EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017524 (Gene tree)
Gene ID: 102229425
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 33633 bases
Position: chr11:29261324-29294956
Accession: 102229425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017594	Exo_endo_phos	PF03372.23	1.9e-14	1	1
ENSXMAP00000024024	Exo_endo_phos	PF03372.23	2e-14	1	1
ENSXMAP00000026261	Exo_endo_phos	PF03372.23	3e-14	1	1
ENSXMAP00000028390	Exo_endo_phos	PF03372.23	3e-14	1	1
ENSXMAP00000026261	DUF1866	PF08952.11	6.4e-56	1	1
ENSXMAP00000028390	DUF1866	PF08952.11	6.5e-56	1	1
ENSXMAP00000017594	DUF1866	PF08952.11	1.3e-55	1	1
ENSXMAP00000024024	DUF1866	PF08952.11	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029092	-	9274	-	ENSXMAP00000026261	1647 (aa)	-	-
ENSXMAT00000017619	-	9241	-	ENSXMAP00000017594	1317 (aa)	-	M4ASZ9
ENSXMAT00000030986	-	9319	-	ENSXMAP00000024024	1343 (aa)	-	-
ENSXMAT00000024592	-	9295	XM_014471788	ENSXMAP00000028390	1654 (aa)	XP_014327274	-

Gene Model

Click here to download ENSXMAG00000017524's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00562	Inositol phosphate metabolism	KEGG
xma01100	Metabolic pathways	KEGG
xma04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017524	synj1	100	68.510	ENSG00000159082	SYNJ1	100	82.022	Homo_sapiens
ENSXMAG00000017524	synj1	100	87.611	ENSAPOG00000002809	synj1	100	88.567	Acanthochromis_polyacanthus
ENSXMAG00000017524	synj1	96	68.151	ENSAMEG00000015028	SYNJ1	83	63.566	Ailuropoda_melanoleuca
ENSXMAG00000017524	synj1	99	87.085	ENSACIG00000008857	synj1	99	85.650	Amphilophus_citrinellus
ENSXMAG00000017524	synj1	100	89.580	ENSAOCG00000009835	synj1	100	89.037	Amphiprion_ocellaris
ENSXMAG00000017524	synj1	100	88.182	ENSAPEG00000021010	synj1	99	81.705	Amphiprion_percula
ENSXMAG00000017524	synj1	100	87.575	ENSATEG00000002306	synj1	99	81.694	Anabas_testudineus
ENSXMAG00000017524	synj1	91	68.804	ENSAPLG00000011832	SYNJ1	85	62.929	Anas_platyrhynchos
ENSXMAG00000017524	synj1	96	68.802	ENSACAG00000003006	-	84	77.364	Anolis_carolinensis
ENSXMAG00000017524	synj1	100	68.091	ENSANAG00000027325	SYNJ1	100	67.184	Aotus_nancymaae
ENSXMAG00000017524	synj1	100	89.640	ENSACLG00000002255	synj1	100	88.739	Astatotilapia_calliptera
ENSXMAG00000017524	synj1	99	82.803	ENSAMXG00000008208	synj1	84	80.000	Astyanax_mexicanus
ENSXMAG00000017524	synj1	96	70.146	ENSBTAG00000003063	SYNJ1	100	67.013	Bos_taurus
ENSXMAG00000017524	synj1	100	68.018	ENSCJAG00000009187	SYNJ1	100	67.183	Callithrix_jacchus
ENSXMAG00000017524	synj1	96	68.143	ENSCAFG00000009041	SYNJ1	99	67.094	Canis_familiaris
ENSXMAG00000017524	synj1	100	67.737	ENSCAFG00020025776	SYNJ1	85	72.952	Canis_lupus_dingo
ENSXMAG00000017524	synj1	90	73.641	ENSCHIG00000005095	SYNJ1	77	72.301	Capra_hircus
