EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000017978 (Gene tree)
Gene ID: 102216904
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 49783 bases
Position: chr20:12644110-12693892
Accession: 102216904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000021265	R3H	PF01424.22	8.2e-11	1	1
ENSXMAP00000037022	R3H	PF01424.22	9.7e-11	1	1
ENSXMAP00000018043	R3H	PF01424.22	1e-10	1	1
ENSXMAP00000039024	R3H	PF01424.22	1e-10	1	1
ENSXMAP00000035585	R3H	PF01424.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018070	-	4760	XM_014475962	ENSXMAP00000018043	1073 (aa)	XP_014331448	M4AU98
ENSXMAT00000030205	-	5047	XM_023324882	ENSXMAP00000037022	1067 (aa)	XP_023180650	-
ENSXMAT00000037811	-	5146	-	ENSXMAP00000039024	1100 (aa)	-	-
ENSXMAT00000036357	-	2553	-	ENSXMAP00000021265	850 (aa)	-	-
ENSXMAT00000023320	-	5092	XM_014475965	ENSXMAP00000035585	1082 (aa)	XP_014331451	-

Gene Model

Click here to download ENSXMAG00000017978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000017978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000017978	r3hdm2	100	66.860	ENSG00000179912	R3HDM2	88	81.377	Homo_sapiens
ENSXMAG00000017978	r3hdm2	100	91.605	ENSAPOG00000020341	r3hdm2	100	92.329	Acanthochromis_polyacanthus
ENSXMAG00000017978	r3hdm2	51	40.036	ENSAPOG00000021873	-	73	39.416	Acanthochromis_polyacanthus
ENSXMAG00000017978	r3hdm2	95	66.988	ENSAMEG00000004812	R3HDM2	99	64.338	Ailuropoda_melanoleuca
ENSXMAG00000017978	r3hdm2	100	91.176	ENSACIG00000016146	r3hdm2	98	84.481	Amphilophus_citrinellus
ENSXMAG00000017978	r3hdm2	100	91.697	ENSAOCG00000023694	r3hdm2	100	92.606	Amphiprion_ocellaris
ENSXMAG00000017978	r3hdm2	100	90.129	ENSAPEG00000008851	r3hdm2	100	92.575	Amphiprion_percula
ENSXMAG00000017978	r3hdm2	100	87.415	ENSATEG00000025024	r3hdm2	100	88.968	Anabas_testudineus
ENSXMAG00000017978	r3hdm2	99	55.479	ENSAPLG00000004298	R3HDM2	99	59.574	Anas_platyrhynchos
ENSXMAG00000017978	r3hdm2	100	62.092	ENSACAG00000006388	R3HDM2	99	59.608	Anolis_carolinensis
ENSXMAG00000017978	r3hdm2	100	60.815	ENSANAG00000031310	-	98	61.683	Aotus_nancymaae
ENSXMAG00000017978	r3hdm2	100	66.744	ENSANAG00000025397	-	99	63.714	Aotus_nancymaae
ENSXMAG00000017978	r3hdm2	100	91.405	ENSACLG00000019106	r3hdm2	100	92.185	Astatotilapia_calliptera
ENSXMAG00000017978	r3hdm2	100	69.056	ENSAMXG00000017180	r3hdm2	99	71.328	Astyanax_mexicanus
ENSXMAG00000017978	r3hdm2	100	63.453	ENSBTAG00000018361	R3HDM2	99	62.571	Bos_taurus
ENSXMAG00000017978	r3hdm2	100	66.127	ENSCJAG00000007365	R3HDM2	99	63.429	Callithrix_jacchus
ENSXMAG00000017978	r3hdm2	100	63.799	ENSCAFG00000000215	R3HDM2	99	62.952	Canis_familiaris
ENSXMAG00000017978	r3hdm2	100	66.279	ENSCAFG00020023713	R3HDM2	99	65.032	Canis_lupus_dingo
ENSXMAG00000017978	r3hdm2	100	63.977	ENSCHIG00000014022	R3HDM2	99	64.486	Capra_hircus
