EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017165 (Gene tree)
Gene ID: 102230204
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6934 bases
Position: chr13:26565962-26572895
Accession: 102230204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017220	SF3a60_bindingd	PF12108.8	1.5e-14	1	1
ENSXMAP00000031516	SF3a60_bindingd	PF12108.8	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031022	-	1509	-	ENSXMAP00000031516	502 (aa)	-	-
ENSXMAT00000017244	-	1845	XM_005804491	ENSXMAP00000017220	501 (aa)	XP_005804548	M4ARX5

Gene Model

Click here to download ENSXMAG00000017165's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017165	sf3a3	100	90.220	ENSG00000183431	SF3A3	100	90.220	Homo_sapiens
ENSXMAG00000017165	sf3a3	100	97.006	ENSAPOG00000015608	sf3a3	100	97.006	Acanthochromis_polyacanthus
ENSXMAG00000017165	sf3a3	100	90.220	ENSAMEG00000001262	SF3A3	100	90.220	Ailuropoda_melanoleuca
ENSXMAG00000017165	sf3a3	95	91.321	ENSACIG00000009061	sf3a3	99	91.321	Amphilophus_citrinellus
ENSXMAG00000017165	sf3a3	100	97.206	ENSAOCG00000013954	sf3a3	100	97.206	Amphiprion_ocellaris
ENSXMAG00000017165	sf3a3	100	97.206	ENSAPEG00000007297	sf3a3	100	97.206	Amphiprion_percula
ENSXMAG00000017165	sf3a3	100	97.006	ENSATEG00000008754	sf3a3	100	97.006	Anabas_testudineus
ENSXMAG00000017165	sf3a3	94	90.618	ENSAPLG00000014900	SF3A3	100	90.618	Anas_platyrhynchos
ENSXMAG00000017165	sf3a3	100	89.222	ENSACAG00000017058	SF3A3	100	89.222	Anolis_carolinensis
ENSXMAG00000017165	sf3a3	99	86.948	ENSANAG00000014878	SF3A3	100	86.948	Aotus_nancymaae
ENSXMAG00000017165	sf3a3	100	70.060	ENSANAG00000036903	-	100	70.060	Aotus_nancymaae
ENSXMAG00000017165	sf3a3	100	97.405	ENSACLG00000017977	sf3a3	100	97.405	Astatotilapia_calliptera
ENSXMAG00000017165	sf3a3	100	93.613	ENSAMXG00000016855	sf3a3	87	93.613	Astyanax_mexicanus
ENSXMAG00000017165	sf3a3	100	90.220	ENSBTAG00000007299	SF3A3	100	90.220	Bos_taurus
ENSXMAG00000017165	sf3a3	100	52.087	WBGene00011758	T13H5.4	100	52.087	Caenorhabditis_elegans
ENSXMAG00000017165	sf3a3	100	90.220	ENSCJAG00000002176	SF3A3	100	90.220	Callithrix_jacchus
ENSXMAG00000017165	sf3a3	100	90.220	ENSCAFG00000003222	-	100	90.220	Canis_familiaris
ENSXMAG00000017165	sf3a3	100	90.220	ENSCAFG00000000683	-	100	90.220	Canis_familiaris
ENSXMAG00000017165	sf3a3	100	90.220	ENSCAFG00020006186	SF3A3	100	90.220	Canis_lupus_dingo
ENSXMAG00000017165	sf3a3	100	90.220	ENSCHIG00000020638	SF3A3	100	90.220	Capra_hircus
ENSXMAG00000017165	sf3a3	100	84.032	ENSTSYG00000008417	SF3A3	100	84.032	Carlito_syrichta
ENSXMAG00000017165	sf3a3	85	59.039	ENSCAPG00000003466	SF3A3	100	56.293	Cavia_aperea