ENSXMAG00000017524	synj1	100	67.937	ENSTSYG00000014541	SYNJ1	100	66.593	Carlito_syrichta
ENSXMAG00000017524	synj1	90	73.282	ENSCAPG00000014483	SYNJ1	81	73.282	Cavia_aperea
ENSXMAG00000017524	synj1	96	70.656	ENSCPOG00000012182	SYNJ1	99	64.219	Cavia_porcellus
ENSXMAG00000017524	synj1	100	67.574	ENSCCAG00000020825	SYNJ1	92	69.771	Cebus_capucinus
ENSXMAG00000017524	synj1	100	68.694	ENSCATG00000033891	SYNJ1	100	67.386	Cercocebus_atys
ENSXMAG00000017524	synj1	98	66.249	ENSCLAG00000009796	SYNJ1	100	80.939	Chinchilla_lanigera
ENSXMAG00000017524	synj1	100	67.784	ENSCSAG00000009654	SYNJ1	83	76.342	Chlorocebus_sabaeus
ENSXMAG00000017524	synj1	74	71.429	ENSCHOG00000012390	SYNJ1	54	72.897	Choloepus_hoffmanni
ENSXMAG00000017524	synj1	90	73.295	ENSCPBG00000006402	SYNJ1	96	69.656	Chrysemys_picta_bellii
ENSXMAG00000017524	synj1	100	69.213	ENSCANG00000031359	SYNJ1	84	76.342	Colobus_angolensis_palliatus
ENSXMAG00000017524	synj1	100	69.294	ENSCGRG00001010861	Synj1	84	75.475	Cricetulus_griseus_chok1gshd
ENSXMAG00000017524	synj1	100	69.294	ENSCGRG00000015749	Synj1	100	80.654	Cricetulus_griseus_crigri
ENSXMAG00000017524	synj1	95	88.862	ENSCSEG00000019614	synj1	97	90.756	Cynoglossus_semilaevis
ENSXMAG00000017524	synj1	100	94.292	ENSCVAG00000019250	synj1	100	93.699	Cyprinodon_variegatus
ENSXMAG00000017524	synj1	100	81.859	ENSDARG00000025011	synj1	99	82.803	Danio_rerio
ENSXMAG00000017524	synj1	94	66.538	ENSDNOG00000010732	SYNJ1	70	73.345	Dasypus_novemcinctus
ENSXMAG00000017524	synj1	53	80.654	ENSDORG00000014735	-	100	80.654	Dipodomys_ordii
ENSXMAG00000017524	synj1	83	77.778	ENSETEG00000018674	SYNJ1	59	77.778	Echinops_telfairi
ENSXMAG00000017524	synj1	99	69.517	ENSEASG00005006287	SYNJ1	98	76.836	Equus_asinus_asinus
ENSXMAG00000017524	synj1	99	69.478	ENSECAG00000004829	SYNJ1	99	67.836	Equus_caballus
ENSXMAG00000017524	synj1	87	71.402	ENSEEUG00000005150	SYNJ1	72	67.201	Erinaceus_europaeus
ENSXMAG00000017524	synj1	100	76.294	ENSELUG00000009731	synj1	98	73.046	Esox_lucius
ENSXMAG00000017524	synj1	98	69.196	ENSFCAG00000012498	SYNJ1	92	70.188	Felis_catus
ENSXMAG00000017524	synj1	74	60.474	ENSFALG00000004680	SYNJ1	61	69.948	Ficedula_albicollis
ENSXMAG00000017524	synj1	100	66.667	ENSFDAG00000016818	SYNJ1	100	80.797	Fukomys_damarensis
ENSXMAG00000017524	synj1	100	90.267	ENSFHEG00000017689	synj1	99	85.137	Fundulus_heteroclitus
ENSXMAG00000017524	synj1	80	85.233	ENSGMOG00000014852	synj1	83	85.113	Gadus_morhua
ENSXMAG00000017524	synj1	94	69.704	ENSGALG00000034317	SYNJ1	85	64.189	Gallus_gallus
ENSXMAG00000017524	synj1	100	95.629	ENSGAFG00000019466	synj1	100	94.217	Gambusia_affinis
ENSXMAG00000017524	synj1	99	81.520	ENSGACG00000020575	synj1	99	83.384	Gasterosteus_aculeatus
ENSXMAG00000017524	synj1	97	70.214	ENSGAGG00000022523	SYNJ1	82	77.057	Gopherus_agassizii