ENSXMAG00000017978	r3hdm2	100	66.047	ENSTSYG00000001449	R3HDM2	99	64.183	Carlito_syrichta
ENSXMAG00000017978	r3hdm2	99	66.081	ENSCPOG00000009217	R3HDM2	99	64.662	Cavia_porcellus
ENSXMAG00000017978	r3hdm2	85	67.344	ENSCCAG00000026083	R3HDM2	99	63.814	Cebus_capucinus
ENSXMAG00000017978	r3hdm2	100	66.628	ENSCATG00000036929	R3HDM2	99	64.766	Cercocebus_atys
ENSXMAG00000017978	r3hdm2	99	66.113	ENSCLAG00000011997	R3HDM2	99	64.972	Chinchilla_lanigera
ENSXMAG00000017978	r3hdm2	99	64.463	ENSCSAG00000004911	R3HDM2	99	64.888	Chlorocebus_sabaeus
ENSXMAG00000017978	r3hdm2	73	66.203	ENSCHOG00000005636	R3HDM2	89	67.460	Choloepus_hoffmanni
ENSXMAG00000017978	r3hdm2	100	61.194	ENSCPBG00000013922	R3HDM2	99	62.240	Chrysemys_picta_bellii
ENSXMAG00000017978	r3hdm2	100	66.127	ENSCANG00000043807	R3HDM2	99	64.579	Colobus_angolensis_palliatus
ENSXMAG00000017978	r3hdm2	100	62.864	ENSCGRG00001017324	R3hdm2	99	63.863	Cricetulus_griseus_chok1gshd
ENSXMAG00000017978	r3hdm2	100	63.068	ENSCGRG00000003862	R3hdm2	99	63.863	Cricetulus_griseus_crigri
ENSXMAG00000017978	r3hdm2	100	89.610	ENSCSEG00000010925	r3hdm2	99	90.442	Cynoglossus_semilaevis
ENSXMAG00000017978	r3hdm2	100	96.272	ENSCVAG00000009058	r3hdm2	100	96.398	Cyprinodon_variegatus
ENSXMAG00000017978	r3hdm2	100	68.785	ENSDARG00000102610	r3hdm2	99	73.161	Danio_rerio
ENSXMAG00000017978	r3hdm2	100	62.889	ENSDNOG00000015033	R3HDM2	100	65.413	Dasypus_novemcinctus
ENSXMAG00000017978	r3hdm2	100	63.080	ENSDORG00000011462	R3hdm2	99	62.687	Dipodomys_ordii
ENSXMAG00000017978	r3hdm2	100	63.942	ENSEASG00005007091	R3HDM2	99	64.940	Equus_asinus_asinus
ENSXMAG00000017978	r3hdm2	100	63.960	ENSECAG00000003157	R3HDM2	99	65.037	Equus_caballus
ENSXMAG00000017978	r3hdm2	100	78.687	ENSELUG00000015969	r3hdm2	100	77.535	Esox_lucius
ENSXMAG00000017978	r3hdm2	100	65.930	ENSFCAG00000000192	R3HDM2	98	64.057	Felis_catus
ENSXMAG00000017978	r3hdm2	81	63.140	ENSFALG00000000255	R3HDM2	99	59.503	Ficedula_albicollis
ENSXMAG00000017978	r3hdm2	100	63.504	ENSFDAG00000019385	R3HDM2	99	64.576	Fukomys_damarensis
ENSXMAG00000017978	r3hdm2	100	97.297	ENSFHEG00000016484	r3hdm2	100	97.297	Fundulus_heteroclitus
ENSXMAG00000017978	r3hdm2	52	37.119	ENSFHEG00000007936	-	69	40.000	Fundulus_heteroclitus
ENSXMAG00000017978	r3hdm2	95	82.031	ENSGMOG00000007961	r3hdm2	100	81.934	Gadus_morhua
ENSXMAG00000017978	r3hdm2	100	63.255	ENSGALG00000043736	R3HDM2	99	63.168	Gallus_gallus
ENSXMAG00000017978	r3hdm2	100	98.788	ENSGAFG00000013887	r3hdm2	100	98.788	Gambusia_affinis
ENSXMAG00000017978	r3hdm2	95	89.756	ENSGACG00000006442	r3hdm2	100	89.659	Gasterosteus_aculeatus
ENSXMAG00000017978	r3hdm2	100	61.472	ENSGAGG00000017797	R3HDM2	99	61.862	Gopherus_agassizii
ENSXMAG00000017978	r3hdm2	100	66.628	ENSGGOG00000015007	R3HDM2	99	64.766	Gorilla_gorilla
