EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017414 (Gene tree)
Gene ID: 102234549
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10724 bases
Position: chr5:10920089-10930812
Accession: 102234549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017472	U3_assoc_6	PF08640.11	1.1e-24	1	1
ENSXMAP00000034820	U3_assoc_6	PF08640.11	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036843	-	1839	-	ENSXMAP00000034820	612 (aa)	-	-
ENSXMAT00000017497	-	1839	XM_005809069	ENSXMAP00000017472	595 (aa)	XP_005809126	M4ASM7

Gene Model

Click here to download ENSXMAG00000017414's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017414	utp6	100	55.779	ENSG00000108651	UTP6	100	55.779	Homo_sapiens
ENSXMAG00000017414	utp6	100	87.059	ENSAPOG00000000435	utp6	100	87.059	Acanthochromis_polyacanthus
ENSXMAG00000017414	utp6	99	54.866	ENSAMEG00000005443	UTP6	99	54.866	Ailuropoda_melanoleuca
ENSXMAG00000017414	utp6	100	81.849	ENSACIG00000004124	utp6	100	81.849	Amphilophus_citrinellus
ENSXMAG00000017414	utp6	100	85.882	ENSAOCG00000016812	utp6	100	85.882	Amphiprion_ocellaris
ENSXMAG00000017414	utp6	100	85.882	ENSAPEG00000023565	utp6	100	85.882	Amphiprion_percula
ENSXMAG00000017414	utp6	100	87.059	ENSATEG00000003401	utp6	100	87.059	Anabas_testudineus
ENSXMAG00000017414	utp6	99	55.348	ENSAPLG00000005821	UTP6	99	55.348	Anas_platyrhynchos
ENSXMAG00000017414	utp6	100	57.789	ENSACAG00000009472	UTP6	100	57.789	Anolis_carolinensis
ENSXMAG00000017414	utp6	100	55.779	ENSANAG00000034603	UTP6	100	55.779	Aotus_nancymaae
ENSXMAG00000017414	utp6	100	85.378	ENSACLG00000006728	utp6	100	85.378	Astatotilapia_calliptera
ENSXMAG00000017414	utp6	100	72.269	ENSAMXG00000009478	utp6	100	72.269	Astyanax_mexicanus
ENSXMAG00000017414	utp6	100	52.843	ENSBTAG00000015612	UTP6	100	52.843	Bos_taurus
ENSXMAG00000017414	utp6	100	51.338	ENSBTAG00000003769	-	98	51.338	Bos_taurus
ENSXMAG00000017414	utp6	100	55.779	ENSCJAG00000014115	UTP6	100	55.779	Callithrix_jacchus
ENSXMAG00000017414	utp6	100	55.017	ENSCAFG00000018507	UTP6	100	55.017	Canis_familiaris
ENSXMAG00000017414	utp6	100	55.017	ENSCAFG00020014678	UTP6	100	55.017	Canis_lupus_dingo
ENSXMAG00000017414	utp6	100	52.667	ENSCHIG00000009726	-	100	52.667	Capra_hircus
ENSXMAG00000017414	utp6	100	52.667	ENSCHIG00000017954	-	100	52.667	Capra_hircus
ENSXMAG00000017414	utp6	99	50.334	ENSTSYG00000002202	UTP6	99	50.334	Carlito_syrichta
ENSXMAG00000017414	utp6	89	46.961	ENSCAPG00000017595	UTP6	93	48.932	Cavia_aperea
ENSXMAG00000017414	utp6	99	55.705	ENSCPOG00000014294	UTP6	100	55.705	Cavia_porcellus
ENSXMAG00000017414	utp6	100	51.424	ENSCCAG00000033318	-	100	51.424	Cebus_capucinus
ENSXMAG00000017414	utp6	100	54.849	ENSCATG00000034868	UTP6	100	54.849	Cercocebus_atys
