EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017538 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3714 bases
Position: chr23:25112072-25115785
Accession: 102228228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017569	RNA_pol_L_2	PF13656.6	5.6e-30	1	1
ENSXMAP00000017569	RNA_pol_L	PF01193.24	8.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017594	-	393	XM_005810932	ENSXMAP00000017569	130 (aa)	XP_005810989	M4ASX4

Gene Model

Click here to download ENSXMAG00000017538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017538	polr1d	75	75.510	ENSG00000186184	POLR1D	84	75.510	Homo_sapiens
ENSXMAG00000017538	polr1d	77	89.000	ENSAPOG00000021882	polr1d	94	89.000	Acanthochromis_polyacanthus
ENSXMAG00000017538	polr1d	75	75.510	ENSAMEG00000019095	POLR1D	78	75.510	Ailuropoda_melanoleuca
ENSXMAG00000017538	polr1d	77	89.000	ENSACIG00000013328	polr1d	87	89.000	Amphilophus_citrinellus
ENSXMAG00000017538	polr1d	80	85.577	ENSAOCG00000018500	polr1d	91	85.577	Amphiprion_ocellaris
ENSXMAG00000017538	polr1d	77	89.000	ENSAPEG00000009489	polr1d	91	85.577	Amphiprion_percula
ENSXMAG00000017538	polr1d	77	87.000	ENSATEG00000019322	polr1d	89	87.000	Anabas_testudineus
ENSXMAG00000017538	polr1d	75	71.134	ENSACAG00000015753	POLR1D	84	71.134	Anolis_carolinensis
ENSXMAG00000017538	polr1d	75	75.510	ENSANAG00000024486	POLR1D	74	75.510	Aotus_nancymaae
ENSXMAG00000017538	polr1d	77	91.000	ENSACLG00000023805	polr1d	88	91.000	Astatotilapia_calliptera
ENSXMAG00000017538	polr1d	77	78.000	ENSAMXG00000036118	polr1d	87	78.000	Astyanax_mexicanus
ENSXMAG00000017538	polr1d	75	75.510	ENSBTAG00000033252	-	74	75.510	Bos_taurus
ENSXMAG00000017538	polr1d	75	75.510	ENSBTAG00000008642	POLR1D	74	75.510	Bos_taurus
ENSXMAG00000017538	polr1d	62	40.000	WBGene00010230	rpac-19	56	40.000	Caenorhabditis_elegans
ENSXMAG00000017538	polr1d	75	75.510	ENSCJAG00000044669	POLR1D	74	75.510	Callithrix_jacchus
ENSXMAG00000017538	polr1d	75	75.510	ENSCAFG00000006755	POLR1D	74	75.510	Canis_familiaris
ENSXMAG00000017538	polr1d	75	74.490	ENSCHIG00000021910	POLR1D	74	74.490	Capra_hircus
ENSXMAG00000017538	polr1d	75	76.289	ENSTSYG00000026817	-	73	76.289	Carlito_syrichta
ENSXMAG00000017538	polr1d	75	65.657	ENSTSYG00000034852	-	82	65.657	Carlito_syrichta
ENSXMAG00000017538	polr1d	75	58.163	ENSCCAG00000020191	-	71	58.163	Cebus_capucinus
ENSXMAG00000017538	polr1d	75	76.531	ENSCCAG00000021349	-	74	76.531	Cebus_capucinus
ENSXMAG00000017538	polr1d	75	64.948	ENSCATG00000022900	-	71	64.948	Cercocebus_atys
ENSXMAG00000017538	polr1d	75	75.510	ENSCATG00000030710	-	74	75.510	Cercocebus_atys
ENSXMAG00000017538	polr1d	75	74.490	ENSCLAG00000017623	POLR1D	79	74.490	Chinchilla_lanigera
