus
ENSXMAG00000016984	cnot4a	92	87.387	ENSAMEG00000012081	CNOT4	92	87.387	Ailuropoda_melanoleuca
ENSXMAG00000016984	cnot4a	100	97.445	ENSACIG00000003011	cnot4a	100	90.660	Amphilophus_citrinellus
ENSXMAG00000016984	cnot4a	100	97.080	ENSAOCG00000010792	cnot4a	100	98.148	Amphiprion_ocellaris
ENSXMAG00000016984	cnot4a	100	97.080	ENSAPEG00000004680	cnot4a	100	98.148	Amphiprion_percula
ENSXMAG00000016984	cnot4a	100	97.080	ENSATEG00000017580	cnot4a	100	98.148	Anabas_testudineus
ENSXMAG00000016984	cnot4a	100	68.505	ENSAPLG00000016441	CNOT4	100	68.137	Anas_platyrhynchos
ENSXMAG00000016984	cnot4a	100	68.221	ENSACAG00000011154	CNOT4	100	67.853	Anolis_carolinensis
ENSXMAG00000016984	cnot4a	91	90.566	ENSANAG00000032156	CNOT4	99	90.566	Aotus_nancymaae
ENSXMAG00000016984	cnot4a	100	97.802	ENSACLG00000002514	cnot4a	100	98.519	Astatotilapia_calliptera
ENSXMAG00000016984	cnot4a	85	95.185	ENSAMXG00000001373	cnot4a	100	95.185	Astyanax_mexicanus
ENSXMAG00000016984	cnot4a	100	91.941	ENSAMXG00000011473	cnot4b	100	92.222	Astyanax_mexicanus
ENSXMAG00000016984	cnot4a	100	70.845	ENSBTAG00000017919	CNOT4	100	72.300	Bos_taurus
ENSXMAG00000016984	cnot4a	91	90.566	ENSCJAG00000012532	CNOT4	99	90.566	Callithrix_jacchus
ENSXMAG00000016984	cnot4a	91	90.566	ENSCAFG00000003223	CNOT4	99	90.566	Canis_familiaris
ENSXMAG00000016984	cnot4a	84	90.566	ENSCAFG00020000093	CNOT4	99	90.566	Canis_lupus_dingo
ENSXMAG00000016984	cnot4a	84	90.566	ENSCHIG00000010955	CNOT4	99	90.566	Capra_hircus
ENSXMAG00000016984	cnot4a	91	90.566	ENSTSYG00000000893	CNOT4	99	90.566	Carlito_syrichta
ENSXMAG00000016984	cnot4a	91	90.189	ENSCAPG00000006213	CNOT4	99	90.189	Cavia_aperea
ENSXMAG00000016984	cnot4a	91	90.566	ENSCPOG00000011526	CNOT4	99	90.566	Cavia_porcellus
ENSXMAG00000016984	cnot4a	100	70.845	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSXMAG00000016984	cnot4a	100	71.117	ENSCATG00000022607	CNOT4	97	82.742	Cercocebus_atys
ENSXMAG00000016984	cnot4a	91	90.566	ENSCLAG00000001857	CNOT4	99	90.566	Chinchilla_lanigera
ENSXMAG00000016984	cnot4a	91	90.566	ENSCSAG00000009096	CNOT4	99	90.566	Chlorocebus_sabaeus
ENSXMAG00000016984	cnot4a	66	93.583	ENSCHOG00000010412	CNOT4	67	93.583	Choloepus_hoffmanni
ENSXMAG00000016984	cnot4a	100	72.480	ENSCPBG00000004959	CNOT4	100	71.293	Chrysemys_picta_bellii
ENSXMAG00000016984	cnot4a	66	68.699	ENSCING00000004364	-	66	68.699	Ciona_intestinalis
ENSXMAG00000016984	cnot4a	100	71.253	ENSCANG00000029319	CNOT4	93	90.566	Colobus_angolensis_palliatus
ENSXMAG00000016984	cnot4a	91	90.566	ENSCGRG00001014651	Cnot4	99	90.566	Cricetulus_griseus_chok1gshd