ENSXMAG00000017414	utp6	99	55.872	ENSCLAG00000007274	UTP6	99	55.872	Chinchilla_lanigera
ENSXMAG00000017414	utp6	100	54.682	ENSCSAG00000006595	UTP6	100	54.682	Chlorocebus_sabaeus
ENSXMAG00000017414	utp6	73	46.739	ENSCHOG00000010940	-	73	46.739	Choloepus_hoffmanni
ENSXMAG00000017414	utp6	100	59.464	ENSCPBG00000004652	UTP6	100	59.464	Chrysemys_picta_bellii
ENSXMAG00000017414	utp6	99	31.220	ENSCING00000022947	-	99	31.220	Ciona_intestinalis
ENSXMAG00000017414	utp6	54	37.003	ENSCSAVG00000011416	-	99	37.003	Ciona_savignyi
ENSXMAG00000017414	utp6	87	40.458	ENSCANG00000031141	UTP6	89	39.504	Colobus_angolensis_palliatus
ENSXMAG00000017414	utp6	99	54.774	ENSCGRG00001000046	Utp6	100	54.774	Cricetulus_griseus_chok1gshd
ENSXMAG00000017414	utp6	95	53.534	ENSCGRG00000011543	Utp6	100	53.534	Cricetulus_griseus_crigri
ENSXMAG00000017414	utp6	100	74.832	ENSCSEG00000013422	utp6	100	88.525	Cynoglossus_semilaevis
ENSXMAG00000017414	utp6	100	90.420	ENSCVAG00000020322	utp6	100	90.420	Cyprinodon_variegatus
ENSXMAG00000017414	utp6	100	70.252	ENSDARG00000098433	utp6	100	79.558	Danio_rerio
ENSXMAG00000017414	utp6	100	55.518	ENSDNOG00000037018	UTP6	100	55.518	Dasypus_novemcinctus
ENSXMAG00000017414	utp6	95	53.628	ENSDORG00000003843	Utp6	99	56.250	Dipodomys_ordii
ENSXMAG00000017414	utp6	100	55.593	ENSEASG00005010870	UTP6	100	55.593	Equus_asinus_asinus
ENSXMAG00000017414	utp6	100	55.351	ENSECAG00000022217	UTP6	100	55.351	Equus_caballus
ENSXMAG00000017414	utp6	100	74.958	ENSELUG00000006618	utp6	100	74.958	Esox_lucius
ENSXMAG00000017414	utp6	100	53.833	ENSFCAG00000015795	UTP6	100	53.300	Felis_catus
ENSXMAG00000017414	utp6	100	58.459	ENSFALG00000002282	UTP6	100	58.459	Ficedula_albicollis
ENSXMAG00000017414	utp6	99	55.537	ENSFDAG00000019506	UTP6	100	55.537	Fukomys_damarensis
ENSXMAG00000017414	utp6	100	87.563	ENSFHEG00000010373	utp6	100	87.563	Fundulus_heteroclitus
ENSXMAG00000017414	utp6	100	73.445	ENSGMOG00000011958	utp6	100	73.445	Gadus_morhua
ENSXMAG00000017414	utp6	100	58.626	ENSGALG00000003260	UTP6	100	58.626	Gallus_gallus
ENSXMAG00000017414	utp6	100	96.975	ENSGAFG00000008505	utp6	100	96.975	Gambusia_affinis
ENSXMAG00000017414	utp6	100	84.034	ENSGACG00000019424	utp6	100	84.034	Gasterosteus_aculeatus
ENSXMAG00000017414	utp6	100	58.794	ENSGAGG00000004820	UTP6	100	58.794	Gopherus_agassizii
ENSXMAG00000017414	utp6	100	45.973	ENSGGOG00000026003	-	100	45.973	Gorilla_gorilla
ENSXMAG00000017414	utp6	100	56.114	ENSGGOG00000013569	UTP6	100	56.114	Gorilla_gorilla
ENSXMAG00000017414	utp6	100	85.378	ENSHBUG00000018668	utp6	100	85.378	Haplochromis_burtoni
ENSXMAG00000017414	utp6	99	55.537	ENSHGLG00000010332	UTP6	100	55.537	Heterocephalus_glaber_female