ENSXMAG00000017538	polr1d	78	79.208	ENSCPBG00000004719	POLR1D	100	79.208	Chrysemys_picta_bellii
ENSXMAG00000017538	polr1d	75	75.258	ENSCANG00000037694	-	73	75.258	Colobus_angolensis_palliatus
ENSXMAG00000017538	polr1d	75	75.510	ENSCANG00000028632	-	74	75.510	Colobus_angolensis_palliatus
ENSXMAG00000017538	polr1d	75	75.510	ENSCGRG00001021251	Polr1d	74	75.510	Cricetulus_griseus_chok1gshd
ENSXMAG00000017538	polr1d	75	75.510	ENSCGRG00000011639	Polr1d	74	75.510	Cricetulus_griseus_crigri
ENSXMAG00000017538	polr1d	78	85.149	ENSCSEG00000018268	polr1d	86	85.149	Cynoglossus_semilaevis
ENSXMAG00000017538	polr1d	78	92.079	ENSCVAG00000018527	polr1d	89	92.079	Cyprinodon_variegatus
ENSXMAG00000017538	polr1d	73	74.737	ENSDARG00000037570	polr1d	85	74.737	Danio_rerio
ENSXMAG00000017538	polr1d	75	73.469	ENSDNOG00000046247	-	73	73.469	Dasypus_novemcinctus
ENSXMAG00000017538	polr1d	75	74.490	ENSDNOG00000043676	-	74	74.490	Dasypus_novemcinctus
ENSXMAG00000017538	polr1d	75	75.510	ENSDORG00000029155	Polr1d	74	75.510	Dipodomys_ordii
ENSXMAG00000017538	polr1d	71	44.565	FBgn0086447	l(2)37Cg	87	44.565	Drosophila_melanogaster
ENSXMAG00000017538	polr1d	75	74.490	ENSETEG00000012797	POLR1D	79	74.490	Echinops_telfairi
ENSXMAG00000017538	polr1d	72	63.441	ENSEBUG00000011748	polr1d	65	63.441	Eptatretus_burgeri
ENSXMAG00000017538	polr1d	75	75.510	ENSEASG00005022487	POLR1D	76	75.510	Equus_asinus_asinus
ENSXMAG00000017538	polr1d	75	75.510	ENSEEUG00000013144	POLR1D	79	75.510	Erinaceus_europaeus
ENSXMAG00000017538	polr1d	76	82.000	ENSELUG00000005105	rpac2	88	82.000	Esox_lucius
ENSXMAG00000017538	polr1d	75	75.510	ENSFCAG00000030162	POLR1D	74	75.510	Felis_catus
ENSXMAG00000017538	polr1d	66	82.558	ENSFALG00000011463	POLR1D	85	82.558	Ficedula_albicollis
ENSXMAG00000017538	polr1d	75	73.469	ENSFDAG00000004463	POLR1D	74	73.469	Fukomys_damarensis
ENSXMAG00000017538	polr1d	78	91.089	ENSFHEG00000015410	polr1d	88	91.089	Fundulus_heteroclitus
ENSXMAG00000017538	polr1d	78	96.040	ENSGAFG00000001693	polr1d	89	96.040	Gambusia_affinis
ENSXMAG00000017538	polr1d	78	87.129	ENSGACG00000018585	polr1d	86	87.129	Gasterosteus_aculeatus
ENSXMAG00000017538	polr1d	76	83.838	ENSGAGG00000008503	POLR1D	87	83.838	Gopherus_agassizii
ENSXMAG00000017538	polr1d	75	75.510	ENSGGOG00000004235	POLR1D	74	75.510	Gorilla_gorilla
ENSXMAG00000017538	polr1d	97	74.016	ENSHBUG00000002111	polr1d	89	89.109	Haplochromis_burtoni
ENSXMAG00000017538	polr1d	75	73.469	ENSHGLG00000003202	POLR1D	74	73.469	Heterocephalus_glaber_female
ENSXMAG00000017538	polr1d	75	73.469	ENSHGLG00100009393	POLR1D	74	73.469	Heterocephalus_glaber_male
ENSXMAG00000017538	polr1d	77	83.000	ENSHCOG00000003258	polr1d	88	83.000	Hippocampus_comes
