EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017371 (Gene tree)
Gene ID: 102223688
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5529 bases
Position: chr4:358562-364090
Accession: 102223688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017417	NOB1_Zn_bind	PF08772.11	9.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017441	-	1245	XM_005815345	ENSXMAP00000017417	414 (aa)	XP_005815402	M4ASH2

Gene Model

Click here to download ENSXMAG00000017371's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017371	nob1	100	61.905	ENSG00000141101	NOB1	97	69.697	Homo_sapiens
ENSXMAG00000017371	nob1	100	63.527	ENSAPOG00000008241	nob1	100	63.527	Acanthochromis_polyacanthus
ENSXMAG00000017371	nob1	99	61.905	ENSAMEG00000006706	NOB1	98	61.905	Ailuropoda_melanoleuca
ENSXMAG00000017371	nob1	99	66.589	ENSACIG00000001503	nob1	100	66.589	Amphilophus_citrinellus
ENSXMAG00000017371	nob1	100	70.773	ENSAOCG00000006533	nob1	100	71.981	Amphiprion_ocellaris
ENSXMAG00000017371	nob1	100	71.498	ENSAPEG00000000032	-	100	72.705	Amphiprion_percula
ENSXMAG00000017371	nob1	100	71.498	ENSAPEG00000000029	nob1	100	72.705	Amphiprion_percula
ENSXMAG00000017371	nob1	100	69.880	ENSATEG00000014585	nob1	100	69.807	Anabas_testudineus
ENSXMAG00000017371	nob1	100	59.674	ENSACAG00000003697	NOB1	88	59.674	Anolis_carolinensis
ENSXMAG00000017371	nob1	100	60.714	ENSANAG00000036611	NOB1	100	60.952	Aotus_nancymaae
ENSXMAG00000017371	nob1	100	66.744	ENSACLG00000024897	nob1	100	66.744	Astatotilapia_calliptera
ENSXMAG00000017371	nob1	94	56.075	ENSAMXG00000003642	nob1	100	58.178	Astyanax_mexicanus
ENSXMAG00000017371	nob1	100	62.708	ENSBTAG00000020633	NOB1	100	62.945	Bos_taurus
ENSXMAG00000017371	nob1	73	43.350	WBGene00021843	Y54E10BR.4	97	34.321	Caenorhabditis_elegans
ENSXMAG00000017371	nob1	100	61.190	ENSCJAG00000015230	NOB1	100	61.429	Callithrix_jacchus
ENSXMAG00000017371	nob1	99	60.337	ENSCAFG00000020251	NOB1	99	60.817	Canis_familiaris
ENSXMAG00000017371	nob1	99	60.337	ENSCAFG00020020297	NOB1	99	60.817	Canis_lupus_dingo
ENSXMAG00000017371	nob1	100	62.470	ENSCHIG00000027022	NOB1	100	62.708	Capra_hircus
ENSXMAG00000017371	nob1	100	59.330	ENSTSYG00000003084	NOB1	100	59.953	Carlito_syrichta
ENSXMAG00000017371	nob1	84	58.310	ENSCAPG00000015542	NOB1	100	59.091	Cavia_aperea
ENSXMAG00000017371	nob1	100	60.047	ENSCPOG00000022538	NOB1	100	60.714	Cavia_porcellus
ENSXMAG00000017371	nob1	100	59.953	ENSCCAG00000023773	NOB1	100	60.190	Cebus_capucinus
ENSXMAG00000017371	nob1	99	60.482	ENSCATG00000039487	NOB1	99	60.723	Cercocebus_atys