ENSXMAG00000017414	utp6	99	51.939	ENSHGLG00000008642	-	99	51.939	Heterocephalus_glaber_female
ENSXMAG00000017414	utp6	95	52.993	ENSHGLG00100006047	-	99	52.993	Heterocephalus_glaber_male
ENSXMAG00000017414	utp6	99	52.852	ENSHGLG00100014271	-	100	52.852	Heterocephalus_glaber_male
ENSXMAG00000017414	utp6	100	78.655	ENSHCOG00000017277	utp6	100	78.655	Hippocampus_comes
ENSXMAG00000017414	utp6	100	70.588	ENSIPUG00000022587	Utp6	100	70.588	Ictalurus_punctatus
ENSXMAG00000017414	utp6	99	56.856	ENSSTOG00000015875	UTP6	100	56.856	Ictidomys_tridecemlineatus
ENSXMAG00000017414	utp6	100	87.395	ENSKMAG00000021631	utp6	100	87.395	Kryptolebias_marmoratus
ENSXMAG00000017414	utp6	100	85.042	ENSLBEG00000002115	utp6	100	85.042	Labrus_bergylta
ENSXMAG00000017414	utp6	100	62.312	ENSLACG00000017158	UTP6	100	62.312	Latimeria_chalumnae
ENSXMAG00000017414	utp6	91	67.706	ENSLOCG00000013797	utp6	90	67.706	Lepisosteus_oculatus
ENSXMAG00000017414	utp6	100	55.426	ENSLAFG00000013008	UTP6	100	55.426	Loxodonta_africana
ENSXMAG00000017414	utp6	85	45.277	ENSMFAG00000041904	-	94	45.596	Macaca_fascicularis
ENSXMAG00000017414	utp6	100	54.515	ENSMFAG00000038842	UTP6	100	54.515	Macaca_fascicularis
ENSXMAG00000017414	utp6	100	54.515	ENSMMUG00000020403	UTP6	100	54.515	Macaca_mulatta
ENSXMAG00000017414	utp6	100	54.515	ENSMNEG00000039480	UTP6	100	54.515	Macaca_nemestrina
ENSXMAG00000017414	utp6	100	43.980	ENSMLEG00000039364	-	100	43.645	Mandrillus_leucophaeus
ENSXMAG00000017414	utp6	100	48.997	ENSMLEG00000032174	UTP6	100	48.829	Mandrillus_leucophaeus
ENSXMAG00000017414	utp6	100	85.546	ENSMAMG00000002228	utp6	99	85.546	Mastacembelus_armatus
ENSXMAG00000017414	utp6	100	85.378	ENSMZEG00005023895	utp6	100	85.378	Maylandia_zebra
ENSXMAG00000017414	utp6	95	56.866	ENSMGAG00000008111	UTP6	100	56.866	Meleagris_gallopavo
ENSXMAG00000017414	utp6	99	54.682	ENSMAUG00000021895	Utp6	100	54.682	Mesocricetus_auratus
ENSXMAG00000017414	utp6	100	54.758	ENSMICG00000002632	UTP6	100	54.758	Microcebus_murinus
ENSXMAG00000017414	utp6	99	55.017	ENSMOCG00000014163	Utp6	100	55.017	Microtus_ochrogaster
ENSXMAG00000017414	utp6	100	80.504	ENSMMOG00000008653	utp6	100	84.746	Mola_mola
ENSXMAG00000017414	utp6	100	57.571	ENSMODG00000019206	UTP6	100	57.571	Monodelphis_domestica
ENSXMAG00000017414	utp6	100	86.050	ENSMALG00000021112	utp6	100	86.050	Monopterus_albus
ENSXMAG00000017414	utp6	99	54.348	MGP_CAROLIEiJ_G0016828	Utp6	100	54.348	Mus_caroli
ENSXMAG00000017414	utp6	99	54.348	ENSMUSG00000035575	Utp6	100	54.348	Mus_musculus
ENSXMAG00000017414	utp6	99	51.003	MGP_PahariEiJ_G0017965	Utp6	100	51.338	Mus_pahari
ENSXMAG00000017414	utp6	99	54.181	MGP_SPRETEiJ_G0017672	Utp6	100	54.181	Mus_spretus
