EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017836 (Gene tree)
Gene ID: 102236557
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9585 bases
Position: chr20:13094691-13104275
Accession: 102236557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000017870	dsrm	PF00035.26	2.4e-35	1	2
ENSXMAP00000017870	dsrm	PF00035.26	2.4e-35	2	2
ENSXMAP00000017870	DND1_DSRM	PF14709.7	8.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000017896	-	5187	XM_014475936	ENSXMAP00000017870	345 (aa)	XP_014331422	M4ATS5

Gene Model

Click here to download ENSXMAG00000017836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017836	tarbp2	100	65.847	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSXMAG00000017836	tarbp2	100	93.333	ENSAPOG00000019892	tarbp2	100	93.333	Acanthochromis_polyacanthus
ENSXMAG00000017836	tarbp2	100	66.120	ENSAMEG00000012601	TARBP2	100	66.667	Ailuropoda_melanoleuca
ENSXMAG00000017836	tarbp2	100	90.435	ENSACIG00000016780	tarbp2	100	90.435	Amphilophus_citrinellus
ENSXMAG00000017836	tarbp2	100	92.754	ENSAOCG00000005201	tarbp2	100	92.754	Amphiprion_ocellaris
ENSXMAG00000017836	tarbp2	100	92.754	ENSAPEG00000008376	tarbp2	100	92.754	Amphiprion_percula
ENSXMAG00000017836	tarbp2	100	91.884	ENSATEG00000025012	tarbp2	100	91.884	Anabas_testudineus
ENSXMAG00000017836	tarbp2	99	69.359	ENSACAG00000001100	TARBP2	99	69.359	Anolis_carolinensis
ENSXMAG00000017836	tarbp2	100	66.120	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSXMAG00000017836	tarbp2	97	89.552	ENSACLG00000018569	tarbp2	97	89.552	Astatotilapia_calliptera
ENSXMAG00000017836	tarbp2	100	81.921	ENSAMXG00000016665	tarbp2	100	84.682	Astyanax_mexicanus
ENSXMAG00000017836	tarbp2	100	67.213	ENSBTAG00000000435	TARBP2	100	67.486	Bos_taurus
ENSXMAG00000017836	tarbp2	100	66.393	ENSCJAG00000018668	TARBP2	100	66.667	Callithrix_jacchus
ENSXMAG00000017836	tarbp2	100	69.164	ENSCAFG00000006874	TARBP2	100	69.164	Canis_familiaris
ENSXMAG00000017836	tarbp2	100	66.120	ENSCAFG00020020735	TARBP2	100	68.696	Canis_lupus_dingo
ENSXMAG00000017836	tarbp2	100	66.038	ENSCHIG00000026017	TARBP2	100	65.946	Capra_hircus
ENSXMAG00000017836	tarbp2	100	66.393	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSXMAG00000017836	tarbp2	65	71.111	ENSCAPG00000008981	TARBP2	100	71.111	Cavia_aperea
ENSXMAG00000017836	tarbp2	100	66.940	ENSCPOG00000001009	TARBP2	100	66.667	Cavia_porcellus
ENSXMAG00000017836	tarbp2	95	68.481	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSXMAG00000017836	tarbp2	100	65.574	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSXMAG00000017836	tarbp2	100	66.393	ENSCLAG00000009175	TARBP2	100	66.393	Chinchilla_lanigera
ENSXMAG00000017836	tarbp2	100	65.574	ENSCSAG00000005479	TARBP2	100	66.667	Chlorocebus_sabaeus
ENSXMAG00000017836	tarbp2	100	69.806	ENSCPBG00000000654	TARBP2	100	71.471	Chrysemys_picta_bellii
ENSXMAG00000017836	tarbp2	100	65.847	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSXMAG00000017836	tarbp2	100	66.027	ENSCGRG00001011856	TARBP2	100	66.301	Cricetulus_griseus_chok1gshd
ENSXMAG00000017836	tarbp2	100	66.027	ENSCGRG00000009088	TARBP2	100	68.313	Cricetulus_griseus_crigri