ENSXMAG00000017524	synj1	100	68.336	ENSGGOG00000015945	SYNJ1	100	67.461	Gorilla_gorilla
ENSXMAG00000017524	synj1	100	89.715	ENSHBUG00000007774	synj1	100	88.814	Haplochromis_burtoni
ENSXMAG00000017524	synj1	100	68.694	ENSHGLG00000006420	SYNJ1	100	80.512	Heterocephalus_glaber_female
ENSXMAG00000017524	synj1	99	68.601	ENSHGLG00100012591	SYNJ1	100	80.512	Heterocephalus_glaber_male
ENSXMAG00000017524	synj1	95	93.387	ENSHCOG00000012774	synj1	96	93.387	Hippocampus_comes
ENSXMAG00000017524	synj1	98	82.990	ENSIPUG00000010691	SYNJ1	86	79.283	Ictalurus_punctatus
ENSXMAG00000017524	synj1	100	67.055	ENSSTOG00000015806	SYNJ1	92	69.225	Ictidomys_tridecemlineatus
ENSXMAG00000017524	synj1	97	62.885	ENSJJAG00000020168	Synj1	84	59.603	Jaculus_jaculus
ENSXMAG00000017524	synj1	100	77.281	ENSKMAG00000004221	synj1	93	86.673	Kryptolebias_marmoratus
ENSXMAG00000017524	synj1	100	85.227	ENSLBEG00000015081	synj1	98	84.494	Labrus_bergylta
ENSXMAG00000017524	synj1	99	67.820	ENSLACG00000005928	SYNJ1	70	75.566	Latimeria_chalumnae
ENSXMAG00000017524	synj1	97	72.971	ENSLOCG00000009230	synj1	74	82.146	Lepisosteus_oculatus
ENSXMAG00000017524	synj1	96	67.500	ENSLAFG00000011806	SYNJ1	69	76.117	Loxodonta_africana
ENSXMAG00000017524	synj1	98	66.892	ENSMFAG00000018883	SYNJ1	92	67.845	Macaca_fascicularis
ENSXMAG00000017524	synj1	100	67.199	ENSMMUG00000004624	SYNJ1	92	68.855	Macaca_mulatta
ENSXMAG00000017524	synj1	100	67.418	ENSMNEG00000040077	SYNJ1	94	64.435	Macaca_nemestrina
ENSXMAG00000017524	synj1	100	67.991	ENSMLEG00000037029	SYNJ1	96	64.363	Mandrillus_leucophaeus
ENSXMAG00000017524	synj1	100	89.478	ENSMAMG00000013404	synj1	99	82.791	Mastacembelus_armatus
ENSXMAG00000017524	synj1	100	88.597	ENSMZEG00005024358	synj1	100	87.416	Maylandia_zebra
ENSXMAG00000017524	synj1	94	67.004	ENSMGAG00000014522	SYNJ1	86	61.130	Meleagris_gallopavo
ENSXMAG00000017524	synj1	100	69.345	ENSMAUG00000009743	Synj1	100	80.512	Mesocricetus_auratus
ENSXMAG00000017524	synj1	100	69.681	ENSMICG00000034953	SYNJ1	100	67.411	Microcebus_murinus
ENSXMAG00000017524	synj1	99	82.740	ENSMMOG00000010203	synj1	98	83.792	Mola_mola
ENSXMAG00000017524	synj1	93	64.590	ENSMODG00000021073	SYNJ1	83	71.793	Monodelphis_domestica
ENSXMAG00000017524	synj1	100	87.897	ENSMALG00000014015	synj1	99	82.549	Monopterus_albus
ENSXMAG00000017524	synj1	100	67.130	MGP_CAROLIEiJ_G0020951	Synj1	100	80.797	Mus_caroli
ENSXMAG00000017524	synj1	97	68.223	ENSMUSG00000022973	Synj1	100	80.797	Mus_musculus
ENSXMAG00000017524	synj1	97	70.724	MGP_PahariEiJ_G0016656	Synj1	100	80.797	Mus_pahari
ENSXMAG00000017524	synj1	97	68.223	MGP_SPRETEiJ_G0021857	Synj1	100	80.939	Mus_spretus
ENSXMAG00000017524	synj1	99	66.306	ENSMPUG00000001153	SYNJ1	85	63.132	Mustela_putorius_furo
ENSXMAG00000017524	synj1	62	61.013	ENSMLUG00000005764	-	54	71.918	Myotis_lucifugus