ENSXMAG00000017538	polr1d	78	83.333	ENSIPUG00000014810	polr1d	89	83.333	Ictalurus_punctatus
ENSXMAG00000017538	polr1d	75	75.510	ENSSTOG00000013877	POLR1D	74	75.510	Ictidomys_tridecemlineatus
ENSXMAG00000017538	polr1d	75	73.469	ENSJJAG00000022671	-	82	73.469	Jaculus_jaculus
ENSXMAG00000017538	polr1d	72	59.574	ENSJJAG00000021667	-	54	59.574	Jaculus_jaculus
ENSXMAG00000017538	polr1d	78	87.129	ENSKMAG00000015256	polr1d	89	87.129	Kryptolebias_marmoratus
ENSXMAG00000017538	polr1d	78	87.129	ENSLBEG00000015919	polr1d	89	87.129	Labrus_bergylta
ENSXMAG00000017538	polr1d	74	72.165	ENSLACG00000006810	POLR1D	81	72.165	Latimeria_chalumnae
ENSXMAG00000017538	polr1d	55	85.915	ENSLOCG00000014976	polr1d	96	85.915	Lepisosteus_oculatus
ENSXMAG00000017538	polr1d	75	75.510	ENSLAFG00000032290	POLR1D	74	75.510	Loxodonta_africana
ENSXMAG00000017538	polr1d	75	75.510	ENSMFAG00000045264	POLR1D	76	75.510	Macaca_fascicularis
ENSXMAG00000017538	polr1d	75	75.510	ENSMMUG00000020386	POLR1D	84	75.510	Macaca_mulatta
ENSXMAG00000017538	polr1d	55	73.611	ENSMMUG00000041570	-	65	73.611	Macaca_mulatta
ENSXMAG00000017538	polr1d	75	60.825	ENSMNEG00000038120	-	70	60.825	Macaca_nemestrina
ENSXMAG00000017538	polr1d	75	75.510	ENSMNEG00000008630	-	74	75.510	Macaca_nemestrina
ENSXMAG00000017538	polr1d	75	67.010	ENSMLEG00000032251	-	71	67.010	Mandrillus_leucophaeus
ENSXMAG00000017538	polr1d	75	75.510	ENSMLEG00000041048	-	74	75.510	Mandrillus_leucophaeus
ENSXMAG00000017538	polr1d	77	89.000	ENSMAMG00000014834	polr1d	93	89.000	Mastacembelus_armatus
ENSXMAG00000017538	polr1d	77	91.000	ENSMZEG00005006638	polr1d	88	91.000	Maylandia_zebra
ENSXMAG00000017538	polr1d	70	80.220	ENSMGAG00000005322	POLR1D	83	80.220	Meleagris_gallopavo
ENSXMAG00000017538	polr1d	75	75.510	ENSMAUG00000001946	Polr1d	74	75.510	Mesocricetus_auratus
ENSXMAG00000017538	polr1d	75	74.490	ENSMICG00000016883	-	74	74.490	Microcebus_murinus
ENSXMAG00000017538	polr1d	75	58.163	ENSMICG00000007349	-	73	58.163	Microcebus_murinus
ENSXMAG00000017538	polr1d	75	74.490	ENSMOCG00000021288	Polr1d	74	74.490	Microtus_ochrogaster
ENSXMAG00000017538	polr1d	78	91.089	ENSMMOG00000009605	polr1d	89	91.089	Mola_mola
ENSXMAG00000017538	polr1d	77	81.000	ENSMODG00000023881	POLR1D	88	81.000	Monodelphis_domestica
ENSXMAG00000017538	polr1d	78	86.139	ENSMALG00000010652	polr1d	89	86.139	Monopterus_albus
ENSXMAG00000017538	polr1d	75	73.469	MGP_CAROLIEiJ_G0028034	Polr1d	74	73.469	Mus_caroli
ENSXMAG00000017538	polr1d	75	73.469	ENSMUSG00000029642	Polr1d	74	73.469	Mus_musculus
ENSXMAG00000017538	polr1d	75	73.469	MGP_PahariEiJ_G0024600	Polr1d	74	73.469	Mus_pahari