ENSXMAG00000017414	utp6	100	54.104	ENSMPUG00000014581	UTP6	100	54.104	Mustela_putorius_furo
ENSXMAG00000017414	utp6	100	55.760	ENSMLUG00000016422	UTP6	100	55.760	Myotis_lucifugus
ENSXMAG00000017414	utp6	99	56.187	ENSNGAG00000015482	Utp6	100	56.187	Nannospalax_galili
ENSXMAG00000017414	utp6	100	85.378	ENSNBRG00000019714	utp6	100	85.378	Neolamprologus_brichardi
ENSXMAG00000017414	utp6	100	55.109	ENSNLEG00000011009	UTP6	100	55.109	Nomascus_leucogenys
ENSXMAG00000017414	utp6	76	69.512	ENSOPRG00000008446	-	79	69.512	Ochotona_princeps
ENSXMAG00000017414	utp6	66	61.603	ENSODEG00000011971	UTP6	98	61.603	Octodon_degus
ENSXMAG00000017414	utp6	100	84.706	ENSONIG00000018090	utp6	100	84.706	Oreochromis_niloticus
ENSXMAG00000017414	utp6	98	56.973	ENSOANG00000004279	UTP6	99	56.973	Ornithorhynchus_anatinus
ENSXMAG00000017414	utp6	99	54.013	ENSOCUG00000016980	UTP6	99	54.013	Oryctolagus_cuniculus
ENSXMAG00000017414	utp6	99	83.333	ENSORLG00000003546	utp6	64	83.333	Oryzias_latipes
ENSXMAG00000017414	utp6	99	83.333	ENSORLG00020010377	utp6	99	83.333	Oryzias_latipes_hni
ENSXMAG00000017414	utp6	99	82.997	ENSORLG00015008893	utp6	99	82.997	Oryzias_latipes_hsok
ENSXMAG00000017414	utp6	100	83.025	ENSOMEG00000017487	utp6	100	83.025	Oryzias_melastigma
ENSXMAG00000017414	utp6	87	48.952	ENSOGAG00000004511	UTP6	100	48.762	Otolemur_garnettii
ENSXMAG00000017414	utp6	100	52.833	ENSOARG00000013474	UTP6	100	52.588	Ovis_aries
ENSXMAG00000017414	utp6	100	45.973	ENSPPAG00000016895	-	100	45.973	Pan_paniscus
ENSXMAG00000017414	utp6	100	55.946	ENSPPAG00000038089	UTP6	100	55.946	Pan_paniscus
ENSXMAG00000017414	utp6	100	56.260	ENSPPRG00000001010	UTP6	100	56.260	Panthera_pardus
ENSXMAG00000017414	utp6	100	56.260	ENSPTIG00000013913	UTP6	100	56.260	Panthera_tigris_altaica
ENSXMAG00000017414	utp6	100	46.141	ENSPTRG00000044798	-	100	46.141	Pan_troglodytes
ENSXMAG00000017414	utp6	100	55.946	ENSPTRG00000008977	UTP6	100	55.946	Pan_troglodytes
ENSXMAG00000017414	utp6	100	52.421	ENSPANG00000023113	UTP6	100	52.421	Papio_anubis
ENSXMAG00000017414	utp6	99	43.719	ENSPANG00000034274	-	100	43.384	Papio_anubis
ENSXMAG00000017414	utp6	100	69.231	ENSPKIG00000004653	utp6	100	69.231	Paramormyrops_kingsleyae
ENSXMAG00000017414	utp6	100	59.060	ENSPSIG00000012435	UTP6	100	59.060	Pelodiscus_sinensis
ENSXMAG00000017414	utp6	100	82.857	ENSPMGG00000009548	utp6	100	82.857	Periophthalmus_magnuspinnatus
ENSXMAG00000017414	utp6	99	54.348	ENSPEMG00000014081	Utp6	100	54.348	Peromyscus_maniculatus_bairdii
ENSXMAG00000017414	utp6	93	43.110	ENSPMAG00000009561	utp6	100	43.110	Petromyzon_marinus
ENSXMAG00000017414	utp6	100	59.799	ENSPCIG00000029968	UTP6	86	59.799	Phascolarctos_cinereus
ENSXMAG00000017414	utp6	100	94.454	ENSPFOG00000013918	utp6	100	94.454	Poecilia_formosa