ENSXMAG00000017165	sf3a3	100	90.419	ENSCPOG00000008660	SF3A3	100	90.419	Cavia_porcellus
ENSXMAG00000017165	sf3a3	100	90.220	ENSCCAG00000033732	SF3A3	100	90.220	Cebus_capucinus
ENSXMAG00000017165	sf3a3	100	64.471	ENSCCAG00000034048	-	100	61.477	Cebus_capucinus
ENSXMAG00000017165	sf3a3	94	73.134	ENSCATG00000041660	-	100	74.627	Cercocebus_atys
ENSXMAG00000017165	sf3a3	100	90.220	ENSCATG00000043496	SF3A3	100	90.220	Cercocebus_atys
ENSXMAG00000017165	sf3a3	100	67.131	ENSCATG00000043537	-	100	67.729	Cercocebus_atys
ENSXMAG00000017165	sf3a3	100	90.220	ENSCLAG00000010838	SF3A3	100	90.220	Chinchilla_lanigera
ENSXMAG00000017165	sf3a3	95	89.916	ENSCSAG00000001120	SF3A3	100	89.916	Chlorocebus_sabaeus
ENSXMAG00000017165	sf3a3	80	85.185	ENSCHOG00000006849	SF3A3	71	94.483	Choloepus_hoffmanni
ENSXMAG00000017165	sf3a3	100	83.034	ENSCPBG00000018291	-	100	83.034	Chrysemys_picta_bellii
ENSXMAG00000017165	sf3a3	60	71.000	ENSCPBG00000007472	-	79	71.000	Chrysemys_picta_bellii
ENSXMAG00000017165	sf3a3	100	67.729	ENSCING00000002730	-	100	67.729	Ciona_intestinalis
ENSXMAG00000017165	sf3a3	100	66.267	ENSCSAVG00000005063	-	100	66.267	Ciona_savignyi
ENSXMAG00000017165	sf3a3	100	90.220	ENSCANG00000042083	SF3A3	100	90.220	Colobus_angolensis_palliatus
ENSXMAG00000017165	sf3a3	100	64.671	ENSCANG00000035535	-	100	64.671	Colobus_angolensis_palliatus
ENSXMAG00000017165	sf3a3	100	90.419	ENSCGRG00001011320	Sf3a3	100	90.419	Cricetulus_griseus_chok1gshd
ENSXMAG00000017165	sf3a3	100	90.419	ENSCGRG00000012156	Sf3a3	100	90.419	Cricetulus_griseus_crigri
ENSXMAG00000017165	sf3a3	100	94.611	ENSCSEG00000010401	sf3a3	100	94.611	Cynoglossus_semilaevis
ENSXMAG00000017165	sf3a3	94	97.655	ENSCVAG00000010239	sf3a3	95	97.655	Cyprinodon_variegatus
ENSXMAG00000017165	sf3a3	100	92.415	ENSDARG00000100114	sf3a3	100	93.317	Danio_rerio
ENSXMAG00000017165	sf3a3	91	89.934	ENSDNOG00000046628	SF3A3	99	89.934	Dasypus_novemcinctus
ENSXMAG00000017165	sf3a3	100	90.419	ENSDORG00000008798	Sf3a3	100	90.419	Dipodomys_ordii
ENSXMAG00000017165	sf3a3	100	64.427	FBgn0014366	noi	100	64.229	Drosophila_melanogaster
ENSXMAG00000017165	sf3a3	100	78.330	ENSEBUG00000015411	sf3a3	92	78.728	Eptatretus_burgeri
ENSXMAG00000017165	sf3a3	100	90.220	ENSEASG00005012906	SF3A3	100	90.220	Equus_asinus_asinus
ENSXMAG00000017165	sf3a3	100	90.220	ENSECAG00000017333	SF3A3	100	90.220	Equus_caballus
ENSXMAG00000017165	sf3a3	100	92.415	ENSELUG00000010024	sf3a3	100	92.415	Esox_lucius
ENSXMAG00000017165	sf3a3	100	90.220	ENSFCAG00000027772	SF3A3	100	90.220	Felis_catus