ENSXMAG00000017836	tarbp2	100	91.014	ENSCSEG00000010631	tarbp2	100	91.014	Cynoglossus_semilaevis
ENSXMAG00000017836	tarbp2	100	94.783	ENSCVAG00000009832	tarbp2	100	94.783	Cyprinodon_variegatus
ENSXMAG00000017836	tarbp2	100	82.759	ENSDARG00000070471	tarbp2	100	83.046	Danio_rerio
ENSXMAG00000017836	tarbp2	100	66.393	ENSDNOG00000002144	TARBP2	100	66.667	Dasypus_novemcinctus
ENSXMAG00000017836	tarbp2	63	71.946	ENSDORG00000001390	Tarbp2	91	71.946	Dipodomys_ordii
ENSXMAG00000017836	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSXMAG00000017836	tarbp2	95	57.927	ENSEBUG00000002377	tarbp2	98	58.841	Eptatretus_burgeri
ENSXMAG00000017836	tarbp2	100	67.213	ENSEASG00005010030	TARBP2	100	67.213	Equus_asinus_asinus
ENSXMAG00000017836	tarbp2	100	69.034	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSXMAG00000017836	tarbp2	84	63.810	ENSEEUG00000001128	-	99	63.141	Erinaceus_europaeus
ENSXMAG00000017836	tarbp2	100	86.494	ENSELUG00000010642	tarbp2	100	88.539	Esox_lucius
ENSXMAG00000017836	tarbp2	100	66.667	ENSFCAG00000007757	TARBP2	100	67.213	Felis_catus
ENSXMAG00000017836	tarbp2	100	66.393	ENSFDAG00000011932	TARBP2	100	68.852	Fukomys_damarensis
ENSXMAG00000017836	tarbp2	94	95.370	ENSFHEG00000016118	tarbp2	100	95.370	Fundulus_heteroclitus
ENSXMAG00000017836	tarbp2	100	85.591	ENSGMOG00000001290	tarbp2	100	85.591	Gadus_morhua
ENSXMAG00000017836	tarbp2	63	72.146	ENSGALG00000038939	-	83	72.146	Gallus_gallus
ENSXMAG00000017836	tarbp2	100	97.681	ENSGAFG00000013341	tarbp2	100	97.681	Gambusia_affinis
ENSXMAG00000017836	tarbp2	100	87.887	ENSGACG00000006645	tarbp2	100	88.169	Gasterosteus_aculeatus
ENSXMAG00000017836	tarbp2	100	70.083	ENSGAGG00000021169	TARBP2	100	69.806	Gopherus_agassizii
ENSXMAG00000017836	tarbp2	95	68.195	ENSGGOG00000012637	TARBP2	72	92.982	Gorilla_gorilla
ENSXMAG00000017836	tarbp2	100	90.145	ENSHBUG00000018639	tarbp2	100	90.145	Haplochromis_burtoni
ENSXMAG00000017836	tarbp2	100	66.120	ENSHGLG00000001284	TARBP2	100	66.120	Heterocephalus_glaber_female
ENSXMAG00000017836	tarbp2	100	66.120	ENSHGLG00100011274	TARBP2	100	66.120	Heterocephalus_glaber_male
ENSXMAG00000017836	tarbp2	100	85.507	ENSHCOG00000001027	tarbp2	100	85.507	Hippocampus_comes
ENSXMAG00000017836	tarbp2	100	81.948	ENSIPUG00000023701	tarbp2	100	81.948	Ictalurus_punctatus
ENSXMAG00000017836	tarbp2	95	69.628	ENSSTOG00000003678	TARBP2	100	68.852	Ictidomys_tridecemlineatus
ENSXMAG00000017836	tarbp2	100	93.623	ENSKMAG00000012142	tarbp2	100	93.623	Kryptolebias_marmoratus
ENSXMAG00000017836	tarbp2	100	90.678	ENSLBEG00000015027	tarbp2	100	90.678	Labrus_bergylta
ENSXMAG00000017836	tarbp2	95	66.463	ENSLACG00000007087	TARBP2	95	66.869	Latimeria_chalumnae
ENSXMAG00000017836	tarbp2	100	81.034	ENSLOCG00000005711	tarbp2	100	81.034	Lepisosteus_oculatus
ENSXMAG00000017836	tarbp2	71	65.267	ENSLAFG00000002620	TARBP2	93	65.267	Loxodonta_africana
ENSXMAG00000017836	tarbp2	100	65.574	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSXMAG00000017836	tarbp2	100	65.847	ENSMMUG00000018492	TARBP2	100	66.940	Macaca_mulatta