ENSXMAG00000016984	cnot4a	91	90.566	ENSCGRG00000005727	Cnot4	99	90.566	Cricetulus_griseus_crigri
ENSXMAG00000016984	cnot4a	95	97.445	ENSCSEG00000015080	cnot4a	94	98.519	Cynoglossus_semilaevis
ENSXMAG00000016984	cnot4a	100	97.436	ENSCVAG00000009399	cnot4a	100	97.436	Cyprinodon_variegatus
ENSXMAG00000016984	cnot4a	100	76.332	ENSDARG00000007045	cnot4a	100	76.704	Danio_rerio
ENSXMAG00000016984	cnot4a	100	89.964	ENSDARG00000007639	cnot4b	93	89.964	Danio_rerio
ENSXMAG00000016984	cnot4a	100	70.941	ENSDNOG00000009409	CNOT4	100	70.668	Dasypus_novemcinctus
ENSXMAG00000016984	cnot4a	100	72.503	ENSDORG00000012268	Cnot4	100	72.822	Dipodomys_ordii
ENSXMAG00000016984	cnot4a	96	69.830	ENSETEG00000013407	CNOT4	94	67.804	Echinops_telfairi
ENSXMAG00000016984	cnot4a	100	68.182	ENSEASG00005014430	CNOT4	100	72.474	Equus_asinus_asinus
ENSXMAG00000016984	cnot4a	100	71.253	ENSECAG00000020262	CNOT4	100	72.474	Equus_caballus
ENSXMAG00000016984	cnot4a	96	89.416	ENSELUG00000011540	cnot4b	95	90.037	Esox_lucius
ENSXMAG00000016984	cnot4a	99	93.455	ENSELUG00000008742	cnot4a	91	93.455	Esox_lucius
ENSXMAG00000016984	cnot4a	91	90.566	ENSFCAG00000011904	CNOT4	99	90.566	Felis_catus
ENSXMAG00000016984	cnot4a	100	68.750	ENSFALG00000011194	CNOT4	100	68.260	Ficedula_albicollis
ENSXMAG00000016984	cnot4a	91	90.566	ENSFDAG00000013525	CNOT4	99	90.566	Fukomys_damarensis
ENSXMAG00000016984	cnot4a	100	98.168	ENSFHEG00000006608	cnot4a	100	97.122	Fundulus_heteroclitus
ENSXMAG00000016984	cnot4a	96	75.251	ENSGMOG00000001329	cnot4a	100	75.819	Gadus_morhua
ENSXMAG00000016984	cnot4a	100	71.935	ENSGALG00000011682	CNOT4	100	70.981	Gallus_gallus
ENSXMAG00000016984	cnot4a	100	98.168	ENSGACG00000004276	cnot4a	100	98.889	Gasterosteus_aculeatus
ENSXMAG00000016984	cnot4a	91	89.299	ENSGAGG00000017331	CNOT4	99	89.299	Gopherus_agassizii
ENSXMAG00000016984	cnot4a	84	90.047	ENSGGOG00000000142	CNOT4	98	90.047	Gorilla_gorilla
ENSXMAG00000016984	cnot4a	100	97.802	ENSHBUG00000000027	cnot4a	100	98.519	Haplochromis_burtoni
ENSXMAG00000016984	cnot4a	91	90.566	ENSHGLG00000011533	CNOT4	99	90.566	Heterocephalus_glaber_female
ENSXMAG00000016984	cnot4a	73	74.542	ENSHGLG00100013058	CNOT4	94	74.359	Heterocephalus_glaber_male
ENSXMAG00000016984	cnot4a	99	95.971	ENSHCOG00000015815	cnot4a	99	98.113	Hippocampus_comes
ENSXMAG00000016984	cnot4a	100	91.241	ENSIPUG00000016994	cnot4b	100	91.852	Ictalurus_punctatus
ENSXMAG00000016984	cnot4a	100	86.755	ENSIPUG00000006393	cnot4	100	94.444	Ictalurus_punctatus
ENSXMAG00000016984	cnot4a	91	90.566	ENSSTOG00000007717	CNOT4	99	90.566	Ictidomys_tridecemlineatus