ENSXMAG00000017371	nob1	84	58.000	ENSCLAG00000005926	NOB1	100	58.807	Chinchilla_lanigera
ENSXMAG00000017371	nob1	100	60.714	ENSCSAG00000004158	NOB1	100	60.952	Chlorocebus_sabaeus
ENSXMAG00000017371	nob1	99	56.901	ENSCHOG00000011047	NOB1	99	56.901	Choloepus_hoffmanni
ENSXMAG00000017371	nob1	99	58.275	ENSCPBG00000027035	NOB1	92	58.005	Chrysemys_picta_bellii
ENSXMAG00000017371	nob1	99	45.763	ENSCING00000023441	-	99	46.135	Ciona_intestinalis
ENSXMAG00000017371	nob1	99	44.787	ENSCSAVG00000009081	-	99	45.411	Ciona_savignyi
ENSXMAG00000017371	nob1	100	59.330	ENSCGRG00001009255	Nob1	95	59.809	Cricetulus_griseus_chok1gshd
ENSXMAG00000017371	nob1	100	59.330	ENSCGRG00000010869	Nob1	100	59.809	Cricetulus_griseus_crigri
ENSXMAG00000017371	nob1	91	59.848	ENSCSEG00000019657	nob1	96	60.354	Cynoglossus_semilaevis
ENSXMAG00000017371	nob1	99	57.692	ENSDARG00000016080	nob1	100	58.145	Danio_rerio
ENSXMAG00000017371	nob1	100	61.337	ENSDNOG00000041643	NOB1	100	61.337	Dasypus_novemcinctus
ENSXMAG00000017371	nob1	100	61.483	ENSDORG00000000483	Nob1	100	61.905	Dipodomys_ordii
ENSXMAG00000017371	nob1	96	34.549	FBgn0030177	CG2972	98	34.335	Drosophila_melanogaster
ENSXMAG00000017371	nob1	100	44.337	ENSEBUG00000004464	nob1	99	44.096	Eptatretus_burgeri
ENSXMAG00000017371	nob1	100	60.993	ENSEASG00005021356	NOB1	84	61.702	Equus_asinus_asinus
ENSXMAG00000017371	nob1	100	61.229	ENSECAG00000023748	NOB1	81	61.939	Equus_caballus
ENSXMAG00000017371	nob1	68	46.667	ENSEEUG00000014384	NOB1	66	46.667	Erinaceus_europaeus
ENSXMAG00000017371	nob1	100	59.333	ENSELUG00000016199	nob1	100	58.182	Esox_lucius
ENSXMAG00000017371	nob1	100	60.621	ENSFCAG00000002958	NOB1	100	60.621	Felis_catus
ENSXMAG00000017371	nob1	50	67.130	ENSFALG00000002747	NOB1	95	63.900	Ficedula_albicollis
ENSXMAG00000017371	nob1	100	59.135	ENSFDAG00000009239	NOB1	100	59.472	Fukomys_damarensis
ENSXMAG00000017371	nob1	61	70.956	ENSFHEG00000007657	nob1	68	71.591	Fundulus_heteroclitus
ENSXMAG00000017371	nob1	99	64.234	ENSGMOG00000010638	nob1	99	64.964	Gadus_morhua
ENSXMAG00000017371	nob1	99	56.808	ENSGALG00000000693	NOB1	99	57.042	Gallus_gallus
ENSXMAG00000017371	nob1	100	80.000	ENSGAFG00000006104	nob1	100	79.565	Gambusia_affinis
ENSXMAG00000017371	nob1	99	67.146	ENSGACG00000017552	nob1	99	67.386	Gasterosteus_aculeatus
ENSXMAG00000017371	nob1	99	58.019	ENSGAGG00000003902	NOB1	99	58.019	Gopherus_agassizii
ENSXMAG00000017371	nob1	100	61.667	ENSGGOG00000025456	NOB1	100	61.905	Gorilla_gorilla