ENSXMAG00000017414	utp6	100	94.286	ENSPLAG00000017825	utp6	100	94.286	Poecilia_latipinna
ENSXMAG00000017414	utp6	100	94.790	ENSPMEG00000008133	utp6	100	94.790	Poecilia_mexicana
ENSXMAG00000017414	utp6	100	92.437	ENSPREG00000013108	utp6	99	92.437	Poecilia_reticulata
ENSXMAG00000017414	utp6	100	53.099	ENSPPYG00000008154	UTP6	100	53.099	Pongo_abelii
ENSXMAG00000017414	utp6	100	54.591	ENSPCOG00000010224	UTP6	100	54.591	Propithecus_coquereli
ENSXMAG00000017414	utp6	100	52.254	ENSPVAG00000015759	UTP6	100	52.254	Pteropus_vampyrus
ENSXMAG00000017414	utp6	100	85.042	ENSPNYG00000002290	utp6	100	85.042	Pundamilia_nyererei
ENSXMAG00000017414	utp6	100	68.908	ENSPNAG00000027370	utp6	100	68.908	Pygocentrus_nattereri
ENSXMAG00000017414	utp6	99	54.181	ENSRNOG00000014209	Utp6	100	54.181	Rattus_norvegicus
ENSXMAG00000017414	utp6	100	54.348	ENSRBIG00000020822	UTP6	100	54.348	Rhinopithecus_bieti
ENSXMAG00000017414	utp6	100	54.348	ENSRROG00000036838	UTP6	100	54.348	Rhinopithecus_roxellana
ENSXMAG00000017414	utp6	52	56.656	ENSSHAG00000018792	-	96	61.695	Sarcophilus_harrisii
ENSXMAG00000017414	utp6	100	70.569	ENSSFOG00015005978	utp6	100	70.569	Scleropages_formosus
ENSXMAG00000017414	utp6	100	87.395	ENSSMAG00000014772	utp6	100	87.395	Scophthalmus_maximus
ENSXMAG00000017414	utp6	100	87.899	ENSSDUG00000000329	utp6	100	87.899	Seriola_dumerili
ENSXMAG00000017414	utp6	100	87.059	ENSSLDG00000016724	utp6	100	87.059	Seriola_lalandi_dorsalis
ENSXMAG00000017414	utp6	99	48.826	ENSSARG00000010778	UTP6	99	48.826	Sorex_araneus
ENSXMAG00000017414	utp6	100	60.302	ENSSPUG00000005273	UTP6	100	60.302	Sphenodon_punctatus
ENSXMAG00000017414	utp6	100	84.874	ENSSPAG00000011871	utp6	99	84.874	Stegastes_partitus
ENSXMAG00000017414	utp6	100	56.260	ENSSSCG00000017745	UTP6	100	56.260	Sus_scrofa
ENSXMAG00000017414	utp6	100	58.124	ENSTGUG00000004999	UTP6	100	58.124	Taeniopygia_guttata
ENSXMAG00000017414	utp6	99	80.471	ENSTRUG00000012005	utp6	100	80.471	Takifugu_rubripes
ENSXMAG00000017414	utp6	99	79.293	ENSTNIG00000003235	utp6	100	79.293	Tetraodon_nigroviridis
ENSXMAG00000017414	utp6	67	56.906	ENSTBEG00000005388	-	67	56.906	Tupaia_belangeri
ENSXMAG00000017414	utp6	100	55.092	ENSTTRG00000009911	UTP6	100	55.092	Tursiops_truncatus
ENSXMAG00000017414	utp6	99	54.866	ENSUMAG00000015139	UTP6	99	54.866	Ursus_maritimus
ENSXMAG00000017414	utp6	100	55.092	ENSVPAG00000005782	UTP6	100	55.092	Vicugna_pacos
ENSXMAG00000017414	utp6	100	55.184	ENSVVUG00000012238	UTP6	100	55.184	Vulpes_vulpes
ENSXMAG00000017414	utp6	100	50.586	ENSXETG00000020057	utp6	100	50.586	Xenopus_tropicalis
ENSXMAG00000017414	utp6	100	98.827	ENSXCOG00000013626	utp6	100	98.827	Xiphophorus_couchianus