ENSXMAG00000017978	r3hdm2	52	37.748	ENSHBUG00000018525	-	71	39.883	Haplochromis_burtoni
ENSXMAG00000017978	r3hdm2	99	60.490	ENSHGLG00000010421	-	97	57.900	Heterocephalus_glaber_female
ENSXMAG00000017978	r3hdm2	100	64.391	ENSHGLG00000010434	-	99	63.206	Heterocephalus_glaber_female
ENSXMAG00000017978	r3hdm2	100	63.942	ENSHGLG00100004183	-	99	63.115	Heterocephalus_glaber_male
ENSXMAG00000017978	r3hdm2	97	58.563	ENSHGLG00100018871	-	96	57.246	Heterocephalus_glaber_male
ENSXMAG00000017978	r3hdm2	100	85.397	ENSHCOG00000001142	r3hdm2	99	86.313	Hippocampus_comes
ENSXMAG00000017978	r3hdm2	100	74.864	ENSIPUG00000023873	r3hdm2	100	76.471	Ictalurus_punctatus
ENSXMAG00000017978	r3hdm2	100	63.886	ENSSTOG00000013424	R3HDM2	99	60.496	Ictidomys_tridecemlineatus
ENSXMAG00000017978	r3hdm2	100	64.424	ENSJJAG00000010001	R3hdm2	99	64.576	Jaculus_jaculus
ENSXMAG00000017978	r3hdm2	100	92.237	ENSKMAG00000012695	r3hdm2	98	92.963	Kryptolebias_marmoratus
ENSXMAG00000017978	r3hdm2	52	37.586	ENSKMAG00000004052	-	70	38.780	Kryptolebias_marmoratus
ENSXMAG00000017978	r3hdm2	100	90.724	ENSLBEG00000013115	r3hdm2	99	89.221	Labrus_bergylta
ENSXMAG00000017978	r3hdm2	51	39.267	ENSLBEG00000002779	-	52	47.181	Labrus_bergylta
ENSXMAG00000017978	r3hdm2	95	66.570	ENSLACG00000019064	r3hdm2	100	65.053	Latimeria_chalumnae
ENSXMAG00000017978	r3hdm2	100	73.236	ENSLOCG00000005976	r3hdm2	99	71.308	Lepisosteus_oculatus
ENSXMAG00000017978	r3hdm2	99	65.802	ENSLAFG00000006510	R3HDM2	99	65.242	Loxodonta_africana
ENSXMAG00000017978	r3hdm2	100	66.628	ENSMFAG00000036385	R3HDM2	99	64.766	Macaca_fascicularis
ENSXMAG00000017978	r3hdm2	100	66.628	ENSMMUG00000021789	R3HDM2	99	65.314	Macaca_mulatta
ENSXMAG00000017978	r3hdm2	100	66.783	ENSMNEG00000025314	R3HDM2	99	64.766	Macaca_nemestrina
ENSXMAG00000017978	r3hdm2	100	66.744	ENSMLEG00000028915	R3HDM2	99	64.860	Mandrillus_leucophaeus
ENSXMAG00000017978	r3hdm2	100	91.922	ENSMAMG00000009793	r3hdm2	100	91.852	Mastacembelus_armatus
ENSXMAG00000017978	r3hdm2	100	91.405	ENSMZEG00005007319	r3hdm2	100	91.759	Maylandia_zebra
ENSXMAG00000017978	r3hdm2	100	65.741	ENSMICG00000012389	R3HDM2	99	62.108	Microcebus_murinus
ENSXMAG00000017978	r3hdm2	99	64.662	ENSMOCG00000014425	R3hdm2	99	64.107	Microtus_ochrogaster
ENSXMAG00000017978	r3hdm2	100	84.925	ENSMMOG00000007448	r3hdm2	99	84.008	Mola_mola
ENSXMAG00000017978	r3hdm2	100	80.729	ENSMALG00000010211	r3hdm2	98	84.814	Monopterus_albus
ENSXMAG00000017978	r3hdm2	100	63.564	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.140	Mus_caroli
ENSXMAG00000017978	r3hdm2	99	65.005	ENSMUSG00000025404	R3hdm2	99	64.385	Mus_musculus
ENSXMAG00000017978	r3hdm2	100	63.270	MGP_PahariEiJ_G0031189	R3hdm2	99	64.385	Mus_pahari
ENSXMAG00000017978	r3hdm2	99	64.977	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.081	Mus_spretus
