EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017620 (Gene tree)
Gene ID: 102237555
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: pre-mRNA 3'-end-processing factor FIP1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9190 bases
Position: chr5:11333891-11343080
Accession: 102237555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017666	Fip1	PF05182.13	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017691	-	2343	XM_014472519	ENSXMAP00000017666	550 (aa)	XP_014328005	M4AT71

Gene Model

Click here to download ENSXMAG00000017620's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017620	fip1l1b	69	93.750	ENSACIG00000001454	fip1l1b	96	93.750	Amphilophus_citrinellus
ENSXMAG00000017620	fip1l1b	100	84.183	ENSAOCG00000021043	fip1l1b	100	84.183	Amphiprion_ocellaris
ENSXMAG00000017620	fip1l1b	100	84.183	ENSAPEG00000022229	fip1l1b	100	84.183	Amphiprion_percula
ENSXMAG00000017620	fip1l1b	100	87.659	ENSATEG00000021757	fip1l1b	100	87.659	Anabas_testudineus
ENSXMAG00000017620	fip1l1b	83	55.703	ENSAPLG00000003042	-	90	56.008	Anas_platyrhynchos
ENSXMAG00000017620	fip1l1b	57	50.204	ENSAPLG00000008548	-	99	39.854	Anas_platyrhynchos
ENSXMAG00000017620	fip1l1b	69	69.281	ENSACAG00000010556	-	89	55.805	Anolis_carolinensis
ENSXMAG00000017620	fip1l1b	100	89.455	ENSACLG00000010418	fip1l1b	100	89.455	Astatotilapia_calliptera
ENSXMAG00000017620	fip1l1b	59	44.136	ENSAMXG00000031045	fip1l1a	54	51.042	Astyanax_mexicanus
ENSXMAG00000017620	fip1l1b	56	68.098	ENSAMXG00000011126	fip1l1b	89	70.103	Astyanax_mexicanus
ENSXMAG00000017620	fip1l1b	83	62.017	ENSBTAG00000020653	FIP1L1	99	60.250	Bos_taurus
ENSXMAG00000017620	fip1l1b	83	59.100	ENSCHIG00000025903	-	99	58.603	Capra_hircus
ENSXMAG00000017620	fip1l1b	83	55.269	ENSCAPG00000009569	-	77	53.444	Cavia_aperea
ENSXMAG00000017620	fip1l1b	83	62.151	ENSCPOG00000010770	-	85	66.812	Cavia_porcellus
ENSXMAG00000017620	fip1l1b	99	61.943	ENSCPBG00000025019	-	99	59.965	Chrysemys_picta_bellii
ENSXMAG00000017620	fip1l1b	50	52.837	ENSCPBG00000014849	-	97	43.902	Chrysemys_picta_bellii
ENSXMAG00000017620	fip1l1b	99	56.106	ENSCGRG00001018568	Fip1l1	99	59.964	Cricetulus_griseus_chok1gshd
ENSXMAG00000017620	fip1l1b	99	56.106	ENSCGRG00000000208	Fip1l1	99	59.964	Cricetulus_griseus_crigri
ENSXMAG00000017620	fip1l1b	100	85.870	ENSCSEG00000006583	fip1l1b	100	85.870	Cynoglossus_semilaevis
ENSXMAG00000017620	fip1l1b	100	91.652	ENSCVAG00000023435	fip1l1b	100	91.470	Cyprinodon_variegatus
ENSXMAG00000017620	fip1l1b	100	67.238	ENSDARG00000070431	fip1l1b	100	67.753	Danio_rerio
ENSXMAG00000017620	fip1l1b	87	39.394	ENSDARG00000043328	fip1l1a	100	41.608	Danio_rerio
ENSXMAG00000017620	fip1l1b	80	50.000	ENSETEG00000018271	-	89	54.092	Echinops_telfairi
ENSXMAG00000017620	fip1l1b	83	56.967	ENSEASG00005019566	-	99	58.007	Equus_asinus_asinus
ENSXMAG00000017620	fip1l1b	52	55.942	ENSEEUG00000004965	-	59	56.851	Erinaceus_europaeus
