EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017682 (Gene tree)
Gene ID: 102223040
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 18093 bases
Position: chr15:8367121-8385213
Accession: 102223040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	1	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	2	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	3	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	4	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	5	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	6	7
ENSXMAP00000017743	PUF	PF00806.19	3.1e-71	7	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	1	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	2	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	3	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	4	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	5	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	6	7
ENSXMAP00000033253	PUF	PF00806.19	1.5e-69	7	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	1	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	2	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	3	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	4	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	5	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	6	7
ENSXMAP00000021756	PUF	PF00806.19	1.5e-67	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036004	-	6112	XM_023348166	ENSXMAP00000021756	1211 (aa)	XP_023203934	UPI000293DF23
ENSXMAT00000040864	-	6040	XM_005803131	ENSXMAP00000033253	1187 (aa)	XP_005803188	UPI0003B64499
ENSXMAT00000017768	-	2958	-	ENSXMAP00000017743	985 (aa)	-	M4ATE8

Gene Model

Click here to download ENSXMAG00000017682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017682	pum2	94	77.331	ENSG00000055917	PUM2	96	91.463	Homo_sapiens
ENSXMAG00000017682	pum2	100	93.869	ENSAPOG00000015756	pum2	100	93.869	Acanthochromis_polyacanthus
ENSXMAG00000017682	pum2	100	81.837	ENSAMEG00000002823	PUM2	96	91.019	Ailuropoda_melanoleuca
ENSXMAG00000017682	pum2	90	99.371	ENSACIG00000010646	pum2	96	99.376	Amphilophus_citrinellus
ENSXMAG00000017682	pum2	98	95.005	ENSAOCG00000016619	pum2	99	95.005	Amphiprion_ocellaris
ENSXMAG00000017682	pum2	100	96.764	ENSAPEG00000019924	pum2	100	96.764	Amphiprion_percula
ENSXMAG00000017682	pum2	100	95.054	ENSATEG00000015030	pum2	100	94.889	Anabas_testudineus
ENSXMAG00000017682	pum2	100	72.291	ENSAPLG00000010496	PUM2	100	70.871	Anas_platyrhynchos
ENSXMAG00000017682	pum2	90	75.231	ENSACAG00000010491	PUM2	100	72.643	Anolis_carolinensis
ENSXMAG00000017682	pum2	100	82.180	ENSANAG00000021807	PUM2	96	91.463	Aotus_nancymaae
ENSXMAG00000017682	pum2	100	95.144	ENSACLG00000022532	pum2	100	95.309	Astatotilapia_calliptera
ENSXMAG00000017682	pum2	100	82.390	ENSBTAG00000011155	PUM2	96	91.707	Bos_taurus