ENSXMAG00000017836	tarbp2	100	65.574	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSXMAG00000017836	tarbp2	100	65.574	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSXMAG00000017836	tarbp2	95	89.297	ENSMAMG00000010272	tarbp2	97	88.081	Mastacembelus_armatus
ENSXMAG00000017836	tarbp2	100	90.725	ENSMZEG00005006895	tarbp2	100	90.725	Maylandia_zebra
ENSXMAG00000017836	tarbp2	100	64.946	ENSMAUG00000019805	Tarbp2	100	66.849	Mesocricetus_auratus
ENSXMAG00000017836	tarbp2	94	68.696	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSXMAG00000017836	tarbp2	100	66.849	ENSMOCG00000003691	Tarbp2	100	66.849	Microtus_ochrogaster
ENSXMAG00000017836	tarbp2	94	89.697	ENSMMOG00000010374	tarbp2	100	89.697	Mola_mola
ENSXMAG00000017836	tarbp2	100	90.725	ENSMALG00000009773	tarbp2	100	90.725	Monopterus_albus
ENSXMAG00000017836	tarbp2	100	66.027	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSXMAG00000017836	tarbp2	100	66.027	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSXMAG00000017836	tarbp2	100	66.027	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSXMAG00000017836	tarbp2	100	66.027	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSXMAG00000017836	tarbp2	100	66.849	ENSMPUG00000005944	TARBP2	100	66.849	Mustela_putorius_furo
ENSXMAG00000017836	tarbp2	100	67.486	ENSMLUG00000010035	TARBP2	100	67.486	Myotis_lucifugus
ENSXMAG00000017836	tarbp2	100	65.847	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSXMAG00000017836	tarbp2	100	70.231	ENSMEUG00000001916	TARBP2	100	70.231	Notamacropus_eugenii
ENSXMAG00000017836	tarbp2	65	72.444	ENSOPRG00000011397	TARBP2	100	72.444	Ochotona_princeps
ENSXMAG00000017836	tarbp2	60	71.681	ENSODEG00000013413	TARBP2	100	71.681	Octodon_degus
ENSXMAG00000017836	tarbp2	95	86.494	ENSONIG00000005115	tarbp2	96	86.494	Oreochromis_niloticus
ENSXMAG00000017836	tarbp2	100	68.306	ENSOCUG00000005700	TARBP2	100	68.306	Oryctolagus_cuniculus
ENSXMAG00000017836	tarbp2	100	90.145	ENSORLG00000005209	tarbp2	100	90.145	Oryzias_latipes
ENSXMAG00000017836	tarbp2	100	89.855	ENSORLG00020017755	tarbp2	100	89.855	Oryzias_latipes_hni
ENSXMAG00000017836	tarbp2	100	90.145	ENSORLG00015013237	tarbp2	100	90.145	Oryzias_latipes_hsok
ENSXMAG00000017836	tarbp2	100	91.014	ENSOMEG00000018860	tarbp2	100	91.014	Oryzias_melastigma
ENSXMAG00000017836	tarbp2	100	64.879	ENSOGAG00000001744	TARBP2	100	66.120	Otolemur_garnettii
ENSXMAG00000017836	tarbp2	100	66.940	ENSOARG00000016437	TARBP2	100	67.213	Ovis_aries
ENSXMAG00000017836	tarbp2	100	65.847	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSXMAG00000017836	tarbp2	100	66.667	ENSPPRG00000000189	TARBP2	100	67.213	Panthera_pardus
ENSXMAG00000017836	tarbp2	100	68.889	ENSPTIG00000007859	TARBP2	100	68.889	Panthera_tigris_altaica
ENSXMAG00000017836	tarbp2	100	65.847	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSXMAG00000017836	tarbp2	100	65.574	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSXMAG00000017836	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSXMAG00000017836	tarbp2	100	90.435	ENSPMGG00000006497	tarbp2	100	90.435	Periophthalmus_magnuspinnatus