ENSXMAG00000017524	synj1	51	80.207	ENSMLUG00000026584	-	100	80.207	Myotis_lucifugus
ENSXMAG00000017524	synj1	98	69.447	ENSNGAG00000000453	Synj1	100	80.797	Nannospalax_galili
ENSXMAG00000017524	synj1	100	83.572	ENSNBRG00000011936	synj1	99	80.744	Neolamprologus_brichardi
ENSXMAG00000017524	synj1	86	65.047	ENSNLEG00000003734	SYNJ1	90	69.164	Nomascus_leucogenys
ENSXMAG00000017524	synj1	73	65.105	ENSMEUG00000004158	-	72	61.006	Notamacropus_eugenii
ENSXMAG00000017524	synj1	85	77.737	ENSOPRG00000013602	SYNJ1	75	77.737	Ochotona_princeps
ENSXMAG00000017524	synj1	53	81.081	ENSODEG00000002409	-	100	81.081	Octodon_degus
ENSXMAG00000017524	synj1	99	83.950	ENSONIG00000004667	synj1	96	79.958	Oreochromis_niloticus
ENSXMAG00000017524	synj1	94	66.305	ENSOANG00000006929	SYNJ1	76	68.246	Ornithorhynchus_anatinus
ENSXMAG00000017524	synj1	98	66.442	ENSOCUG00000001420	SYNJ1	82	65.011	Oryctolagus_cuniculus
ENSXMAG00000017524	synj1	100	88.789	ENSORLG00000004320	synj1	100	88.337	Oryzias_latipes
ENSXMAG00000017524	synj1	99	84.766	ENSORLG00020011994	synj1	97	83.182	Oryzias_latipes_hni
ENSXMAG00000017524	synj1	99	79.880	ENSORLG00015018077	synj1	96	79.615	Oryzias_latipes_hsok
ENSXMAG00000017524	synj1	100	85.833	ENSOMEG00000014322	synj1	99	85.075	Oryzias_melastigma
ENSXMAG00000017524	synj1	96	65.437	ENSOGAG00000006010	SYNJ1	75	66.237	Otolemur_garnettii
ENSXMAG00000017524	synj1	94	68.490	ENSOARG00000013414	SYNJ1	68	75.543	Ovis_aries
ENSXMAG00000017524	synj1	100	68.584	ENSPPAG00000026784	SYNJ1	84	76.433	Pan_paniscus
ENSXMAG00000017524	synj1	98	69.552	ENSPPRG00000023469	SYNJ1	92	70.188	Panthera_pardus
ENSXMAG00000017524	synj1	98	69.628	ENSPTIG00000007930	SYNJ1	92	70.270	Panthera_tigris_altaica
ENSXMAG00000017524	synj1	100	68.584	ENSPTRG00000023787	SYNJ1	100	67.461	Pan_troglodytes
ENSXMAG00000017524	synj1	100	68.358	ENSPTRG00000048135	-	100	67.461	Pan_troglodytes
ENSXMAG00000017524	synj1	100	68.065	ENSPANG00000022531	SYNJ1	92	69.101	Papio_anubis
ENSXMAG00000017524	synj1	86	82.220	ENSPKIG00000022603	synj1	95	81.749	Paramormyrops_kingsleyae
ENSXMAG00000017524	synj1	99	85.778	ENSPMGG00000016831	synj1	98	85.981	Periophthalmus_magnuspinnatus
ENSXMAG00000017524	synj1	100	66.836	ENSPEMG00000018767	Synj1	100	81.081	Peromyscus_maniculatus_bairdii
ENSXMAG00000017524	synj1	78	59.095	ENSPMAG00000002887	synj1	80	56.779	Petromyzon_marinus
ENSXMAG00000017524	synj1	97	67.838	ENSPCIG00000016372	SYNJ1	82	75.092	Phascolarctos_cinereus
ENSXMAG00000017524	synj1	100	95.737	ENSPFOG00000016886	synj1	100	96.203	Poecilia_formosa
ENSXMAG00000017524	synj1	100	95.961	ENSPLAG00000017559	synj1	99	97.535	Poecilia_latipinna
ENSXMAG00000017524	synj1	99	96.351	ENSPMEG00000007643	synj1	100	94.196	Poecilia_mexicana