ENSXMAG00000017682	pum2	100	82.180	ENSCJAG00000007450	PUM2	96	91.463	Callithrix_jacchus
ENSXMAG00000017682	pum2	100	82.180	ENSCAFG00000003839	PUM2	96	91.463	Canis_familiaris
ENSXMAG00000017682	pum2	100	81.837	ENSCAFG00020025689	PUM2	96	91.019	Canis_lupus_dingo
ENSXMAG00000017682	pum2	100	82.390	ENSCHIG00000022180	PUM2	96	91.707	Capra_hircus
ENSXMAG00000017682	pum2	100	82.773	ENSTSYG00000014463	PUM2	96	91.463	Carlito_syrichta
ENSXMAG00000017682	pum2	89	87.976	ENSCAPG00000016888	PUM2	99	85.443	Cavia_aperea
ENSXMAG00000017682	pum2	100	77.345	ENSCPOG00000031996	PUM2	96	91.463	Cavia_porcellus
ENSXMAG00000017682	pum2	100	82.180	ENSCCAG00000037035	PUM2	96	91.463	Cebus_capucinus
ENSXMAG00000017682	pum2	100	82.180	ENSCATG00000043826	PUM2	96	91.463	Cercocebus_atys
ENSXMAG00000017682	pum2	100	77.146	ENSCLAG00000006048	PUM2	91	91.463	Chinchilla_lanigera
ENSXMAG00000017682	pum2	100	82.180	ENSCSAG00000008087	PUM2	96	91.463	Chlorocebus_sabaeus
ENSXMAG00000017682	pum2	66	79.854	ENSCHOG00000004575	PUM2	79	76.852	Choloepus_hoffmanni
ENSXMAG00000017682	pum2	100	75.500	ENSCPBG00000019966	PUM2	100	74.100	Chrysemys_picta_bellii
ENSXMAG00000017682	pum2	100	82.180	ENSCANG00000032797	PUM2	96	91.463	Colobus_angolensis_palliatus
ENSXMAG00000017682	pum2	100	76.923	ENSCGRG00001025023	Pum2	96	91.463	Cricetulus_griseus_chok1gshd
ENSXMAG00000017682	pum2	100	76.923	ENSCGRG00000001580	Pum2	96	91.463	Cricetulus_griseus_crigri
ENSXMAG00000017682	pum2	100	92.498	ENSCSEG00000020899	pum2	100	92.663	Cynoglossus_semilaevis
ENSXMAG00000017682	pum2	100	96.790	ENSCVAG00000002426	pum2	100	96.790	Cyprinodon_variegatus
ENSXMAG00000017682	pum2	100	87.008	ENSDARG00000061040	pum2	100	86.169	Danio_rerio
ENSXMAG00000017682	pum2	96	73.030	ENSDNOG00000006733	PUM2	100	70.826	Dasypus_novemcinctus
ENSXMAG00000017682	pum2	97	81.211	ENSDORG00000011453	Pum2	90	90.534	Dipodomys_ordii
ENSXMAG00000017682	pum2	86	89.716	ENSETEG00000017683	PUM2	79	90.426	Echinops_telfairi
ENSXMAG00000017682	pum2	67	71.461	ENSEBUG00000014828	pum2	92	59.800	Eptatretus_burgeri
ENSXMAG00000017682	pum2	86	60.308	ENSEBUG00000004435	pum2	96	82.968	Eptatretus_burgeri
ENSXMAG00000017682	pum2	100	82.180	ENSEASG00005009429	PUM2	96	91.463	Equus_asinus_asinus
ENSXMAG00000017682	pum2	100	82.180	ENSECAG00000021930	PUM2	96	91.463	Equus_caballus
ENSXMAG00000017682	pum2	74	73.585	ENSEEUG00000003224	-	74	73.585	Erinaceus_europaeus
ENSXMAG00000017682	pum2	100	88.871	ENSELUG00000014997	pum2	100	88.725	Esox_lucius
ENSXMAG00000017682	pum2	100	81.971	ENSFCAG00000027520	PUM2	96	91.220	Felis_catus
ENSXMAG00000017682	pum2	100	81.971	ENSFALG00000001759	PUM2	96	91.220	Ficedula_albicollis
ENSXMAG00000017682	pum2	100	76.600	ENSFDAG00000019685	PUM2	96	90.976	Fukomys_damarensis
ENSXMAG00000017682	pum2	100	96.072	ENSFHEG00000021596	pum2	100	96.057	Fundulus_heteroclitus