ENSXMAG00000017978	r3hdm2	97	64.601	ENSMPUG00000001818	R3HDM2	97	64.126	Mustela_putorius_furo
ENSXMAG00000017978	r3hdm2	96	67.179	ENSMLUG00000004980	R3HDM2	99	64.668	Myotis_lucifugus
ENSXMAG00000017978	r3hdm2	99	65.101	ENSNGAG00000018800	R3hdm2	99	65.125	Nannospalax_galili
ENSXMAG00000017978	r3hdm2	100	90.706	ENSNBRG00000004483	r3hdm2	100	84.796	Neolamprologus_brichardi
ENSXMAG00000017978	r3hdm2	100	66.744	ENSNLEG00000017351	R3HDM2	99	64.860	Nomascus_leucogenys
ENSXMAG00000017978	r3hdm2	99	56.879	ENSMEUG00000008588	R3HDM2	99	55.771	Notamacropus_eugenii
ENSXMAG00000017978	r3hdm2	100	60.820	ENSOPRG00000013670	R3HDM2	99	58.317	Ochotona_princeps
ENSXMAG00000017978	r3hdm2	100	87.769	ENSONIG00000005075	r3hdm2	100	87.704	Oreochromis_niloticus
ENSXMAG00000017978	r3hdm2	99	64.885	ENSOCUG00000013258	R3HDM2	99	64.483	Oryctolagus_cuniculus
ENSXMAG00000017978	r3hdm2	100	90.308	ENSORLG00000005502	r3hdm2	100	90.587	Oryzias_latipes
ENSXMAG00000017978	r3hdm2	100	90.308	ENSORLG00020017069	r3hdm2	100	90.616	Oryzias_latipes_hni
ENSXMAG00000017978	r3hdm2	100	90.401	ENSORLG00015012735	r3hdm2	100	90.711	Oryzias_latipes_hsok
ENSXMAG00000017978	r3hdm2	100	87.237	ENSOMEG00000018079	r3hdm2	99	81.556	Oryzias_melastigma
ENSXMAG00000017978	r3hdm2	95	56.228	ENSOGAG00000027966	-	99	54.624	Otolemur_garnettii
ENSXMAG00000017978	r3hdm2	100	60.912	ENSOGAG00000012055	R3HDM2	99	61.985	Otolemur_garnettii
ENSXMAG00000017978	r3hdm2	100	62.778	ENSOARG00000006929	R3HDM2	99	62.298	Ovis_aries
ENSXMAG00000017978	r3hdm2	100	66.860	ENSPPAG00000034395	R3HDM2	99	64.953	Pan_paniscus
ENSXMAG00000017978	r3hdm2	100	65.930	ENSPPRG00000009240	R3HDM2	99	62.131	Panthera_pardus
ENSXMAG00000017978	r3hdm2	100	65.930	ENSPTIG00000008752	R3HDM2	99	62.131	Panthera_tigris_altaica
ENSXMAG00000017978	r3hdm2	100	66.744	ENSPTRG00000046457	R3HDM2	99	64.860	Pan_troglodytes
ENSXMAG00000017978	r3hdm2	100	66.744	ENSPANG00000024002	R3HDM2	97	65.196	Papio_anubis
ENSXMAG00000017978	r3hdm2	100	78.704	ENSPKIG00000003171	r3hdm2	100	79.567	Paramormyrops_kingsleyae
ENSXMAG00000017978	r3hdm2	65	53.090	ENSPSIG00000006954	R3HDM2	99	52.243	Pelodiscus_sinensis
ENSXMAG00000017978	r3hdm2	100	87.412	ENSPMGG00000007061	r3hdm2	99	84.687	Periophthalmus_magnuspinnatus
ENSXMAG00000017978	r3hdm2	99	64.510	ENSPEMG00000015964	R3hdm2	99	64.015	Peromyscus_maniculatus_bairdii
ENSXMAG00000017978	r3hdm2	100	63.440	ENSPCIG00000023841	R3HDM2	99	62.345	Phascolarctos_cinereus
ENSXMAG00000017978	r3hdm2	100	82.286	ENSPFOG00000006077	r3hdm2	98	87.870	Poecilia_formosa
ENSXMAG00000017978	r3hdm2	100	99.176	ENSPLAG00000002971	r3hdm2	100	99.242	Poecilia_latipinna
ENSXMAG00000017978	r3hdm2	100	99.176	ENSPMEG00000005330	r3hdm2	100	99.242	Poecilia_mexicana
ENSXMAG00000017978	r3hdm2	100	98.695	ENSPREG00000008424	r3hdm2	100	98.695	Poecilia_reticulata