ENSXMAG00000017165	sf3a3	100	90.419	ENSFALG00000001003	SF3A3	100	90.419	Ficedula_albicollis
ENSXMAG00000017165	sf3a3	100	90.419	ENSFDAG00000020908	SF3A3	100	90.419	Fukomys_damarensis
ENSXMAG00000017165	sf3a3	100	97.605	ENSFHEG00000019107	sf3a3	100	97.605	Fundulus_heteroclitus
ENSXMAG00000017165	sf3a3	100	92.016	ENSGMOG00000015540	sf3a3	100	92.016	Gadus_morhua
ENSXMAG00000017165	sf3a3	100	90.220	ENSGALG00000001540	SF3A3	100	90.220	Gallus_gallus
ENSXMAG00000017165	sf3a3	100	99.800	ENSGAFG00000002320	sf3a3	100	99.800	Gambusia_affinis
ENSXMAG00000017165	sf3a3	100	96.008	ENSGACG00000007842	sf3a3	100	96.008	Gasterosteus_aculeatus
ENSXMAG00000017165	sf3a3	100	90.220	ENSGAGG00000014980	SF3A3	100	90.220	Gopherus_agassizii
ENSXMAG00000017165	sf3a3	100	69.661	ENSGGOG00000022611	-	100	69.261	Gorilla_gorilla
ENSXMAG00000017165	sf3a3	100	90.220	ENSGGOG00000013928	SF3A3	100	90.220	Gorilla_gorilla
ENSXMAG00000017165	sf3a3	100	97.405	ENSHBUG00000018158	sf3a3	100	97.588	Haplochromis_burtoni
ENSXMAG00000017165	sf3a3	100	90.419	ENSHGLG00000012502	SF3A3	100	90.419	Heterocephalus_glaber_female
ENSXMAG00000017165	sf3a3	100	90.419	ENSHGLG00100010546	SF3A3	100	90.419	Heterocephalus_glaber_male
ENSXMAG00000017165	sf3a3	100	94.012	ENSHCOG00000015109	sf3a3	100	94.012	Hippocampus_comes
ENSXMAG00000017165	sf3a3	100	92.016	ENSIPUG00000011603	sf3a3	100	92.016	Ictalurus_punctatus
ENSXMAG00000017165	sf3a3	100	90.220	ENSSTOG00000001691	SF3A3	100	90.220	Ictidomys_tridecemlineatus
ENSXMAG00000017165	sf3a3	100	90.619	ENSJJAG00000012404	Sf3a3	100	90.619	Jaculus_jaculus
ENSXMAG00000017165	sf3a3	100	97.605	ENSKMAG00000007632	sf3a3	100	97.605	Kryptolebias_marmoratus
ENSXMAG00000017165	sf3a3	100	87.052	ENSLBEG00000000816	sf3a3	100	87.052	Labrus_bergylta
ENSXMAG00000017165	sf3a3	100	93.014	ENSLOCG00000003273	sf3a3	100	93.014	Lepisosteus_oculatus
ENSXMAG00000017165	sf3a3	100	78.842	ENSLAFG00000008094	SF3A3	100	78.842	Loxodonta_africana
ENSXMAG00000017165	sf3a3	94	72.708	ENSMFAG00000036706	-	100	74.414	Macaca_fascicularis
ENSXMAG00000017165	sf3a3	100	90.220	ENSMFAG00000043047	SF3A3	100	90.220	Macaca_fascicularis
ENSXMAG00000017165	sf3a3	100	90.220	ENSMMUG00000023199	SF3A3	100	90.220	Macaca_mulatta
ENSXMAG00000017165	sf3a3	100	71.116	ENSMMUG00000038820	-	100	72.709	Macaca_mulatta
ENSXMAG00000017165	sf3a3	94	70.149	ENSMNEG00000028686	-	100	71.855	Macaca_nemestrina
ENSXMAG00000017165	sf3a3	100	90.220	ENSMNEG00000044291	SF3A3	100	90.220	Macaca_nemestrina
ENSXMAG00000017165	sf3a3	100	90.220	ENSMLEG00000030641	SF3A3	100	90.220	Mandrillus_leucophaeus