ENSXMAG00000017371	nob1	100	67.711	ENSHBUG00000002580	nob1	100	68.916	Haplochromis_burtoni
ENSXMAG00000017371	nob1	100	60.047	ENSHGLG00000014260	NOB1	100	60.047	Heterocephalus_glaber_female
ENSXMAG00000017371	nob1	100	60.238	ENSHGLG00100013978	NOB1	100	60.757	Heterocephalus_glaber_male
ENSXMAG00000017371	nob1	99	61.792	ENSHCOG00000006699	nob1	100	62.061	Hippocampus_comes
ENSXMAG00000017371	nob1	100	52.610	ENSIPUG00000007579	nob1	100	53.027	Ictalurus_punctatus
ENSXMAG00000017371	nob1	100	60.287	ENSSTOG00000001204	NOB1	100	60.766	Ictidomys_tridecemlineatus
ENSXMAG00000017371	nob1	99	59.952	ENSJJAG00000015543	Nob1	99	60.671	Jaculus_jaculus
ENSXMAG00000017371	nob1	100	70.096	ENSKMAG00000018220	nob1	100	70.142	Kryptolebias_marmoratus
ENSXMAG00000017371	nob1	100	65.468	ENSLBEG00000026375	nob1	100	66.427	Labrus_bergylta
ENSXMAG00000017371	nob1	100	57.500	ENSLACG00000006973	NOB1	100	55.677	Latimeria_chalumnae
ENSXMAG00000017371	nob1	100	59.645	ENSLOCG00000001411	nob1	99	60.619	Lepisosteus_oculatus
ENSXMAG00000017371	nob1	100	61.321	ENSLAFG00000008978	NOB1	100	61.792	Loxodonta_africana
ENSXMAG00000017371	nob1	100	60.952	ENSMFAG00000030131	NOB1	100	61.190	Macaca_fascicularis
ENSXMAG00000017371	nob1	100	60.952	ENSMMUG00000006506	NOB1	100	61.190	Macaca_mulatta
ENSXMAG00000017371	nob1	100	60.714	ENSMNEG00000028829	NOB1	100	55.952	Macaca_nemestrina
ENSXMAG00000017371	nob1	100	60.714	ENSMLEG00000032913	NOB1	100	60.952	Mandrillus_leucophaeus
ENSXMAG00000017371	nob1	100	68.434	ENSMZEG00005028346	nob1	100	67.064	Maylandia_zebra
ENSXMAG00000017371	nob1	66	65.517	ENSMZEG00005003827	-	88	65.517	Maylandia_zebra
ENSXMAG00000017371	nob1	62	60.902	ENSMGAG00000008675	NOB1	98	63.019	Meleagris_gallopavo
ENSXMAG00000017371	nob1	100	56.938	ENSMAUG00000013554	Nob1	100	57.177	Mesocricetus_auratus
ENSXMAG00000017371	nob1	100	61.045	ENSMICG00000012123	NOB1	100	61.848	Microcebus_murinus
ENSXMAG00000017371	nob1	100	60.526	ENSMOCG00000010370	Nob1	100	61.483	Microtus_ochrogaster
ENSXMAG00000017371	nob1	100	65.421	ENSMMOG00000002120	nob1	100	67.381	Mola_mola
ENSXMAG00000017371	nob1	99	58.019	ENSMODG00000002677	NOB1	99	58.451	Monodelphis_domestica
ENSXMAG00000017371	nob1	99	68.281	ENSMALG00000014580	nob1	100	68.765	Monopterus_albus
ENSXMAG00000017371	nob1	100	60.476	MGP_CAROLIEiJ_G0031536	Nob1	98	60.476	Mus_caroli
ENSXMAG00000017371	nob1	100	60.238	ENSMUSG00000003848	Nob1	100	60.238	Mus_musculus
ENSXMAG00000017371	nob1	100	60.287	MGP_PahariEiJ_G0023136	Nob1	100	60.766	Mus_pahari
