EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017361 (Gene tree)
Gene ID: 102222734
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6205 bases
Position: chr13:25094222-25100426
Accession: 102222734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017401	RRM_1	PF00076.22	1.4e-26	1	2
ENSXMAP00000017401	RRM_1	PF00076.22	1.4e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017425	-	1071	XM_005814264	ENSXMAP00000017401	308 (aa)	XP_005814321	M4ASF6

Gene Model

Click here to download ENSXMAG00000017361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017361	trnau1apa	93	57.639	ENSG00000180098	TRNAU1AP	95	55.903	Homo_sapiens
ENSXMAG00000017361	trnau1apa	99	83.713	ENSAPOG00000007148	TRNAU1AP	99	83.007	Acanthochromis_polyacanthus
ENSXMAG00000017361	trnau1apa	93	57.986	ENSAMEG00000011367	TRNAU1AP	95	56.250	Ailuropoda_melanoleuca
ENSXMAG00000017361	trnau1apa	91	92.135	ENSACIG00000004161	trnau1apa	93	92.135	Amphilophus_citrinellus
ENSXMAG00000017361	trnau1apa	99	85.294	ENSAOCG00000008056	trnau1apa	99	83.333	Amphiprion_ocellaris
ENSXMAG00000017361	trnau1apa	99	85.294	ENSAPEG00000008868	trnau1apa	99	83.333	Amphiprion_percula
ENSXMAG00000017361	trnau1apa	99	79.936	ENSATEG00000012140	trnau1apa	99	78.662	Anabas_testudineus
ENSXMAG00000017361	trnau1apa	92	55.208	ENSAPLG00000002606	TRNAU1AP	99	55.903	Anas_platyrhynchos
ENSXMAG00000017361	trnau1apa	92	47.902	ENSACAG00000003995	-	94	46.735	Anolis_carolinensis
ENSXMAG00000017361	trnau1apa	75	37.607	ENSACAG00000004205	-	86	37.247	Anolis_carolinensis
ENSXMAG00000017361	trnau1apa	93	57.639	ENSANAG00000018976	TRNAU1AP	95	55.903	Aotus_nancymaae
ENSXMAG00000017361	trnau1apa	99	84.314	ENSACLG00000018515	trnau1apa	99	83.007	Astatotilapia_calliptera
ENSXMAG00000017361	trnau1apa	93	69.565	ENSAMXG00000029240	-	95	69.565	Astyanax_mexicanus
ENSXMAG00000017361	trnau1apa	99	52.090	ENSAMXG00000013750	trnau1apa	97	52.564	Astyanax_mexicanus
ENSXMAG00000017361	trnau1apa	93	57.292	ENSBTAG00000010393	TRNAU1AP	95	55.556	Bos_taurus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCJAG00000009717	TRNAU1AP	87	65.753	Callithrix_jacchus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCAFG00000011735	TRNAU1AP	95	55.903	Canis_familiaris
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCAFG00020023584	TRNAU1AP	95	55.903	Canis_lupus_dingo
ENSXMAG00000017361	trnau1apa	93	57.292	ENSCHIG00000023215	TRNAU1AP	95	55.556	Capra_hircus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSTSYG00000003506	TRNAU1AP	87	65.753	Carlito_syrichta
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCPOG00000001925	TRNAU1AP	95	55.903	Cavia_porcellus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCCAG00000037506	TRNAU1AP	87	65.753	Cebus_capucinus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCATG00000044617	TRNAU1AP	87	65.753	Cercocebus_atys
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCLAG00000008223	TRNAU1AP	95	55.903	Chinchilla_lanigera