ENSXMAG00000017538	polr1d	75	73.469	MGP_SPRETEiJ_G0029032	Polr1d	74	73.469	Mus_spretus
ENSXMAG00000017538	polr1d	75	70.103	ENSMLUG00000004118	-	73	70.103	Myotis_lucifugus
ENSXMAG00000017538	polr1d	75	76.289	ENSMLUG00000027169	-	73	76.289	Myotis_lucifugus
ENSXMAG00000017538	polr1d	75	75.510	ENSNGAG00000006014	Polr1d	84	75.510	Nannospalax_galili
ENSXMAG00000017538	polr1d	78	89.109	ENSNBRG00000020327	polr1d	89	89.109	Neolamprologus_brichardi
ENSXMAG00000017538	polr1d	75	75.510	ENSNLEG00000000358	POLR1D	74	75.510	Nomascus_leucogenys
ENSXMAG00000017538	polr1d	75	74.490	ENSODEG00000005294	-	74	74.490	Octodon_degus
ENSXMAG00000017538	polr1d	75	62.245	ENSODEG00000014801	-	71	62.245	Octodon_degus
ENSXMAG00000017538	polr1d	77	81.000	ENSOANG00000008708	-	93	81.000	Ornithorhynchus_anatinus
ENSXMAG00000017538	polr1d	75	75.510	ENSOCUG00000015706	POLR1D	60	75.510	Oryctolagus_cuniculus
ENSXMAG00000017538	polr1d	85	82.727	ENSORLG00000010257	polr1d	89	86.139	Oryzias_latipes
ENSXMAG00000017538	polr1d	83	82.883	ENSORLG00020000533	polr1d	68	86.139	Oryzias_latipes_hni
ENSXMAG00000017538	polr1d	87	81.034	ENSORLG00015013267	polr1d	67	87.129	Oryzias_latipes_hsok
ENSXMAG00000017538	polr1d	78	87.129	ENSOMEG00000014912	polr1d	67	87.129	Oryzias_melastigma
ENSXMAG00000017538	polr1d	75	76.531	ENSOGAG00000014601	POLR1D	74	76.531	Otolemur_garnettii
ENSXMAG00000017538	polr1d	75	74.490	ENSOARG00000017005	POLR1D	75	74.490	Ovis_aries
ENSXMAG00000017538	polr1d	75	75.510	ENSPPAG00000028138	POLR1D	74	75.510	Pan_paniscus
ENSXMAG00000017538	polr1d	75	75.510	ENSPPRG00000003381	POLR1D	74	75.510	Panthera_pardus
ENSXMAG00000017538	polr1d	75	75.510	ENSPTIG00000018137	POLR1D	74	75.510	Panthera_tigris_altaica
ENSXMAG00000017538	polr1d	75	75.510	ENSPTRG00000005734	POLR1D	74	75.510	Pan_troglodytes
ENSXMAG00000017538	polr1d	75	75.510	ENSPANG00000020259	-	74	75.510	Papio_anubis
ENSXMAG00000017538	polr1d	75	65.979	ENSPANG00000035051	-	71	65.979	Papio_anubis
ENSXMAG00000017538	polr1d	68	81.818	ENSPKIG00000021891	polr1d	90	61.404	Paramormyrops_kingsleyae
ENSXMAG00000017538	polr1d	77	78.000	ENSPSIG00000011822	POLR1D	78	78.000	Pelodiscus_sinensis
ENSXMAG00000017538	polr1d	78	75.248	ENSPMGG00000012998	POLR1D	73	75.248	Periophthalmus_magnuspinnatus
ENSXMAG00000017538	polr1d	78	85.149	ENSPMGG00000010359	polr1d	88	85.149	Periophthalmus_magnuspinnatus
ENSXMAG00000017538	polr1d	75	74.490	ENSPEMG00000006336	-	75	74.490	Peromyscus_maniculatus_bairdii
ENSXMAG00000017538	polr1d	75	61.224	ENSPMAG00000004228	polr1d	81	61.224	Petromyzon_marinus
ENSXMAG00000017538	polr1d	77	81.000	ENSPCIG00000001673	POLR1D	88	81.000	Phascolarctos_cinereus
ENSXMAG00000017538	polr1d	78	97.030	ENSPFOG00000023343	polr1d	89	97.030	Poecilia_formosa
