EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017126 (Gene tree)
Gene ID: 102237982
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: probable ATP-dependent RNA helicase DDX43
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10478 bases
Position: chr22:22568513-22578990
Accession: 102237982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017169	KH_1	PF00013.29	8.3e-14	1	1
ENSXMAP00000024805	KH_1	PF00013.29	8.3e-14	1	1
ENSXMAP00000017169	DEAD	PF00270.29	1.8e-41	1	1
ENSXMAP00000024805	DEAD	PF00270.29	1.8e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017193	-	3711	-	ENSXMAP00000017169	703 (aa)	-	M4ARS4
ENSXMAT00000040911	-	2579	XM_023326972	ENSXMAP00000024805	703 (aa)	XP_023182740	UPI000293CD32

Gene Model

Click here to download ENSXMAG00000017126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017126	ddx43	97	69.041	ENSAPOG00000001712	ddx43	94	68.996	Acanthochromis_polyacanthus
ENSXMAG00000017126	ddx43	87	73.161	ENSACIG00000012170	ddx43	98	72.053	Amphilophus_citrinellus
ENSXMAG00000017126	ddx43	96	72.807	ENSAOCG00000001331	ddx43	93	72.661	Amphiprion_ocellaris
ENSXMAG00000017126	ddx43	96	72.353	ENSAPEG00000001133	ddx43	92	72.353	Amphiprion_percula
ENSXMAG00000017126	ddx43	96	72.124	ENSATEG00000012664	ddx43	96	72.124	Anabas_testudineus
ENSXMAG00000017126	ddx43	81	63.908	ENSAPLG00000010182	-	97	71.888	Anas_platyrhynchos
ENSXMAG00000017126	ddx43	83	63.898	ENSACAG00000004387	-	97	58.815	Anolis_carolinensis
ENSXMAG00000017126	ddx43	96	71.386	ENSACLG00000026081	ddx43	100	70.270	Astatotilapia_calliptera
ENSXMAG00000017126	ddx43	96	66.955	ENSAMXG00000004457	ddx43	93	67.096	Astyanax_mexicanus
ENSXMAG00000017126	ddx43	69	45.859	WBGene00013214	Y54G11A.3	90	48.140	Caenorhabditis_elegans
ENSXMAG00000017126	ddx43	59	57.512	ENSCSEG00000000532	ddx43	98	56.148	Cynoglossus_semilaevis
ENSXMAG00000017126	ddx43	88	68.810	ENSCVAG00000009980	ddx43	93	68.810	Cyprinodon_variegatus
ENSXMAG00000017126	ddx43	97	66.187	ENSDARG00000022614	ddx43	93	66.427	Danio_rerio
ENSXMAG00000017126	ddx43	87	48.553	FBgn0037549	CG7878	87	48.553	Drosophila_melanogaster
ENSXMAG00000017126	ddx43	64	48.451	ENSETEG00000014626	-	88	47.629	Echinops_telfairi
ENSXMAG00000017126	ddx43	96	66.960	ENSELUG00000012126	ddx43	100	66.478	Esox_lucius
ENSXMAG00000017126	ddx43	85	63.062	ENSFALG00000007042	-	98	58.850	Ficedula_albicollis
ENSXMAG00000017126	ddx43	75	85.389	ENSFHEG00000011226	ddx43	100	84.268	Fundulus_heteroclitus
ENSXMAG00000017126	ddx43	64	76.991	ENSGMOG00000004178	ddx43	98	76.991	Gadus_morhua
ENSXMAG00000017126	ddx43	61	73.068	ENSGALG00000015928	-	97	73.068	Gallus_gallus
ENSXMAG00000017126	ddx43	100	91.619	ENSGAFG00000012622	ddx43	100	91.619	Gambusia_affinis
ENSXMAG00000017126	ddx43	82	77.470	ENSGACG00000012072	ddx43	97	76.804	Gasterosteus_aculeatus
ENSXMAG00000017126	ddx43	88	58.720	ENSGAGG00000025230	-	84	59.247	Gopherus_agassizii
ENSXMAG00000017126	ddx43	96	69.899	ENSHBUG00000011653	ddx43	100	70.270	Haplochromis_burtoni
ENSXMAG00000017126	ddx43	96	63.889	ENSHCOG00000014704	ddx43	100	63.534	Hippocampus_comes
ENSXMAG00000017126	ddx43	100	66.477	ENSIPUG00000023423	ddx43	96	67.651	Ictalurus_punctatus
ENSXMAG00000017126	ddx43	96	75.588	ENSKMAG00000016167	ddx43	100	74.366	Kryptolebias_marmoratus
ENSXMAG00000017126	ddx43	96	71.408	ENSLBEG00000007913	ddx43	100	71.348	Labrus_bergylta
ENSXMAG00000017126	ddx43	71	67.339	ENSLACG00000000741	ddx43	100	67.339	Latimeria_chalumnae
ENSXMAG00000017126	ddx43	83	70.137	ENSLOCG00000016170	ddx43	85	70.137	Lepisosteus_oculatus