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCSAG00000001014	TRNAU1AP	95	55.903	Chlorocebus_sabaeus
ENSXMAG00000017361	trnau1apa	90	56.318	ENSCPBG00000000121	TRNAU1AP	96	55.714	Chrysemys_picta_bellii
ENSXMAG00000017361	trnau1apa	71	32.780	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSXMAG00000017361	trnau1apa	93	50.000	ENSCANG00000041949	TRNAU1AP	93	50.000	Colobus_angolensis_palliatus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCGRG00001004713	Trnau1ap	95	55.903	Cricetulus_griseus_chok1gshd
ENSXMAG00000017361	trnau1apa	93	57.639	ENSCGRG00000014532	Trnau1ap	95	55.903	Cricetulus_griseus_crigri
ENSXMAG00000017361	trnau1apa	99	70.927	ENSCSEG00000006663	trnau1apa	89	88.148	Cynoglossus_semilaevis
ENSXMAG00000017361	trnau1apa	99	87.948	ENSCVAG00000018069	trnau1apa	99	87.948	Cyprinodon_variegatus
ENSXMAG00000017361	trnau1apa	99	49.355	ENSDARG00000101323	trnau1apa	95	46.429	Danio_rerio
ENSXMAG00000017361	trnau1apa	57	58.192	ENSDNOG00000047959	-	89	58.721	Dasypus_novemcinctus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSDNOG00000033009	TRNAU1AP	95	55.903	Dasypus_novemcinctus
ENSXMAG00000017361	trnau1apa	93	54.895	ENSDORG00000006349	Trnau1ap	97	58.403	Dipodomys_ordii
ENSXMAG00000017361	trnau1apa	93	36.000	FBgn0031607	CG15440	96	34.259	Drosophila_melanogaster
ENSXMAG00000017361	trnau1apa	79	54.286	ENSETEG00000012594	TRNAU1AP	94	53.469	Echinops_telfairi
ENSXMAG00000017361	trnau1apa	61	46.591	ENSEBUG00000006349	-	56	46.591	Eptatretus_burgeri
ENSXMAG00000017361	trnau1apa	93	57.639	ENSEASG00005010062	TRNAU1AP	90	65.753	Equus_asinus_asinus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSECAG00000012980	TRNAU1AP	90	65.753	Equus_caballus
ENSXMAG00000017361	trnau1apa	93	80.682	ENSELUG00000022790	-	96	80.682	Esox_lucius
ENSXMAG00000017361	trnau1apa	99	67.961	ENSELUG00000017686	trnau1apa	99	67.419	Esox_lucius
ENSXMAG00000017361	trnau1apa	93	57.639	ENSFCAG00000013401	TRNAU1AP	95	55.903	Felis_catus
ENSXMAG00000017361	trnau1apa	90	55.957	ENSFALG00000001371	TRNAU1AP	96	55.714	Ficedula_albicollis
ENSXMAG00000017361	trnau1apa	93	57.639	ENSFDAG00000018599	TRNAU1AP	95	55.903	Fukomys_damarensis
ENSXMAG00000017361	trnau1apa	78	91.429	ENSFHEG00000018232	trnau1apa	84	90.400	Fundulus_heteroclitus
ENSXMAG00000017361	trnau1apa	99	63.987	ENSGMOG00000016508	trnau1apa	99	62.701	Gadus_morhua
ENSXMAG00000017361	trnau1apa	69	37.727	ENSGALG00000012721	C2H6orf52	79	37.991	Gallus_gallus
ENSXMAG00000017361	trnau1apa	93	55.903	ENSGALG00000001310	-	95	55.670	Gallus_gallus
ENSXMAG00000017361	trnau1apa	85	97.719	ENSGAFG00000004928	trnau1apa	99	97.719	Gambusia_affinis
ENSXMAG00000017361	trnau1apa	99	82.026	ENSGACG00000001443	trnau1apa	99	80.719	Gasterosteus_aculeatus
ENSXMAG00000017361	trnau1apa	90	55.957	ENSGAGG00000004940	TRNAU1AP	96	55.714	Gopherus_agassizii
ENSXMAG00000017361	trnau1apa	93	57.639	ENSGGOG00000003511	TRNAU1AP	87	65.753	Gorilla_gorilla
ENSXMAG00000017361	trnau1apa	99	94.074	ENSHBUG00000002510	trnau1apa	93	94.074	Haplochromis_burtoni