ENSXMAG00000017165	sf3a3	100	74.451	ENSMLEG00000036714	-	100	75.848	Mandrillus_leucophaeus
ENSXMAG00000017165	sf3a3	100	66.335	ENSMLEG00000028631	-	100	66.932	Mandrillus_leucophaeus
ENSXMAG00000017165	sf3a3	100	96.607	ENSMAMG00000001942	sf3a3	100	96.607	Mastacembelus_armatus
ENSXMAG00000017165	sf3a3	100	97.405	ENSMZEG00005016987	sf3a3	100	97.405	Maylandia_zebra
ENSXMAG00000017165	sf3a3	100	85.885	ENSMGAG00000002875	SF3A3	100	85.885	Meleagris_gallopavo
ENSXMAG00000017165	sf3a3	100	84.631	ENSMICG00000043548	-	100	84.631	Microcebus_murinus
ENSXMAG00000017165	sf3a3	91	87.336	ENSMICG00000026541	-	100	87.336	Microcebus_murinus
ENSXMAG00000017165	sf3a3	100	86.228	ENSMICG00000001485	-	100	86.228	Microcebus_murinus
ENSXMAG00000017165	sf3a3	95	84.421	ENSMOCG00000014565	-	97	83.158	Microtus_ochrogaster
ENSXMAG00000017165	sf3a3	100	87.226	ENSMOCG00000019939	-	100	87.226	Microtus_ochrogaster
ENSXMAG00000017165	sf3a3	100	96.407	ENSMMOG00000014307	sf3a3	100	96.407	Mola_mola
ENSXMAG00000017165	sf3a3	100	70.485	ENSMODG00000017729	-	100	69.498	Monodelphis_domestica
ENSXMAG00000017165	sf3a3	100	83.234	ENSMODG00000024045	-	100	83.234	Monodelphis_domestica
ENSXMAG00000017165	sf3a3	100	96.607	ENSMALG00000004836	sf3a3	100	96.930	Monopterus_albus
ENSXMAG00000017165	sf3a3	100	90.419	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.419	Mus_caroli
ENSXMAG00000017165	sf3a3	100	90.419	ENSMUSG00000028902	Sf3a3	100	90.419	Mus_musculus
ENSXMAG00000017165	sf3a3	100	85.429	MGP_PahariEiJ_G0028780	Sf3a3	100	85.429	Mus_pahari
ENSXMAG00000017165	sf3a3	100	90.419	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.419	Mus_spretus
ENSXMAG00000017165	sf3a3	100	90.220	ENSMLUG00000000991	SF3A3	100	90.220	Myotis_lucifugus
ENSXMAG00000017165	sf3a3	100	85.230	ENSNGAG00000018032	Sf3a3	100	85.230	Nannospalax_galili
ENSXMAG00000017165	sf3a3	100	82.236	ENSNLEG00000011720	SF3A3	100	82.236	Nomascus_leucogenys
ENSXMAG00000017165	sf3a3	100	90.419	ENSOPRG00000012785	SF3A3	100	90.419	Ochotona_princeps
ENSXMAG00000017165	sf3a3	100	85.030	ENSODEG00000006854	-	100	87.625	Octodon_degus
ENSXMAG00000017165	sf3a3	100	86.228	ENSODEG00000007470	-	100	86.228	Octodon_degus
ENSXMAG00000017165	sf3a3	100	78.842	ENSODEG00000018393	-	100	78.643	Octodon_degus
ENSXMAG00000017165	sf3a3	100	76.295	ENSODEG00000000937	-	100	78.685	Octodon_degus
ENSXMAG00000017165	sf3a3	87	97.931	ENSONIG00000010296	sf3a3	100	97.931	Oreochromis_niloticus
ENSXMAG00000017165	sf3a3	94	89.765	ENSOANG00000002473	SF3A3	100	89.765	Ornithorhynchus_anatinus
ENSXMAG00000017165	sf3a3	100	90.419	ENSOCUG00000005407	SF3A3	100	90.419	Oryctolagus_cuniculus