ENSXMAG00000017371	nob1	100	60.952	MGP_SPRETEiJ_G0032654	Nob1	98	61.429	Mus_spretus
ENSXMAG00000017371	nob1	99	61.429	ENSMPUG00000007483	NOB1	91	62.381	Mustela_putorius_furo
ENSXMAG00000017371	nob1	100	61.483	ENSMLUG00000006667	NOB1	100	61.905	Myotis_lucifugus
ENSXMAG00000017371	nob1	100	60.526	ENSNGAG00000008627	Nob1	100	60.766	Nannospalax_galili
ENSXMAG00000017371	nob1	100	61.190	ENSNLEG00000005572	NOB1	100	61.429	Nomascus_leucogenys
ENSXMAG00000017371	nob1	79	56.287	ENSOPRG00000006721	NOB1	100	57.485	Ochotona_princeps
ENSXMAG00000017371	nob1	99	61.259	ENSODEG00000014376	NOB1	99	61.259	Octodon_degus
ENSXMAG00000017371	nob1	99	64.798	ENSONIG00000003319	nob1	100	65.247	Oreochromis_niloticus
ENSXMAG00000017371	nob1	84	60.563	ENSOCUG00000004400	NOB1	100	60.563	Oryctolagus_cuniculus
ENSXMAG00000017371	nob1	100	68.900	ENSORLG00000018862	nob1	100	68.735	Oryzias_latipes
ENSXMAG00000017371	nob1	100	69.565	ENSORLG00020014687	nob1	100	69.565	Oryzias_latipes_hni
ENSXMAG00000017371	nob1	100	67.943	ENSORLG00015012156	nob1	100	68.258	Oryzias_latipes_hsok
ENSXMAG00000017371	nob1	100	63.617	ENSOMEG00000022722	nob1	100	63.871	Oryzias_melastigma
ENSXMAG00000017371	nob1	99	57.349	ENSOGAG00000004590	NOB1	99	57.590	Otolemur_garnettii
ENSXMAG00000017371	nob1	100	60.000	ENSOARG00000003606	NOB1	100	62.470	Ovis_aries
ENSXMAG00000017371	nob1	97	54.412	ENSPPAG00000003317	-	100	54.902	Pan_paniscus
ENSXMAG00000017371	nob1	100	61.905	ENSPPAG00000040257	NOB1	100	62.143	Pan_paniscus
ENSXMAG00000017371	nob1	100	61.045	ENSPPRG00000016949	NOB1	100	61.520	Panthera_pardus
ENSXMAG00000017371	nob1	100	61.045	ENSPTIG00000011234	NOB1	100	61.520	Panthera_tigris_altaica
ENSXMAG00000017371	nob1	100	61.667	ENSPTRG00000008285	NOB1	100	61.905	Pan_troglodytes
ENSXMAG00000017371	nob1	100	61.190	ENSPANG00000015858	NOB1	100	61.190	Papio_anubis
ENSXMAG00000017371	nob1	100	61.557	ENSPKIG00000020293	nob1	100	62.118	Paramormyrops_kingsleyae
ENSXMAG00000017371	nob1	99	56.000	ENSPSIG00000012477	NOB1	99	57.851	Pelodiscus_sinensis
ENSXMAG00000017371	nob1	99	64.976	ENSPMGG00000023476	nob1	100	67.633	Periophthalmus_magnuspinnatus
ENSXMAG00000017371	nob1	100	61.483	ENSPEMG00000010995	Nob1	100	61.483	Peromyscus_maniculatus_bairdii
ENSXMAG00000017371	nob1	84	80.328	ENSPFOG00000000027	nob1	100	80.055	Poecilia_formosa
ENSXMAG00000017371	nob1	64	89.474	ENSPLAG00000011546	nob1	94	89.888	Poecilia_latipinna
ENSXMAG00000017371	nob1	100	90.120	ENSPMEG00000023435	nob1	100	90.120	Poecilia_mexicana
ENSXMAG00000017371	nob1	99	81.128	ENSPREG00000007675	nob1	100	80.260	Poecilia_reticulata