ENSXMAG00000017361	trnau1apa	93	57.639	ENSHGLG00000010380	TRNAU1AP	95	55.903	Heterocephalus_glaber_female
ENSXMAG00000017361	trnau1apa	93	55.556	ENSHGLG00100012699	TRNAU1AP	95	53.819	Heterocephalus_glaber_male
ENSXMAG00000017361	trnau1apa	99	75.080	ENSHCOG00000014770	trnau1apa	99	72.843	Hippocampus_comes
ENSXMAG00000017361	trnau1apa	93	57.639	ENSSTOG00000000079	TRNAU1AP	95	55.903	Ictidomys_tridecemlineatus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSJJAG00000010128	Trnau1ap	95	55.903	Jaculus_jaculus
ENSXMAG00000017361	trnau1apa	99	87.582	ENSKMAG00000001230	trnau1apa	99	87.582	Kryptolebias_marmoratus
ENSXMAG00000017361	trnau1apa	99	77.603	ENSLBEG00000011683	trnau1apa	99	76.115	Labrus_bergylta
ENSXMAG00000017361	trnau1apa	94	51.211	ENSLACG00000005541	TRNAU1AP	95	51.370	Latimeria_chalumnae
ENSXMAG00000017361	trnau1apa	94	60.000	ENSLOCG00000004041	trnau1apa	96	58.966	Lepisosteus_oculatus
ENSXMAG00000017361	trnau1apa	93	57.986	ENSLAFG00000007628	TRNAU1AP	95	56.250	Loxodonta_africana
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMFAG00000043751	TRNAU1AP	87	65.753	Macaca_fascicularis
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMMUG00000006561	TRNAU1AP	95	55.903	Macaca_mulatta
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMNEG00000044201	TRNAU1AP	87	65.753	Macaca_nemestrina
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMLEG00000015649	TRNAU1AP	87	65.753	Mandrillus_leucophaeus
ENSXMAG00000017361	trnau1apa	99	81.672	ENSMAMG00000001247	trnau1apa	99	78.457	Mastacembelus_armatus
ENSXMAG00000017361	trnau1apa	99	84.314	ENSMZEG00005017722	trnau1apa	99	83.007	Maylandia_zebra
ENSXMAG00000017361	trnau1apa	91	56.228	ENSMGAG00000002105	TRNAU1AP	96	55.160	Meleagris_gallopavo
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMICG00000008386	TRNAU1AP	87	65.753	Microcebus_murinus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMOCG00000011189	Trnau1ap	95	55.903	Microtus_ochrogaster
ENSXMAG00000017361	trnau1apa	99	67.742	ENSMMOG00000012107	trnau1apa	99	67.742	Mola_mola
ENSXMAG00000017361	trnau1apa	93	56.597	ENSMODG00000010927	TRNAU1AP	95	54.983	Monodelphis_domestica
ENSXMAG00000017361	trnau1apa	99	83.172	ENSMALG00000016778	trnau1apa	99	82.201	Monopterus_albus
ENSXMAG00000017361	trnau1apa	93	57.639	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	62.025	Mus_caroli
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMUSG00000028898	Trnau1ap	92	62.025	Mus_musculus
ENSXMAG00000017361	trnau1apa	93	57.639	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSXMAG00000017361	trnau1apa	93	57.639	MGP_SPRETEiJ_G0027544	Trnau1ap	92	62.025	Mus_spretus
ENSXMAG00000017361	trnau1apa	93	57.986	ENSMPUG00000015511	TRNAU1AP	95	56.250	Mustela_putorius_furo
ENSXMAG00000017361	trnau1apa	93	57.639	ENSMLUG00000012586	TRNAU1AP	95	55.903	Myotis_lucifugus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSNGAG00000015881	Trnau1ap	84	68.148	Nannospalax_galili