ENSXMAG00000017165	sf3a3	100	96.008	ENSORLG00000008175	sf3a3	100	96.008	Oryzias_latipes
ENSXMAG00000017165	sf3a3	100	95.808	ENSORLG00020013708	sf3a3	100	95.808	Oryzias_latipes_hni
ENSXMAG00000017165	sf3a3	100	95.609	ENSORLG00015004104	sf3a3	100	95.609	Oryzias_latipes_hsok
ENSXMAG00000017165	sf3a3	100	97.006	ENSOMEG00000020177	sf3a3	100	97.006	Oryzias_melastigma
ENSXMAG00000017165	sf3a3	100	90.220	ENSOARG00000019950	SF3A3	100	90.220	Ovis_aries
ENSXMAG00000017165	sf3a3	100	90.220	ENSPPAG00000034066	SF3A3	100	90.220	Pan_paniscus
ENSXMAG00000017165	sf3a3	100	68.862	ENSPPAG00000039955	-	100	68.463	Pan_paniscus
ENSXMAG00000017165	sf3a3	100	90.220	ENSPPRG00000001258	SF3A3	100	90.220	Panthera_pardus
ENSXMAG00000017165	sf3a3	100	90.220	ENSPTIG00000007515	SF3A3	100	90.220	Panthera_tigris_altaica
ENSXMAG00000017165	sf3a3	100	90.220	ENSPTRG00000000559	SF3A3	100	90.220	Pan_troglodytes
ENSXMAG00000017165	sf3a3	100	70.060	ENSPTRG00000046013	-	100	69.661	Pan_troglodytes
ENSXMAG00000017165	sf3a3	100	77.246	ENSPANG00000029393	-	100	78.643	Papio_anubis
ENSXMAG00000017165	sf3a3	100	90.220	ENSPANG00000021859	SF3A3	100	90.220	Papio_anubis
ENSXMAG00000017165	sf3a3	87	81.818	ENSPANG00000031214	-	100	65.469	Papio_anubis
ENSXMAG00000017165	sf3a3	100	92.615	ENSPKIG00000004719	sf3a3	100	92.615	Paramormyrops_kingsleyae
ENSXMAG00000017165	sf3a3	100	88.469	ENSPSIG00000004273	SF3A3	100	88.469	Pelodiscus_sinensis
ENSXMAG00000017165	sf3a3	91	94.967	ENSPMGG00000003610	sf3a3	94	94.967	Periophthalmus_magnuspinnatus
ENSXMAG00000017165	sf3a3	100	90.419	ENSPEMG00000020805	Sf3a3	100	90.419	Peromyscus_maniculatus_bairdii
ENSXMAG00000017165	sf3a3	54	77.407	ENSPMAG00000001044	sf3a3	98	77.407	Petromyzon_marinus
ENSXMAG00000017165	sf3a3	100	90.020	ENSPCIG00000025719	SF3A3	100	90.020	Phascolarctos_cinereus
ENSXMAG00000017165	sf3a3	100	99.800	ENSPFOG00000005284	sf3a3	100	99.800	Poecilia_formosa
ENSXMAG00000017165	sf3a3	99	96.378	ENSPLAG00000003979	sf3a3	92	96.378	Poecilia_latipinna
ENSXMAG00000017165	sf3a3	76	99.213	ENSPMEG00000021132	sf3a3	88	99.213	Poecilia_mexicana
ENSXMAG00000017165	sf3a3	100	99.800	ENSPREG00000013802	sf3a3	100	99.800	Poecilia_reticulata
ENSXMAG00000017165	sf3a3	100	87.625	ENSPPYG00000001519	SF3A3	100	87.625	Pongo_abelii
ENSXMAG00000017165	sf3a3	100	84.032	ENSPCAG00000010734	SF3A3	100	84.032	Procavia_capensis
ENSXMAG00000017165	sf3a3	100	74.251	ENSPCOG00000017131	-	100	74.251	Propithecus_coquereli
ENSXMAG00000017165	sf3a3	100	79.365	ENSPCOG00000020389	-	100	79.365	Propithecus_coquereli
ENSXMAG00000017165	sf3a3	100	78.842	ENSPVAG00000010158	SF3A3	100	78.842	Pteropus_vampyrus