ENSXMAG00000016984	cnot4a	67	87.925	ENSJJAG00000019991	-	93	87.925	Jaculus_jaculus
ENSXMAG00000016984	cnot4a	91	90.566	ENSJJAG00000016618	Cnot4	99	90.566	Jaculus_jaculus
ENSXMAG00000016984	cnot4a	94	97.810	ENSKMAG00000004581	cnot4a	100	98.168	Kryptolebias_marmoratus
ENSXMAG00000016984	cnot4a	100	97.802	ENSLBEG00000009999	cnot4a	94	97.802	Labrus_bergylta
ENSXMAG00000016984	cnot4a	100	68.834	ENSLACG00000002647	CNOT4	99	69.771	Latimeria_chalumnae
ENSXMAG00000016984	cnot4a	100	91.941	ENSLOCG00000016126	cnot4a	92	91.941	Lepisosteus_oculatus
ENSXMAG00000016984	cnot4a	100	71.390	ENSLAFG00000000709	CNOT4	100	71.020	Loxodonta_africana
ENSXMAG00000016984	cnot4a	91	90.566	ENSMFAG00000046349	CNOT4	99	90.566	Macaca_fascicularis
ENSXMAG00000016984	cnot4a	100	71.117	ENSMMUG00000016181	CNOT4	97	82.742	Macaca_mulatta
ENSXMAG00000016984	cnot4a	84	90.566	ENSMNEG00000042164	CNOT4	99	90.566	Macaca_nemestrina
ENSXMAG00000016984	cnot4a	100	71.117	ENSMLEG00000032709	CNOT4	93	90.566	Mandrillus_leucophaeus
ENSXMAG00000016984	cnot4a	100	97.445	ENSMAMG00000023194	cnot4a	100	91.397	Mastacembelus_armatus
ENSXMAG00000016984	cnot4a	100	97.802	ENSMZEG00005007312	cnot4a	100	92.593	Maylandia_zebra
ENSXMAG00000016984	cnot4a	100	68.382	ENSMGAG00000011788	CNOT4	100	67.892	Meleagris_gallopavo
ENSXMAG00000016984	cnot4a	91	90.566	ENSMAUG00000020415	Cnot4	99	90.566	Mesocricetus_auratus
ENSXMAG00000016984	cnot4a	100	71.253	ENSMICG00000001667	CNOT4	100	82.751	Microcebus_murinus
ENSXMAG00000016984	cnot4a	91	90.566	ENSMOCG00000020955	Cnot4	99	90.566	Microtus_ochrogaster
ENSXMAG00000016984	cnot4a	81	97.407	ENSMMOG00000014565	cnot4a	94	97.407	Mola_mola
ENSXMAG00000016984	cnot4a	100	71.683	ENSMODG00000014068	CNOT4	100	70.999	Monodelphis_domestica
ENSXMAG00000016984	cnot4a	93	97.080	ENSMALG00000011662	cnot4a	84	97.080	Monopterus_albus
ENSXMAG00000016984	cnot4a	91	90.566	MGP_CAROLIEiJ_G0028217	Cnot4	99	90.566	Mus_caroli
ENSXMAG00000016984	cnot4a	91	90.566	ENSMUSG00000038784	Cnot4	99	90.566	Mus_musculus
ENSXMAG00000016984	cnot4a	91	90.566	MGP_PahariEiJ_G0021974	Cnot4	99	90.566	Mus_pahari
ENSXMAG00000016984	cnot4a	91	90.566	MGP_SPRETEiJ_G0029216	Cnot4	99	90.566	Mus_spretus
ENSXMAG00000016984	cnot4a	91	90.566	ENSMPUG00000004089	CNOT4	99	90.566	Mustela_putorius_furo
ENSXMAG00000016984	cnot4a	92	72.474	ENSMLUG00000008260	CNOT4	100	72.474	Myotis_lucifugus
ENSXMAG00000016984	cnot4a	100	71.409	ENSNGAG00000015030	Cnot4	100	72.125	Nannospalax_galili
ENSXMAG00000016984	cnot4a	85	92.593	ENSNBRG00000021144	cnot4a	100	92.593	Neolamprologus_brichardi