ENSXMAG00000017538	polr1d	78	97.030	ENSPLAG00000009675	polr1d	89	97.030	Poecilia_latipinna
ENSXMAG00000017538	polr1d	78	97.030	ENSPMEG00000004628	polr1d	89	97.030	Poecilia_mexicana
ENSXMAG00000017538	polr1d	78	97.030	ENSPREG00000022032	polr1d	89	97.030	Poecilia_reticulata
ENSXMAG00000017538	polr1d	75	73.469	ENSPCOG00000028175	POLR1D	74	73.469	Propithecus_coquereli
ENSXMAG00000017538	polr1d	78	89.109	ENSPNYG00000000107	polr1d	89	89.109	Pundamilia_nyererei
ENSXMAG00000017538	polr1d	74	77.083	ENSPNAG00000001512	polr1d	89	73.585	Pygocentrus_nattereri
ENSXMAG00000017538	polr1d	75	73.196	ENSRBIG00000000336	-	73	73.196	Rhinopithecus_bieti
ENSXMAG00000017538	polr1d	75	75.510	ENSRBIG00000036378	-	74	75.510	Rhinopithecus_bieti
ENSXMAG00000017538	polr1d	75	74.227	ENSRROG00000026751	-	73	74.227	Rhinopithecus_roxellana
ENSXMAG00000017538	polr1d	75	75.510	ENSRROG00000042232	-	74	75.510	Rhinopithecus_roxellana
ENSXMAG00000017538	polr1d	66	54.651	YNL113W	RPC19	70	51.515	Saccharomyces_cerevisiae
ENSXMAG00000017538	polr1d	75	75.510	ENSSBOG00000028482	-	74	75.510	Saimiri_boliviensis_boliviensis
ENSXMAG00000017538	polr1d	78	68.627	ENSSBOG00000030146	-	75	68.627	Saimiri_boliviensis_boliviensis
ENSXMAG00000017538	polr1d	77	79.000	ENSSHAG00000001190	POLR1D	78	79.000	Sarcophilus_harrisii
ENSXMAG00000017538	polr1d	78	79.412	ENSSFOG00015011375	polr1d	89	79.412	Scleropages_formosus
ENSXMAG00000017538	polr1d	78	86.139	ENSSMAG00000011861	polr1d	89	86.139	Scophthalmus_maximus
ENSXMAG00000017538	polr1d	78	85.149	ENSSDUG00000011930	polr1d	89	85.149	Seriola_dumerili
ENSXMAG00000017538	polr1d	92	78.151	ENSSLDG00000023871	polr1d	99	78.151	Seriola_lalandi_dorsalis
ENSXMAG00000017538	polr1d	75	75.510	ENSSARG00000007840	POLR1D	74	75.510	Sorex_araneus
ENSXMAG00000017538	polr1d	70	78.022	ENSSPUG00000005786	POLR1D	83	74.227	Sphenodon_punctatus
ENSXMAG00000017538	polr1d	78	88.119	ENSSPAG00000011764	polr1d	89	88.119	Stegastes_partitus
ENSXMAG00000017538	polr1d	75	74.490	ENSSSCG00000009310	POLR1D	74	74.490	Sus_scrofa
ENSXMAG00000017538	polr1d	66	82.558	ENSTGUG00000005450	POLR1D	90	82.558	Taeniopygia_guttata
ENSXMAG00000017538	polr1d	78	83.168	ENSTRUG00000019741	polr1d	89	83.168	Takifugu_rubripes
ENSXMAG00000017538	polr1d	75	75.510	ENSTBEG00000007006	POLR1D	79	75.510	Tupaia_belangeri
ENSXMAG00000017538	polr1d	75	75.510	ENSUAMG00000011413	POLR1D	74	75.510	Ursus_americanus
ENSXMAG00000017538	polr1d	75	75.510	ENSUMAG00000016968	POLR1D	77	75.510	Ursus_maritimus
ENSXMAG00000017538	polr1d	75	75.510	ENSVVUG00000009216	POLR1D	74	75.510	Vulpes_vulpes
ENSXMAG00000017538	polr1d	100	96.923	ENSXCOG00000011731	polr1d	100	96.923	Xiphophorus_couchianus