ENSXMAG00000017620	fip1l1b	99	51.254	ENSELUG00000004607	fip1l1a	99	55.080	Esox_lucius
ENSXMAG00000017620	fip1l1b	100	93.829	ENSFHEG00000003843	fip1l1b	100	93.466	Fundulus_heteroclitus
ENSXMAG00000017620	fip1l1b	60	33.791	ENSGMOG00000012065	-	52	39.720	Gadus_morhua
ENSXMAG00000017620	fip1l1b	100	67.814	ENSGMOG00000004913	fip1l1b	100	67.470	Gadus_morhua
ENSXMAG00000017620	fip1l1b	99	59.680	ENSGALG00000013943	-	99	60.036	Gallus_gallus
ENSXMAG00000017620	fip1l1b	100	97.645	ENSGAFG00000008253	fip1l1b	100	97.645	Gambusia_affinis
ENSXMAG00000017620	fip1l1b	100	70.297	ENSGACG00000015946	fip1l1b	100	70.050	Gasterosteus_aculeatus
ENSXMAG00000017620	fip1l1b	50	50.355	ENSGAGG00000017677	-	79	48.837	Gopherus_agassizii
ENSXMAG00000017620	fip1l1b	99	61.943	ENSGAGG00000009763	-	99	59.965	Gopherus_agassizii
ENSXMAG00000017620	fip1l1b	100	89.455	ENSHBUG00000013978	fip1l1b	100	89.455	Haplochromis_burtoni
ENSXMAG00000017620	fip1l1b	99	81.261	ENSHCOG00000015834	fip1l1b	99	83.243	Hippocampus_comes
ENSXMAG00000017620	fip1l1b	97	56.962	ENSIPUG00000022454	fip1l1b	100	66.667	Ictalurus_punctatus
ENSXMAG00000017620	fip1l1b	100	85.118	ENSKMAG00000021938	fip1l1b	100	84.936	Kryptolebias_marmoratus
ENSXMAG00000017620	fip1l1b	100	80.351	ENSLBEG00000028819	fip1l1b	100	81.930	Labrus_bergylta
ENSXMAG00000017620	fip1l1b	96	60.111	ENSLACG00000011991	fip1l1a	96	62.018	Latimeria_chalumnae
ENSXMAG00000017620	fip1l1b	99	63.203	ENSLOCG00000014127	fip1l1b	99	63.140	Lepisosteus_oculatus
ENSXMAG00000017620	fip1l1b	100	86.594	ENSMAMG00000004535	fip1l1b	100	86.594	Mastacembelus_armatus
ENSXMAG00000017620	fip1l1b	100	89.455	ENSMZEG00005023828	fip1l1b	100	89.455	Maylandia_zebra
ENSXMAG00000017620	fip1l1b	86	52.800	ENSMAUG00000010526	Fip1l1	99	56.890	Mesocricetus_auratus
ENSXMAG00000017620	fip1l1b	99	54.159	ENSMOCG00000008020	Fip1l1	99	58.333	Microtus_ochrogaster
ENSXMAG00000017620	fip1l1b	81	96.154	ENSMMOG00000008262	fip1l1b	92	96.154	Mola_mola
ENSXMAG00000017620	fip1l1b	58	56.873	ENSMODG00000020654	-	86	51.983	Monodelphis_domestica
ENSXMAG00000017620	fip1l1b	100	65.248	ENSMALG00000000838	fip1l1b	100	64.894	Monopterus_albus
ENSXMAG00000017620	fip1l1b	83	60.814	MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.358	Mus_caroli
ENSXMAG00000017620	fip1l1b	83	60.814	ENSMUSG00000029227	Fip1l1	99	59.358	Mus_musculus
ENSXMAG00000017620	fip1l1b	83	60.814	MGP_PahariEiJ_G0017085	Fip1l1	99	59.358	Mus_pahari
ENSXMAG00000017620	fip1l1b	83	60.814	MGP_SPRETEiJ_G0028299	Fip1l1	99	59.358	Mus_spretus
ENSXMAG00000017620	fip1l1b	83	61.935	ENSNGAG00000008849	Fip1l1	99	60.682	Nannospalax_galili
ENSXMAG00000017620	fip1l1b	100	86.620	ENSNBRG00000017832	fip1l1b	100	86.620	Neolamprologus_brichardi
ENSXMAG00000017620	fip1l1b	100	86.092	ENSONIG00000008785	fip1l1b	100	86.092	Oreochromis_niloticus
ENSXMAG00000017620	fip1l1b	83	52.273	ENSOANG00000003384	-	67	52.513	Ornithorhynchus_anatinus
ENSXMAG00000017620	fip1l1b	100	85.481	ENSORLG00000004397	fip1l1b	100	85.481	Oryzias_latipes