ENSXMAG00000017682	pum2	90	86.216	ENSGMOG00000006903	pum2	100	86.494	Gadus_morhua
ENSXMAG00000017682	pum2	99	74.341	ENSGALG00000016481	PUM2	100	73.105	Gallus_gallus
ENSXMAG00000017682	pum2	100	99.188	ENSGAFG00000013691	pum2	100	99.188	Gambusia_affinis
ENSXMAG00000017682	pum2	90	91.527	ENSGACG00000009670	pum2	100	91.729	Gasterosteus_aculeatus
ENSXMAG00000017682	pum2	100	73.026	ENSGAGG00000020698	PUM2	100	73.407	Gopherus_agassizii
ENSXMAG00000017682	pum2	100	82.180	ENSGGOG00000011374	PUM2	96	91.463	Gorilla_gorilla
ENSXMAG00000017682	pum2	100	94.538	ENSHBUG00000016453	pum2	100	86.387	Haplochromis_burtoni
ENSXMAG00000017682	pum2	100	76.300	ENSHGLG00000007892	PUM2	100	74.900	Heterocephalus_glaber_female
ENSXMAG00000017682	pum2	100	69.010	ENSHGLG00100015510	PUM2	100	73.985	Heterocephalus_glaber_male
ENSXMAG00000017682	pum2	100	92.527	ENSHCOG00000010119	pum2	100	92.947	Hippocampus_comes
ENSXMAG00000017682	pum2	100	76.900	ENSSTOG00000006262	PUM2	96	91.463	Ictidomys_tridecemlineatus
ENSXMAG00000017682	pum2	100	81.837	ENSJJAG00000020969	Pum2	96	91.019	Jaculus_jaculus
ENSXMAG00000017682	pum2	100	93.992	ENSKMAG00000017216	pum2	100	94.486	Kryptolebias_marmoratus
ENSXMAG00000017682	pum2	99	99.029	ENSLBEG00000020488	pum2	100	94.559	Labrus_bergylta
ENSXMAG00000017682	pum2	100	74.020	ENSLACG00000008723	PUM2	100	72.549	Latimeria_chalumnae
ENSXMAG00000017682	pum2	100	76.327	ENSLOCG00000017196	pum2	100	74.960	Lepisosteus_oculatus
ENSXMAG00000017682	pum2	100	81.420	ENSLAFG00000009278	PUM2	91	90.534	Loxodonta_africana
ENSXMAG00000017682	pum2	100	82.180	ENSMFAG00000000492	PUM2	96	91.463	Macaca_fascicularis
ENSXMAG00000017682	pum2	100	82.180	ENSMMUG00000023181	PUM2	96	91.463	Macaca_mulatta
ENSXMAG00000017682	pum2	100	82.180	ENSMNEG00000039659	PUM2	96	91.463	Macaca_nemestrina
ENSXMAG00000017682	pum2	100	82.180	ENSMLEG00000039243	PUM2	96	91.463	Mandrillus_leucophaeus
ENSXMAG00000017682	pum2	100	94.234	ENSMAMG00000006121	pum2	100	94.481	Mastacembelus_armatus
ENSXMAG00000017682	pum2	100	95.144	ENSMZEG00005000791	pum2	100	95.309	Maylandia_zebra
ENSXMAG00000017682	pum2	100	68.709	ENSMGAG00000014040	PUM2	95	90.976	Meleagris_gallopavo
ENSXMAG00000017682	pum2	100	69.750	ENSMAUG00000000311	Pum2	96	91.019	Mesocricetus_auratus
ENSXMAG00000017682	pum2	94	77.378	ENSMICG00000011647	PUM2	96	91.463	Microcebus_murinus
ENSXMAG00000017682	pum2	100	69.537	ENSMOCG00000013663	Pum2	100	74.191	Microtus_ochrogaster
ENSXMAG00000017682	pum2	90	91.643	ENSMMOG00000002975	pum2	100	92.286	Mola_mola
ENSXMAG00000017682	pum2	100	78.645	ENSMODG00000009811	PUM2	100	87.621	Monodelphis_domestica
ENSXMAG00000017682	pum2	100	91.826	ENSMALG00000022313	pum2	100	91.625	Monopterus_albus
ENSXMAG00000017682	pum2	100	82.180	MGP_CAROLIEiJ_G0017603	Pum2	96	91.463	Mus_caroli