ENSXMAG00000017371	nob1	100	61.905	ENSPPYG00000007509	NOB1	100	61.905	Pongo_abelii
ENSXMAG00000017371	nob1	100	58.907	ENSPCAG00000001527	NOB1	100	58.810	Procavia_capensis
ENSXMAG00000017371	nob1	100	62.470	ENSPCOG00000025515	NOB1	100	62.945	Propithecus_coquereli
ENSXMAG00000017371	nob1	78	41.945	ENSPVAG00000013330	NOB1	78	41.945	Pteropus_vampyrus
ENSXMAG00000017371	nob1	100	68.193	ENSPNYG00000018449	nob1	100	67.391	Pundamilia_nyererei
ENSXMAG00000017371	nob1	100	55.955	ENSPNAG00000004244	nob1	99	57.823	Pygocentrus_nattereri
ENSXMAG00000017371	nob1	100	59.762	ENSRNOG00000021890	Nob1	100	60.238	Rattus_norvegicus
ENSXMAG00000017371	nob1	100	60.471	ENSRBIG00000019599	NOB1	100	61.667	Rhinopithecus_bieti
ENSXMAG00000017371	nob1	100	60.471	ENSRROG00000033419	NOB1	100	61.667	Rhinopithecus_roxellana
ENSXMAG00000017371	nob1	84	59.887	ENSSBOG00000029042	NOB1	89	60.169	Saimiri_boliviensis_boliviensis
ENSXMAG00000017371	nob1	99	61.005	ENSSHAG00000015387	NOB1	99	60.671	Sarcophilus_harrisii
ENSXMAG00000017371	nob1	100	58.904	ENSSFOG00015008503	nob1	100	58.957	Scleropages_formosus
ENSXMAG00000017371	nob1	100	66.357	ENSSMAG00000003064	nob1	100	70.504	Scophthalmus_maximus
ENSXMAG00000017371	nob1	100	68.496	ENSSDUG00000007307	nob1	100	68.496	Seriola_dumerili
ENSXMAG00000017371	nob1	62	81.287	ENSSLDG00000011459	-	86	81.287	Seriola_lalandi_dorsalis
ENSXMAG00000017371	nob1	94	55.443	ENSSPUG00000005621	NOB1	99	60.000	Sphenodon_punctatus
ENSXMAG00000017371	nob1	100	71.014	ENSSPAG00000022362	nob1	100	71.498	Stegastes_partitus
ENSXMAG00000017371	nob1	100	61.429	ENSSSCG00000002753	NOB1	100	62.708	Sus_scrofa
ENSXMAG00000017371	nob1	50	68.372	ENSTGUG00000008124	NOB1	97	67.411	Taeniopygia_guttata
ENSXMAG00000017371	nob1	99	64.318	ENSTRUG00000023145	nob1	100	64.545	Takifugu_rubripes
ENSXMAG00000017371	nob1	99	64.318	ENSTRUG00000004780	nob1	100	64.545	Takifugu_rubripes
ENSXMAG00000017371	nob1	99	68.483	ENSTNIG00000002552	nob1	100	68.483	Tetraodon_nigroviridis
ENSXMAG00000017371	nob1	59	50.196	ENSTBEG00000000690	NOB1	52	51.779	Tupaia_belangeri
ENSXMAG00000017371	nob1	61	64.314	ENSUAMG00000028135	NOB1	99	65.098	Ursus_americanus
ENSXMAG00000017371	nob1	99	61.575	ENSUMAG00000018658	NOB1	94	62.053	Ursus_maritimus
ENSXMAG00000017371	nob1	99	60.577	ENSVVUG00000017271	NOB1	99	61.058	Vulpes_vulpes
ENSXMAG00000017371	nob1	100	57.437	ENSXETG00000017874	nob1	99	57.437	Xenopus_tropicalis
ENSXMAG00000017371	nob1	80	92.216	ENSXCOG00000009734	nob1	100	92.216	Xiphophorus_couchianus