ENSXMAG00000017361	trnau1apa	99	70.550	ENSNBRG00000001758	trnau1apa	99	69.256	Neolamprologus_brichardi
ENSXMAG00000017361	trnau1apa	93	57.639	ENSNLEG00000009822	TRNAU1AP	87	65.753	Nomascus_leucogenys
ENSXMAG00000017361	trnau1apa	91	56.940	ENSMEUG00000006117	TRNAU1AP	96	54.448	Notamacropus_eugenii
ENSXMAG00000017361	trnau1apa	52	60.920	ENSOPRG00000007084	-	55	60.920	Ochotona_princeps
ENSXMAG00000017361	trnau1apa	93	57.639	ENSODEG00000002970	TRNAU1AP	95	55.903	Octodon_degus
ENSXMAG00000017361	trnau1apa	80	88.259	ENSONIG00000004715	trnau1apa	93	88.186	Oreochromis_niloticus
ENSXMAG00000017361	trnau1apa	98	42.053	ENSOANG00000005325	-	95	42.414	Ornithorhynchus_anatinus
ENSXMAG00000017361	trnau1apa	93	47.917	ENSOCUG00000002353	-	95	47.569	Oryctolagus_cuniculus
ENSXMAG00000017361	trnau1apa	85	45.627	ENSOCUG00000006834	-	90	47.131	Oryctolagus_cuniculus
ENSXMAG00000017361	trnau1apa	93	56.250	ENSOCUG00000011704	-	95	54.514	Oryctolagus_cuniculus
ENSXMAG00000017361	trnau1apa	99	83.007	ENSORLG00000010428	trnau1apa	99	83.007	Oryzias_latipes
ENSXMAG00000017361	trnau1apa	99	83.007	ENSORLG00020000926	trnau1ap	99	83.007	Oryzias_latipes_hni
ENSXMAG00000017361	trnau1apa	99	83.007	ENSORLG00015009858	trnau1ap	99	83.007	Oryzias_latipes_hsok
ENSXMAG00000017361	trnau1apa	99	83.333	ENSOMEG00000007873	trnau1apa	99	83.333	Oryzias_melastigma
ENSXMAG00000017361	trnau1apa	93	57.639	ENSOGAG00000002274	TRNAU1AP	95	55.903	Otolemur_garnettii
ENSXMAG00000017361	trnau1apa	93	57.292	ENSOARG00000002843	TRNAU1AP	95	55.556	Ovis_aries
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPPAG00000033927	TRNAU1AP	87	65.753	Pan_paniscus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPPRG00000004416	TRNAU1AP	95	55.903	Panthera_pardus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPTIG00000016677	TRNAU1AP	95	55.903	Panthera_tigris_altaica
ENSXMAG00000017361	trnau1apa	86	50.936	ENSPTRG00000000434	-	90	51.321	Pan_troglodytes
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPANG00000016019	TRNAU1AP	87	65.753	Papio_anubis
ENSXMAG00000017361	trnau1apa	93	58.276	ENSPKIG00000015511	trnau1apa	93	55.556	Paramormyrops_kingsleyae
ENSXMAG00000017361	trnau1apa	92	78.409	ENSPKIG00000022205	-	94	78.409	Paramormyrops_kingsleyae
ENSXMAG00000017361	trnau1apa	90	57.040	ENSPSIG00000006864	TRNAU1AP	96	55.714	Pelodiscus_sinensis
ENSXMAG00000017361	trnau1apa	97	68.771	ENSPMGG00000023893	trnau1apa	99	65.686	Periophthalmus_magnuspinnatus
ENSXMAG00000017361	trnau1apa	93	57.292	ENSPEMG00000007877	Trnau1ap	95	55.556	Peromyscus_maniculatus_bairdii
ENSXMAG00000017361	trnau1apa	74	51.528	ENSPMAG00000005934	trnau1apa	96	49.782	Petromyzon_marinus
ENSXMAG00000017361	trnau1apa	55	54.335	ENSPMAG00000000592	trnau1apa	95	54.335	Petromyzon_marinus
ENSXMAG00000017361	trnau1apa	100	99.026	ENSPFOG00000008100	trnau1apa	100	99.026	Poecilia_formosa
ENSXMAG00000017361	trnau1apa	96	98.986	ENSPLAG00000010236	trnau1apa	100	98.986	Poecilia_latipinna