ENSXMAG00000016984	cnot4a	100	70.981	ENSNLEG00000013352	CNOT4	97	82.742	Nomascus_leucogenys
ENSXMAG00000016984	cnot4a	84	67.965	ENSOPRG00000001023	CNOT4	81	67.965	Ochotona_princeps
ENSXMAG00000016984	cnot4a	91	90.566	ENSODEG00000012975	CNOT4	99	90.566	Octodon_degus
ENSXMAG00000016984	cnot4a	100	97.802	ENSONIG00000008656	cnot4a	100	91.771	Oreochromis_niloticus
ENSXMAG00000016984	cnot4a	91	90.566	ENSOANG00000005006	CNOT4	99	90.566	Ornithorhynchus_anatinus
ENSXMAG00000016984	cnot4a	91	90.566	ENSOCUG00000013448	CNOT4	99	90.566	Oryctolagus_cuniculus
ENSXMAG00000016984	cnot4a	100	97.802	ENSORLG00000003727	cnot4a	100	97.802	Oryzias_latipes
ENSXMAG00000016984	cnot4a	100	97.802	ENSORLG00020015684	cnot4a	100	97.802	Oryzias_latipes_hni
ENSXMAG00000016984	cnot4a	100	97.802	ENSORLG00015008470	cnot4a	100	97.802	Oryzias_latipes_hsok
ENSXMAG00000016984	cnot4a	100	98.535	ENSOMEG00000011084	cnot4a	100	98.535	Oryzias_melastigma
ENSXMAG00000016984	cnot4a	100	71.117	ENSOGAG00000015499	CNOT4	100	70.981	Otolemur_garnettii
ENSXMAG00000016984	cnot4a	100	70.845	ENSOARG00000008803	CNOT4	100	70.708	Ovis_aries
ENSXMAG00000016984	cnot4a	100	71.117	ENSPPAG00000041937	CNOT4	97	82.979	Pan_paniscus
ENSXMAG00000016984	cnot4a	100	71.117	ENSPPRG00000023940	CNOT4	100	72.474	Panthera_pardus
ENSXMAG00000016984	cnot4a	91	90.566	ENSPTIG00000016601	CNOT4	99	90.566	Panthera_tigris_altaica
ENSXMAG00000016984	cnot4a	100	70.981	ENSPTRG00000019727	CNOT4	97	82.742	Pan_troglodytes
ENSXMAG00000016984	cnot4a	100	71.253	ENSPANG00000017724	CNOT4	97	82.742	Papio_anubis
ENSXMAG00000016984	cnot4a	100	87.018	ENSPKIG00000018137	cnot4a	100	90.370	Paramormyrops_kingsleyae
ENSXMAG00000016984	cnot4a	100	68.788	ENSPSIG00000011256	CNOT4	100	68.299	Pelodiscus_sinensis
ENSXMAG00000016984	cnot4a	85	95.926	ENSPMGG00000005671	cnot4a	100	95.926	Periophthalmus_magnuspinnatus
ENSXMAG00000016984	cnot4a	100	71.135	ENSPEMG00000021566	Cnot4	100	72.125	Peromyscus_maniculatus_bairdii
ENSXMAG00000016984	cnot4a	91	90.566	ENSPCIG00000029622	CNOT4	95	90.566	Phascolarctos_cinereus
ENSXMAG00000016984	cnot4a	100	98.535	ENSPFOG00000002228	cnot4a	100	98.005	Poecilia_formosa
ENSXMAG00000016984	cnot4a	100	98.535	ENSPLAG00000001780	cnot4a	100	98.535	Poecilia_latipinna
ENSXMAG00000016984	cnot4a	100	98.175	ENSPMEG00000006852	cnot4a	100	98.535	Poecilia_mexicana
ENSXMAG00000016984	cnot4a	100	98.625	ENSPREG00000008171	cnot4a	100	98.625	Poecilia_reticulata
ENSXMAG00000016984	cnot4a	91	90.566	ENSPPYG00000018026	CNOT4	99	90.566	Pongo_abelii
ENSXMAG00000016984	cnot4a	100	70.845	ENSPCOG00000019907	CNOT4	93	90.566	Propithecus_coquereli