ENSXMAG00000017836	tarbp2	100	64.932	ENSPEMG00000014285	Tarbp2	100	64.932	Peromyscus_maniculatus_bairdii
ENSXMAG00000017836	tarbp2	92	60.625	ENSPMAG00000000105	tarbp2	99	60.625	Petromyzon_marinus
ENSXMAG00000017836	tarbp2	100	69.855	ENSPCIG00000006672	TARBP2	92	69.855	Phascolarctos_cinereus
ENSXMAG00000017836	tarbp2	100	98.841	ENSPFOG00000007586	tarbp2	100	98.841	Poecilia_formosa
ENSXMAG00000017836	tarbp2	100	98.261	ENSPLAG00000017659	tarbp2	100	98.261	Poecilia_latipinna
ENSXMAG00000017836	tarbp2	100	98.841	ENSPMEG00000007775	tarbp2	100	98.841	Poecilia_mexicana
ENSXMAG00000017836	tarbp2	100	98.261	ENSPREG00000007815	tarbp2	100	98.261	Poecilia_reticulata
ENSXMAG00000017836	tarbp2	95	67.976	ENSPPYG00000004583	TARBP2	95	68.675	Pongo_abelii
ENSXMAG00000017836	tarbp2	78	64.605	ENSPCAG00000005352	TARBP2	63	70.870	Procavia_capensis
ENSXMAG00000017836	tarbp2	100	66.940	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSXMAG00000017836	tarbp2	100	65.217	ENSPVAG00000012286	TARBP2	100	65.217	Pteropus_vampyrus
ENSXMAG00000017836	tarbp2	100	90.435	ENSPNYG00000014125	tarbp2	100	90.435	Pundamilia_nyererei
ENSXMAG00000017836	tarbp2	100	84.682	ENSPNAG00000011128	tarbp2	100	84.971	Pygocentrus_nattereri
ENSXMAG00000017836	tarbp2	100	65.205	ENSRNOG00000042355	Tarbp2	100	66.304	Rattus_norvegicus
ENSXMAG00000017836	tarbp2	100	65.847	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSXMAG00000017836	tarbp2	100	65.847	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSXMAG00000017836	tarbp2	100	66.120	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSXMAG00000017836	tarbp2	94	72.840	ENSSHAG00000007064	TARBP2	100	72.840	Sarcophilus_harrisii
ENSXMAG00000017836	tarbp2	100	79.224	ENSSFOG00015010784	tarbp2	100	80.447	Scleropages_formosus
ENSXMAG00000017836	tarbp2	100	90.598	ENSSMAG00000012769	tarbp2	100	90.598	Scophthalmus_maximus
ENSXMAG00000017836	tarbp2	100	92.754	ENSSDUG00000018818	tarbp2	100	92.754	Seriola_dumerili
ENSXMAG00000017836	tarbp2	100	92.464	ENSSLDG00000001835	tarbp2	100	92.464	Seriola_lalandi_dorsalis
ENSXMAG00000017836	tarbp2	76	68.657	ENSSARG00000001010	TARBP2	73	68.657	Sorex_araneus
ENSXMAG00000017836	tarbp2	99	52.478	ENSSPUG00000005895	TARBP2	98	53.179	Sphenodon_punctatus
ENSXMAG00000017836	tarbp2	100	93.623	ENSSPAG00000022797	tarbp2	100	93.623	Stegastes_partitus
ENSXMAG00000017836	tarbp2	100	66.120	ENSSSCG00000000276	TARBP2	100	68.406	Sus_scrofa
ENSXMAG00000017836	tarbp2	71	56.107	ENSTGUG00000017031	TARBP2	100	56.107	Taeniopygia_guttata
ENSXMAG00000017836	tarbp2	100	90.725	ENSTRUG00000014379	tarbp2	100	90.725	Takifugu_rubripes
ENSXMAG00000017836	tarbp2	100	89.855	ENSTNIG00000007065	tarbp2	100	89.855	Tetraodon_nigroviridis
ENSXMAG00000017836	tarbp2	100	66.667	ENSTTRG00000017177	TARBP2	100	66.940	Tursiops_truncatus
ENSXMAG00000017836	tarbp2	100	66.393	ENSUAMG00000009011	TARBP2	100	66.940	Ursus_americanus
ENSXMAG00000017836	tarbp2	100	65.847	ENSUMAG00000010461	TARBP2	100	66.393	Ursus_maritimus
ENSXMAG00000017836	tarbp2	100	66.120	ENSVVUG00000028150	TARBP2	100	68.696	Vulpes_vulpes
ENSXMAG00000017836	tarbp2	97	71.512	ENSXETG00000012644	tarbp2	97	71.221	Xenopus_tropicalis