ENSXMAG00000017361	trnau1apa	99	97.068	ENSPMEG00000016387	trnau1apa	97	97.068	Poecilia_mexicana
ENSXMAG00000017361	trnau1apa	88	92.391	ENSPREG00000019821	trnau1apa	99	92.391	Poecilia_reticulata
ENSXMAG00000017361	trnau1apa	84	46.743	ENSPPYG00000001639	-	95	47.126	Pongo_abelii
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPCOG00000027712	-	95	55.903	Propithecus_coquereli
ENSXMAG00000017361	trnau1apa	92	45.423	ENSPCOG00000023470	-	95	44.014	Propithecus_coquereli
ENSXMAG00000017361	trnau1apa	93	57.639	ENSPVAG00000017214	TRNAU1AP	95	55.903	Pteropus_vampyrus
ENSXMAG00000017361	trnau1apa	99	82.958	ENSPNYG00000010130	trnau1apa	96	86.400	Pundamilia_nyererei
ENSXMAG00000017361	trnau1apa	99	51.466	ENSPNAG00000024905	trnau1apa	97	50.649	Pygocentrus_nattereri
ENSXMAG00000017361	trnau1apa	92	53.521	ENSRNOG00000055344	Trnau1ap	77	58.403	Rattus_norvegicus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSRBIG00000029083	TRNAU1AP	87	65.753	Rhinopithecus_bieti
ENSXMAG00000017361	trnau1apa	93	57.639	ENSRROG00000029128	TRNAU1AP	87	65.753	Rhinopithecus_roxellana
ENSXMAG00000017361	trnau1apa	93	57.639	ENSSBOG00000021299	TRNAU1AP	87	65.753	Saimiri_boliviensis_boliviensis
ENSXMAG00000017361	trnau1apa	93	56.944	ENSSHAG00000008108	TRNAU1AP	95	55.326	Sarcophilus_harrisii
ENSXMAG00000017361	trnau1apa	99	77.346	ENSSMAG00000020851	trnau1apa	99	75.728	Scophthalmus_maximus
ENSXMAG00000017361	trnau1apa	99	80.968	ENSSDUG00000011734	trnau1apa	99	80.323	Seriola_dumerili
ENSXMAG00000017361	trnau1apa	99	66.013	ENSSLDG00000012101	trnau1apa	99	61.765	Seriola_lalandi_dorsalis
ENSXMAG00000017361	trnau1apa	91	57.651	ENSSARG00000007536	TRNAU1AP	96	55.872	Sorex_araneus
ENSXMAG00000017361	trnau1apa	98	53.465	ENSSPUG00000010400	-	99	51.948	Sphenodon_punctatus
ENSXMAG00000017361	trnau1apa	63	49.744	ENSSPUG00000010415	-	94	48.108	Sphenodon_punctatus
ENSXMAG00000017361	trnau1apa	99	84.641	ENSSPAG00000005029	trnau1apa	99	83.987	Stegastes_partitus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSSSCG00000030284	TRNAU1AP	95	55.903	Sus_scrofa
ENSXMAG00000017361	trnau1apa	69	38.249	ENSTGUG00000005908	-	99	39.437	Taeniopygia_guttata
ENSXMAG00000017361	trnau1apa	91	57.295	ENSTGUG00000000735	-	96	55.986	Taeniopygia_guttata
ENSXMAG00000017361	trnau1apa	99	79.153	ENSTRUG00000003352	trnau1apa	99	75.570	Takifugu_rubripes
ENSXMAG00000017361	trnau1apa	99	75.728	ENSTNIG00000006129	trnau1apa	99	74.110	Tetraodon_nigroviridis
ENSXMAG00000017361	trnau1apa	79	51.020	ENSTBEG00000008049	-	94	48.980	Tupaia_belangeri
ENSXMAG00000017361	trnau1apa	93	57.639	ENSTTRG00000001854	TRNAU1AP	95	55.903	Tursiops_truncatus
ENSXMAG00000017361	trnau1apa	90	57.401	ENSUAMG00000008789	TRNAU1AP	96	55.596	Ursus_americanus
ENSXMAG00000017361	trnau1apa	93	57.639	ENSUMAG00000011068	TRNAU1AP	95	55.903	Ursus_maritimus
ENSXMAG00000017361	trnau1apa	94	50.000	ENSVPAG00000006778	TRNAU1AP	96	48.333	Vicugna_pacos
ENSXMAG00000017361	trnau1apa	93	56.993	ENSVVUG00000012518	TRNAU1AP	89	55.052	Vulpes_vulpes