ENSXMAG00000016984	cnot4a	93	71.408	ENSPVAG00000004905	CNOT4	90	69.761	Pteropus_vampyrus
ENSXMAG00000016984	cnot4a	100	97.802	ENSPNYG00000004276	cnot4a	100	92.593	Pundamilia_nyererei
ENSXMAG00000016984	cnot4a	100	91.941	ENSPNAG00000008679	cnot4b	100	92.222	Pygocentrus_nattereri
ENSXMAG00000016984	cnot4a	100	87.086	ENSPNAG00000020433	cnot4a	100	94.444	Pygocentrus_nattereri
ENSXMAG00000016984	cnot4a	91	90.566	ENSRNOG00000010795	Cnot4	99	90.566	Rattus_norvegicus
ENSXMAG00000016984	cnot4a	100	71.117	ENSRBIG00000043977	CNOT4	97	82.742	Rhinopithecus_bieti
ENSXMAG00000016984	cnot4a	91	90.566	ENSSBOG00000020808	CNOT4	99	90.566	Saimiri_boliviensis_boliviensis
ENSXMAG00000016984	cnot4a	100	71.956	ENSSHAG00000013639	CNOT4	100	71.409	Sarcophilus_harrisii
ENSXMAG00000016984	cnot4a	100	91.039	ENSSFOG00015017285	CNOT4	100	92.308	Scleropages_formosus
ENSXMAG00000016984	cnot4a	88	91.538	ENSSFOG00015002019	cnot4a	100	90.741	Scleropages_formosus
ENSXMAG00000016984	cnot4a	100	97.445	ENSSMAG00000008614	cnot4a	100	94.406	Scophthalmus_maximus
ENSXMAG00000016984	cnot4a	82	93.284	ENSSDUG00000018585	cnot4b	99	93.284	Seriola_dumerili
ENSXMAG00000016984	cnot4a	100	97.445	ENSSDUG00000022635	cnot4a	100	98.519	Seriola_dumerili
ENSXMAG00000016984	cnot4a	100	97.445	ENSSLDG00000015770	cnot4a	100	92.010	Seriola_lalandi_dorsalis
ENSXMAG00000016984	cnot4a	100	61.353	ENSSLDG00000014347	cnot4b	100	62.165	Seriola_lalandi_dorsalis
ENSXMAG00000016984	cnot4a	89	88.321	ENSSPUG00000004677	CNOT4	100	88.321	Sphenodon_punctatus
ENSXMAG00000016984	cnot4a	100	97.445	ENSSPAG00000012329	cnot4a	100	98.519	Stegastes_partitus
ENSXMAG00000016984	cnot4a	100	70.981	ENSSSCG00000021354	CNOT4	96	90.566	Sus_scrofa
ENSXMAG00000016984	cnot4a	100	68.750	ENSTGUG00000009161	CNOT4	100	68.260	Taeniopygia_guttata
ENSXMAG00000016984	cnot4a	100	96.703	ENSTRUG00000016861	cnot4a	100	97.407	Takifugu_rubripes
ENSXMAG00000016984	cnot4a	100	84.815	ENSTNIG00000016000	cnot4a	99	90.775	Tetraodon_nigroviridis
ENSXMAG00000016984	cnot4a	93	67.936	ENSTBEG00000002202	CNOT4	88	65.912	Tupaia_belangeri
ENSXMAG00000016984	cnot4a	93	72.368	ENSTTRG00000005122	CNOT4	90	71.067	Tursiops_truncatus
ENSXMAG00000016984	cnot4a	92	72.474	ENSUAMG00000026759	CNOT4	100	72.474	Ursus_americanus
ENSXMAG00000016984	cnot4a	99	71.096	ENSUMAG00000015351	CNOT4	94	74.725	Ursus_maritimus
ENSXMAG00000016984	cnot4a	84	90.566	ENSVVUG00000006200	CNOT4	99	90.566	Vulpes_vulpes
ENSXMAG00000016984	cnot4a	99	89.259	ENSXETG00000010594	cnot4	89	89.259	Xenopus_tropicalis
ENSXMAG00000016984	cnot4a	85	92.969	ENSXCOG00000020824	cnot4a	98	92.969	Xiphophorus_couchianus