ENSXMAG00000017682	pum2	100	81.971	ENSMUSG00000020594	Pum2	96	91.220	Mus_musculus
ENSXMAG00000017682	pum2	100	77.332	MGP_PahariEiJ_G0029361	Pum2	96	91.463	Mus_pahari
ENSXMAG00000017682	pum2	100	81.971	MGP_SPRETEiJ_G0018447	Pum2	96	91.220	Mus_spretus
ENSXMAG00000017682	pum2	100	82.180	ENSMPUG00000013734	PUM2	96	91.463	Mustela_putorius_furo
ENSXMAG00000017682	pum2	100	81.761	ENSMLUG00000007362	PUM2	96	90.976	Myotis_lucifugus
ENSXMAG00000017682	pum2	100	70.000	ENSNGAG00000016665	-	100	74.468	Nannospalax_galili
ENSXMAG00000017682	pum2	99	45.933	ENSNGAG00000016239	-	99	51.109	Nannospalax_galili
ENSXMAG00000017682	pum2	100	86.047	ENSNBRG00000020737	pum2	100	84.116	Neolamprologus_brichardi
ENSXMAG00000017682	pum2	100	82.180	ENSNLEG00000002509	PUM2	96	91.463	Nomascus_leucogenys
ENSXMAG00000017682	pum2	93	70.637	ENSMEUG00000016567	PUM2	100	78.155	Notamacropus_eugenii
ENSXMAG00000017682	pum2	69	70.510	ENSOPRG00000001963	PUM2	93	61.722	Ochotona_princeps
ENSXMAG00000017682	pum2	100	76.371	ENSODEG00000007823	PUM2	100	75.400	Octodon_degus
ENSXMAG00000017682	pum2	100	95.298	ENSONIG00000006119	pum2	100	95.466	Oreochromis_niloticus
ENSXMAG00000017682	pum2	100	82.180	ENSOCUG00000017908	PUM2	96	91.463	Oryctolagus_cuniculus
ENSXMAG00000017682	pum2	100	92.394	ENSORLG00000012611	pum2	100	92.698	Oryzias_latipes
ENSXMAG00000017682	pum2	100	92.495	ENSORLG00020014452	pum2	100	92.799	Oryzias_latipes_hni
ENSXMAG00000017682	pum2	100	92.079	ENSORLG00015009427	pum2	100	92.327	Oryzias_latipes_hsok
ENSXMAG00000017682	pum2	94	91.221	ENSOMEG00000005889	pum2	100	91.328	Oryzias_melastigma
ENSXMAG00000017682	pum2	98	77.244	ENSOGAG00000002187	PUM2	100	75.653	Otolemur_garnettii
ENSXMAG00000017682	pum2	100	82.390	ENSOARG00000017236	PUM2	96	91.707	Ovis_aries
ENSXMAG00000017682	pum2	100	82.180	ENSPPAG00000023095	PUM2	96	91.463	Pan_paniscus
ENSXMAG00000017682	pum2	100	81.971	ENSPPRG00000021443	PUM2	96	91.220	Panthera_pardus
ENSXMAG00000017682	pum2	100	81.971	ENSPTIG00000018982	PUM2	96	91.220	Panthera_tigris_altaica
ENSXMAG00000017682	pum2	100	82.180	ENSPTRG00000011692	PUM2	96	91.463	Pan_troglodytes
ENSXMAG00000017682	pum2	100	64.757	ENSPANG00000009393	PUM2	100	84.722	Papio_anubis
ENSXMAG00000017682	pum2	100	69.721	ENSPKIG00000023195	pum2	100	72.718	Paramormyrops_kingsleyae
ENSXMAG00000017682	pum2	100	82.390	ENSPSIG00000011626	PUM2	85	90.976	Pelodiscus_sinensis
ENSXMAG00000017682	pum2	100	91.684	ENSPMGG00000016123	pum2	100	91.996	Periophthalmus_magnuspinnatus
ENSXMAG00000017682	pum2	100	69.722	ENSPEMG00000008357	Pum2	96	91.019	Peromyscus_maniculatus_bairdii
ENSXMAG00000017682	pum2	100	82.494	ENSPMAG00000007038	pum2	90	82.609	Petromyzon_marinus
ENSXMAG00000017682	pum2	99	78.702	ENSPCIG00000022139	PUM2	100	88.537	Phascolarctos_cinereus
ENSXMAG00000017682	pum2	100	99.257	ENSPFOG00000019208	pum2	100	99.257	Poecilia_formosa