ENSXMAG00000017165	sf3a3	100	97.405	ENSPNYG00000000786	sf3a3	100	97.405	Pundamilia_nyererei
ENSXMAG00000017165	sf3a3	100	94.012	ENSPNAG00000010298	sf3a3	100	94.012	Pygocentrus_nattereri
ENSXMAG00000017165	sf3a3	100	90.419	ENSRNOG00000007629	Sf3a3	100	90.419	Rattus_norvegicus
ENSXMAG00000017165	sf3a3	100	90.220	ENSRBIG00000043567	SF3A3	100	90.220	Rhinopithecus_bieti
ENSXMAG00000017165	sf3a3	100	66.866	ENSRBIG00000043833	-	100	66.866	Rhinopithecus_bieti
ENSXMAG00000017165	sf3a3	100	67.465	ENSRBIG00000041123	-	100	67.465	Rhinopithecus_bieti
ENSXMAG00000017165	sf3a3	100	90.220	ENSRROG00000033888	SF3A3	100	90.220	Rhinopithecus_roxellana
ENSXMAG00000017165	sf3a3	94	71.855	ENSRROG00000032346	-	100	71.855	Rhinopithecus_roxellana
ENSXMAG00000017165	sf3a3	89	87.106	ENSSBOG00000032688	SF3A3	100	87.106	Saimiri_boliviensis_boliviensis
ENSXMAG00000017165	sf3a3	100	65.469	ENSSBOG00000026932	-	100	64.471	Saimiri_boliviensis_boliviensis
ENSXMAG00000017165	sf3a3	90	90.728	ENSSHAG00000014530	SF3A3	100	90.728	Sarcophilus_harrisii
ENSXMAG00000017165	sf3a3	100	94.810	ENSSFOG00015005975	sf3a3	100	94.810	Scleropages_formosus
ENSXMAG00000017165	sf3a3	100	95.808	ENSSMAG00000020213	sf3a3	100	95.808	Scophthalmus_maximus
ENSXMAG00000017165	sf3a3	100	93.214	ENSSDUG00000011590	sf3a3	100	93.214	Seriola_dumerili
ENSXMAG00000017165	sf3a3	100	97.206	ENSSLDG00000020635	sf3a3	100	97.206	Seriola_lalandi_dorsalis
ENSXMAG00000017165	sf3a3	100	90.020	ENSSPUG00000004010	SF3A3	100	90.020	Sphenodon_punctatus
ENSXMAG00000017165	sf3a3	100	97.804	ENSSPAG00000018653	sf3a3	100	97.804	Stegastes_partitus
ENSXMAG00000017165	sf3a3	100	90.220	ENSSSCG00000003643	SF3A3	100	90.220	Sus_scrofa
ENSXMAG00000017165	sf3a3	87	91.494	ENSTGUG00000001466	SF3A3	100	91.284	Taeniopygia_guttata
ENSXMAG00000017165	sf3a3	100	95.210	ENSTRUG00000009089	sf3a3	100	95.210	Takifugu_rubripes
ENSXMAG00000017165	sf3a3	100	94.632	ENSTNIG00000009800	sf3a3	100	94.632	Tetraodon_nigroviridis
ENSXMAG00000017165	sf3a3	100	78.443	ENSTBEG00000007614	SF3A3	100	78.443	Tupaia_belangeri
ENSXMAG00000017165	sf3a3	100	90.020	ENSTTRG00000013519	SF3A3	100	90.020	Tursiops_truncatus
ENSXMAG00000017165	sf3a3	100	90.220	ENSUAMG00000006134	SF3A3	100	90.220	Ursus_americanus
ENSXMAG00000017165	sf3a3	100	90.220	ENSUMAG00000021250	SF3A3	100	90.220	Ursus_maritimus
ENSXMAG00000017165	sf3a3	66	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSXMAG00000017165	sf3a3	100	86.427	ENSVVUG00000022908	SF3A3	100	86.427	Vulpes_vulpes
ENSXMAG00000017165	sf3a3	100	88.623	ENSXETG00000022923	sf3a3	100	88.623	Xenopus_tropicalis