ENSXMAG00000017126	ddx43	96	68.142	ENSMAMG00000022128	ddx43	100	66.432	Mastacembelus_armatus
ENSXMAG00000017126	ddx43	96	71.386	ENSMZEG00005027349	ddx43	100	70.270	Maylandia_zebra
ENSXMAG00000017126	ddx43	83	62.906	ENSMGAG00000013832	-	98	62.906	Meleagris_gallopavo
ENSXMAG00000017126	ddx43	100	67.598	ENSMMOG00000007346	ddx43	100	68.310	Mola_mola
ENSXMAG00000017126	ddx43	82	54.059	ENSMODG00000014335	-	95	54.059	Monodelphis_domestica
ENSXMAG00000017126	ddx43	82	59.931	ENSMODG00000018546	-	86	59.931	Monodelphis_domestica
ENSXMAG00000017126	ddx43	97	70.725	ENSMALG00000020673	ddx43	100	69.638	Monopterus_albus
ENSXMAG00000017126	ddx43	96	71.534	ENSNBRG00000010942	ddx43	100	70.270	Neolamprologus_brichardi
ENSXMAG00000017126	ddx43	96	71.681	ENSONIG00000001195	ddx43	100	70.555	Oreochromis_niloticus
ENSXMAG00000017126	ddx43	55	63.660	ENSOANG00000006467	-	99	62.312	Ornithorhynchus_anatinus
ENSXMAG00000017126	ddx43	87	76.144	ENSORLG00000002267	ddx43	93	76.183	Oryzias_latipes
ENSXMAG00000017126	ddx43	87	75.980	ENSORLG00020018592	ddx43	98	74.571	Oryzias_latipes_hni
ENSXMAG00000017126	ddx43	87	75.856	ENSORLG00015004854	ddx43	92	75.856	Oryzias_latipes_hsok
ENSXMAG00000017126	ddx43	87	75.122	ENSOMEG00000023418	ddx43	94	75.122	Oryzias_melastigma
ENSXMAG00000017126	ddx43	96	62.321	ENSPKIG00000002941	ddx43	95	62.321	Paramormyrops_kingsleyae
ENSXMAG00000017126	ddx43	84	63.328	ENSPSIG00000002202	-	90	63.328	Pelodiscus_sinensis
ENSXMAG00000017126	ddx43	56	59.137	ENSPMGG00000019854	ddx43	91	59.701	Periophthalmus_magnuspinnatus
ENSXMAG00000017126	ddx43	84	51.256	ENSPCIG00000002492	-	91	51.712	Phascolarctos_cinereus
ENSXMAG00000017126	ddx43	61	69.953	ENSPCIG00000017981	-	96	69.953	Phascolarctos_cinereus
ENSXMAG00000017126	ddx43	100	91.335	ENSPFOG00000004241	ddx43	100	91.335	Poecilia_formosa
ENSXMAG00000017126	ddx43	100	91.761	ENSPLAG00000023362	ddx43	100	91.761	Poecilia_latipinna
ENSXMAG00000017126	ddx43	100	91.193	ENSPMEG00000004870	ddx43	100	91.193	Poecilia_mexicana
ENSXMAG00000017126	ddx43	100	82.578	ENSPREG00000000923	ddx43	100	82.578	Poecilia_reticulata
ENSXMAG00000017126	ddx43	96	65.452	ENSPNYG00000009064	ddx43	100	64.557	Pundamilia_nyererei
ENSXMAG00000017126	ddx43	96	67.004	ENSPNAG00000001232	ddx43	93	67.004	Pygocentrus_nattereri
ENSXMAG00000017126	ddx43	83	55.862	ENSSHAG00000016933	-	97	55.862	Sarcophilus_harrisii
ENSXMAG00000017126	ddx43	84	59.191	ENSSHAG00000001847	-	92	58.553	Sarcophilus_harrisii
ENSXMAG00000017126	ddx43	85	65.662	ENSSFOG00015012193	ddx43	89	66.325	Scleropages_formosus
ENSXMAG00000017126	ddx43	96	71.184	ENSSMAG00000019288	ddx43	95	71.184	Scophthalmus_maximus
ENSXMAG00000017126	ddx43	96	73.538	ENSSDUG00000020120	ddx43	95	73.256	Seriola_dumerili
ENSXMAG00000017126	ddx43	97	70.803	ENSSLDG00000017225	ddx43	93	70.760	Seriola_lalandi_dorsalis
ENSXMAG00000017126	ddx43	67	61.311	ENSSPUG00000018097	-	96	61.311	Sphenodon_punctatus
ENSXMAG00000017126	ddx43	96	72.861	ENSSPAG00000006858	ddx43	100	71.248	Stegastes_partitus
ENSXMAG00000017126	ddx43	84	63.238	ENSTGUG00000012684	-	97	63.238	Taeniopygia_guttata
ENSXMAG00000017126	ddx43	95	62.297	ENSTRUG00000012795	ddx43	96	62.297	Takifugu_rubripes
ENSXMAG00000017126	ddx43	82	72.491	ENSTNIG00000009822	ddx43	97	72.491	Tetraodon_nigroviridis
ENSXMAG00000017126	ddx43	96	58.971	ENSXETG00000011767	ddx43	97	58.971	Xenopus_tropicalis
ENSXMAG00000017126	ddx43	100	89.631	ENSXCOG00000013810	ddx43	100	89.631	Xiphophorus_couchianus