ENSXMAG00000017620	fip1l1b	100	85.299	ENSORLG00020008716	fip1l1b	100	84.936	Oryzias_latipes_hni
ENSXMAG00000017620	fip1l1b	100	85.299	ENSORLG00015006736	fip1l1b	100	85.299	Oryzias_latipes_hsok
ENSXMAG00000017620	fip1l1b	100	59.059	ENSOMEG00000015730	fip1l1b	100	57.877	Oryzias_melastigma
ENSXMAG00000017620	fip1l1b	100	60.984	ENSPKIG00000003396	fip1l1b	100	58.875	Paramormyrops_kingsleyae
ENSXMAG00000017620	fip1l1b	50	45.965	ENSPKIG00000014162	-	84	42.680	Paramormyrops_kingsleyae
ENSXMAG00000017620	fip1l1b	100	68.858	ENSPMGG00000017028	fip1l1b	100	68.284	Periophthalmus_magnuspinnatus
ENSXMAG00000017620	fip1l1b	99	56.206	ENSPEMG00000002025	Fip1l1	99	59.605	Peromyscus_maniculatus_bairdii
ENSXMAG00000017620	fip1l1b	51	56.688	ENSPCIG00000019318	-	97	57.097	Phascolarctos_cinereus
ENSXMAG00000017620	fip1l1b	100	96.915	ENSPFOG00000014745	fip1l1b	100	96.915	Poecilia_formosa
ENSXMAG00000017620	fip1l1b	100	97.101	ENSPLAG00000010954	fip1l1b	100	97.101	Poecilia_latipinna
ENSXMAG00000017620	fip1l1b	100	97.096	ENSPMEG00000019187	fip1l1b	100	97.096	Poecilia_mexicana
ENSXMAG00000017620	fip1l1b	84	75.488	ENSPREG00000012535	fip1l1b	93	75.488	Poecilia_reticulata
ENSXMAG00000017620	fip1l1b	66	85.602	ENSPNYG00000015976	fip1l1b	99	85.602	Pundamilia_nyererei
ENSXMAG00000017620	fip1l1b	57	68.389	ENSPNAG00000015341	fip1l1b	71	67.584	Pygocentrus_nattereri
ENSXMAG00000017620	fip1l1b	59	45.679	ENSPNAG00000009853	fip1l1a	59	53.081	Pygocentrus_nattereri
ENSXMAG00000017620	fip1l1b	51	44.295	ENSPNAG00000007456	-	86	36.078	Pygocentrus_nattereri
ENSXMAG00000017620	fip1l1b	83	58.672	ENSRNOG00000002275	Fip1l1	99	57.754	Rattus_norvegicus
ENSXMAG00000017620	fip1l1b	83	53.282	ENSSHAG00000015789	-	86	57.558	Sarcophilus_harrisii
ENSXMAG00000017620	fip1l1b	91	61.272	ENSSFOG00015017653	fip1l1b	95	56.513	Scleropages_formosus
ENSXMAG00000017620	fip1l1b	55	44.308	ENSSFOG00015010948	-	58	52.511	Scleropages_formosus
ENSXMAG00000017620	fip1l1b	100	86.051	ENSSMAG00000013444	fip1l1b	100	85.870	Scophthalmus_maximus
ENSXMAG00000017620	fip1l1b	100	88.566	ENSSDUG00000004117	fip1l1b	100	88.566	Seriola_dumerili
ENSXMAG00000017620	fip1l1b	100	88.022	ENSSLDG00000024099	fip1l1b	100	87.840	Seriola_lalandi_dorsalis
ENSXMAG00000017620	fip1l1b	69	55.422	ENSSARG00000001973	-	83	51.550	Sorex_araneus
ENSXMAG00000017620	fip1l1b	100	85.589	ENSSPAG00000017564	fip1l1b	100	85.589	Stegastes_partitus
ENSXMAG00000017620	fip1l1b	100	81.769	ENSTRUG00000001545	fip1l1b	100	82.130	Takifugu_rubripes
ENSXMAG00000017620	fip1l1b	100	73.884	ENSTNIG00000004104	fip1l1b	100	74.050	Tetraodon_nigroviridis
ENSXMAG00000017620	fip1l1b	69	56.573	ENSUMAG00000002758	-	90	61.297	Ursus_maritimus
ENSXMAG00000017620	fip1l1b	69	55.422	ENSVPAG00000011574	-	87	51.550	Vicugna_pacos
ENSXMAG00000017620	fip1l1b	99	57.496	ENSXETG00000011679	fip1l1	92	56.918	Xenopus_tropicalis
ENSXMAG00000017620	fip1l1b	100	73.514	ENSXCOG00000013656	fip1l1b	96	81.898	Xiphophorus_couchianus