ENSXMAG00000017524	synj1	100	97.806	ENSPREG00000012412	synj1	100	97.806	Poecilia_reticulata
ENSXMAG00000017524	synj1	99	66.936	ENSPPYG00000011365	SYNJ1	78	76.160	Pongo_abelii
ENSXMAG00000017524	synj1	79	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSXMAG00000017524	synj1	92	76.179	ENSPCOG00000024841	SYNJ1	86	76.179	Propithecus_coquereli
ENSXMAG00000017524	synj1	90	66.747	ENSPVAG00000000892	SYNJ1	82	63.670	Pteropus_vampyrus
ENSXMAG00000017524	synj1	100	86.953	ENSPNYG00000022989	synj1	100	85.768	Pundamilia_nyererei
ENSXMAG00000017524	synj1	83	88.626	ENSPNAG00000021119	synj1	91	88.647	Pygocentrus_nattereri
ENSXMAG00000017524	synj1	100	68.635	ENSRNOG00000002051	Synj1	100	67.110	Rattus_norvegicus
ENSXMAG00000017524	synj1	100	68.363	ENSRBIG00000034477	SYNJ1	84	76.251	Rhinopithecus_bieti
ENSXMAG00000017524	synj1	100	68.437	ENSRROG00000039256	SYNJ1	84	76.342	Rhinopithecus_roxellana
ENSXMAG00000017524	synj1	100	67.944	ENSSBOG00000021001	SYNJ1	92	72.910	Saimiri_boliviensis_boliviensis
ENSXMAG00000017524	synj1	99	65.975	ENSSHAG00000008538	SYNJ1	76	69.444	Sarcophilus_harrisii
ENSXMAG00000017524	synj1	100	81.879	ENSSFOG00015006095	synj1	97	71.869	Scleropages_formosus
ENSXMAG00000017524	synj1	99	87.296	ENSSMAG00000018066	synj1	97	86.057	Scophthalmus_maximus
ENSXMAG00000017524	synj1	100	86.497	ENSSDUG00000013058	synj1	99	82.580	Seriola_dumerili
ENSXMAG00000017524	synj1	100	88.612	ENSSLDG00000021406	synj1	100	88.914	Seriola_lalandi_dorsalis
ENSXMAG00000017524	synj1	95	69.929	ENSSPUG00000012552	SYNJ1	81	66.842	Sphenodon_punctatus
ENSXMAG00000017524	synj1	95	87.452	ENSSPAG00000006812	SYNJ1	99	82.083	Stegastes_partitus
ENSXMAG00000017524	synj1	99	88.708	ENSSPAG00000017029	synj1	98	87.509	Stegastes_partitus
ENSXMAG00000017524	synj1	100	68.769	ENSSSCG00000012035	SYNJ1	99	67.342	Sus_scrofa
ENSXMAG00000017524	synj1	100	67.976	ENSTGUG00000013445	SYNJ1	70	75.385	Taeniopygia_guttata
ENSXMAG00000017524	synj1	100	84.318	ENSTRUG00000006907	synj1	96	82.209	Takifugu_rubripes
ENSXMAG00000017524	synj1	99	78.708	ENSTNIG00000009940	synj1	97	79.217	Tetraodon_nigroviridis
ENSXMAG00000017524	synj1	86	80.519	ENSTBEG00000016298	SYNJ1	61	83.544	Tupaia_belangeri
ENSXMAG00000017524	synj1	99	61.516	ENSTTRG00000002222	SYNJ1	85	57.925	Tursiops_truncatus
ENSXMAG00000017524	synj1	99	68.093	ENSUAMG00000018606	SYNJ1	99	78.180	Ursus_americanus
ENSXMAG00000017524	synj1	96	72.587	ENSUMAG00000018419	SYNJ1	99	78.370	Ursus_maritimus
ENSXMAG00000017524	synj1	87	81.429	ENSVPAG00000001241	SYNJ1	59	81.429	Vicugna_pacos
ENSXMAG00000017524	synj1	100	67.201	ENSVVUG00000023125	SYNJ1	92	69.119	Vulpes_vulpes
ENSXMAG00000017524	synj1	100	66.544	ENSXETG00000009899	synj1	84	65.058	Xenopus_tropicalis
ENSXMAG00000017524	synj1	99	97.017	ENSXCOG00000011896	synj1	99	97.017	Xiphophorus_couchianus