ENSXMAG00000017978	r3hdm2	97	61.871	ENSPPYG00000004685	R3HDM2	80	59.786	Pongo_abelii
ENSXMAG00000017978	r3hdm2	88	78.445	ENSPCAG00000014642	R3HDM2	92	79.505	Procavia_capensis
ENSXMAG00000017978	r3hdm2	100	65.581	ENSPCOG00000013201	R3HDM2	99	62.857	Propithecus_coquereli
ENSXMAG00000017978	r3hdm2	96	67.274	ENSPVAG00000003967	R3HDM2	99	64.662	Pteropus_vampyrus
ENSXMAG00000017978	r3hdm2	100	81.151	ENSPNYG00000013479	r3hdm2	100	83.723	Pundamilia_nyererei
ENSXMAG00000017978	r3hdm2	100	75.497	ENSPNAG00000017473	r3hdm2	100	77.215	Pygocentrus_nattereri
ENSXMAG00000017978	r3hdm2	100	62.864	ENSRNOG00000007801	R3hdm2	99	63.586	Rattus_norvegicus
ENSXMAG00000017978	r3hdm2	100	63.230	ENSRBIG00000037403	R3HDM2	99	61.429	Rhinopithecus_bieti
ENSXMAG00000017978	r3hdm2	100	66.744	ENSRROG00000022271	R3HDM2	99	64.860	Rhinopithecus_roxellana
ENSXMAG00000017978	r3hdm2	100	66.243	ENSSBOG00000023547	R3HDM2	99	63.048	Saimiri_boliviensis_boliviensis
ENSXMAG00000017978	r3hdm2	99	63.712	ENSSHAG00000003511	R3HDM2	99	63.341	Sarcophilus_harrisii
ENSXMAG00000017978	r3hdm2	100	75.339	ENSSFOG00015011219	r3hdm2	99	76.536	Scleropages_formosus
ENSXMAG00000017978	r3hdm2	100	91.163	ENSSMAG00000012073	r3hdm2	100	90.968	Scophthalmus_maximus
ENSXMAG00000017978	r3hdm2	100	90.176	ENSSDUG00000019269	r3hdm2	100	91.541	Seriola_dumerili
ENSXMAG00000017978	r3hdm2	100	91.736	ENSSLDG00000005252	r3hdm2	100	91.759	Seriola_lalandi_dorsalis
ENSXMAG00000017978	r3hdm2	90	61.033	ENSSARG00000003958	R3HDM2	80	69.737	Sorex_araneus
ENSXMAG00000017978	r3hdm2	100	59.913	ENSSPUG00000014132	R3HDM2	99	58.202	Sphenodon_punctatus
ENSXMAG00000017978	r3hdm2	100	90.111	ENSSPAG00000022594	r3hdm2	100	92.293	Stegastes_partitus
ENSXMAG00000017978	r3hdm2	100	66.012	ENSSSCG00000026498	R3HDM2	100	65.976	Sus_scrofa
ENSXMAG00000017978	r3hdm2	72	63.384	ENSTGUG00000015881	R3HDM2	99	61.499	Taeniopygia_guttata
ENSXMAG00000017978	r3hdm2	100	89.072	ENSTRUG00000015075	r3hdm2	99	82.591	Takifugu_rubripes
ENSXMAG00000017978	r3hdm2	90	95.330	ENSTNIG00000007057	r3hdm2	90	95.330	Tetraodon_nigroviridis
ENSXMAG00000017978	r3hdm2	82	64.286	ENSTBEG00000015967	R3HDM2	75	64.286	Tupaia_belangeri
ENSXMAG00000017978	r3hdm2	86	75.635	ENSTTRG00000013082	R3HDM2	94	61.702	Tursiops_truncatus
ENSXMAG00000017978	r3hdm2	100	63.677	ENSUAMG00000020913	R3HDM2	99	64.574	Ursus_americanus
ENSXMAG00000017978	r3hdm2	100	65.741	ENSUMAG00000019179	R3HDM2	96	64.590	Ursus_maritimus
ENSXMAG00000017978	r3hdm2	90	80.328	ENSVPAG00000008656	R3HDM2	89	80.135	Vicugna_pacos
ENSXMAG00000017978	r3hdm2	93	67.163	ENSVVUG00000018014	R3HDM2	95	64.340	Vulpes_vulpes
ENSXMAG00000017978	r3hdm2	99	62.142	ENSXETG00000017153	r3hdm2	99	60.074	Xenopus_tropicalis
ENSXMAG00000017978	r3hdm2	100	99.765	ENSXCOG00000013882	r3hdm2	100	99.765	Xiphophorus_couchianus