ENSXMAG00000017682	pum2	100	99.492	ENSPLAG00000001826	pum2	100	99.492	Poecilia_latipinna
ENSXMAG00000017682	pum2	100	99.257	ENSPMEG00000015766	pum2	100	99.257	Poecilia_mexicana
ENSXMAG00000017682	pum2	100	98.884	ENSPREG00000006905	pum2	100	98.884	Poecilia_reticulata
ENSXMAG00000017682	pum2	100	82.180	ENSPPYG00000012617	PUM2	96	91.463	Pongo_abelii
ENSXMAG00000017682	pum2	76	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSXMAG00000017682	pum2	99	77.204	ENSPCOG00000019636	PUM2	96	91.019	Propithecus_coquereli
ENSXMAG00000017682	pum2	88	71.415	ENSPVAG00000002920	PUM2	100	69.238	Pteropus_vampyrus
ENSXMAG00000017682	pum2	100	95.062	ENSPNYG00000022901	pum2	100	95.226	Pundamilia_nyererei
ENSXMAG00000017682	pum2	98	88.756	ENSPNAG00000008025	pum2	100	87.474	Pygocentrus_nattereri
ENSXMAG00000017682	pum2	100	76.647	ENSRNOG00000006180	Pum2	96	90.976	Rattus_norvegicus
ENSXMAG00000017682	pum2	100	82.180	ENSRBIG00000044880	PUM2	96	91.463	Rhinopithecus_bieti
ENSXMAG00000017682	pum2	100	82.180	ENSSBOG00000022007	PUM2	96	91.463	Saimiri_boliviensis_boliviensis
ENSXMAG00000017682	pum2	98	78.557	ENSSHAG00000002778	PUM2	100	87.561	Sarcophilus_harrisii
ENSXMAG00000017682	pum2	87	84.199	ENSSFOG00015003476	pum2	86	91.262	Scleropages_formosus
ENSXMAG00000017682	pum2	100	93.004	ENSSMAG00000018236	pum2	100	93.580	Scophthalmus_maximus
ENSXMAG00000017682	pum2	92	96.350	ENSSDUG00000001800	pum2	100	96.350	Seriola_dumerili
ENSXMAG00000017682	pum2	100	95.305	ENSSLDG00000000981	pum2	100	95.305	Seriola_lalandi_dorsalis
ENSXMAG00000017682	pum2	96	70.486	ENSSARG00000010992	PUM2	81	82.805	Sorex_araneus
ENSXMAG00000017682	pum2	99	81.551	ENSSPUG00000017012	PUM2	96	90.732	Sphenodon_punctatus
ENSXMAG00000017682	pum2	100	96.862	ENSSPAG00000022948	pum2	100	96.862	Stegastes_partitus
ENSXMAG00000017682	pum2	100	82.180	ENSSSCG00000008600	PUM2	96	91.463	Sus_scrofa
ENSXMAG00000017682	pum2	100	81.761	ENSTGUG00000013149	PUM2	96	90.976	Taeniopygia_guttata
ENSXMAG00000017682	pum2	100	88.814	ENSTRUG00000018167	pum2	100	88.462	Takifugu_rubripes
ENSXMAG00000017682	pum2	100	91.297	ENSTNIG00000003116	pum2	100	90.711	Tetraodon_nigroviridis
ENSXMAG00000017682	pum2	82	81.420	ENSTBEG00000008729	PUM2	76	86.008	Tupaia_belangeri
ENSXMAG00000017682	pum2	100	81.420	ENSTTRG00000004887	PUM2	96	90.534	Tursiops_truncatus
ENSXMAG00000017682	pum2	69	82.107	ENSUAMG00000008120	PUM2	91	91.019	Ursus_americanus
ENSXMAG00000017682	pum2	100	82.180	ENSUMAG00000023198	PUM2	96	91.463	Ursus_maritimus
ENSXMAG00000017682	pum2	100	81.837	ENSVPAG00000005056	PUM2	96	91.019	Vicugna_pacos
ENSXMAG00000017682	pum2	100	82.180	ENSVVUG00000014829	PUM2	96	91.463	Vulpes_vulpes
ENSXMAG00000017682	pum2	100	69.727	ENSXETG00000008903	pum2	100	67.851	Xenopus_tropicalis
ENSXMAG00000017682	pum2	92	99.476	ENSXCOG00000002556	pum2	100	99.286	Xiphophorus_couchianus