EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018000 (Gene tree)
Gene ID: 102220052
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 23956 bases
Position: chr23:4972697-4996652
Accession: 102220052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018032	SRP72	PF08492.12	9.6e-20	1	1
ENSXMAP00000018381	SRP72	PF08492.12	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018408	-	3101	XM_023329030	ENSXMAP00000018381	734 (aa)	XP_023184798	M4AV86
ENSXMAT00000018059	-	2013	-	ENSXMAP00000018032	670 (aa)	-	M4AU87

Gene Model

Click here to download ENSXMAG00000018000's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018000	srp72	97	76.805	ENSG00000174780	SRP72	99	76.532	Homo_sapiens
ENSXMAG00000018000	srp72	99	79.104	ENSAPOG00000019438	srp72	99	80.180	Acanthochromis_polyacanthus
ENSXMAG00000018000	srp72	95	77.031	ENSAMEG00000008469	SRP72	100	76.558	Ailuropoda_melanoleuca
ENSXMAG00000018000	srp72	99	91.343	ENSACIG00000000488	srp72	100	91.654	Amphilophus_citrinellus
ENSXMAG00000018000	srp72	99	90.868	ENSAOCG00000011256	srp72	100	92.227	Amphiprion_ocellaris
ENSXMAG00000018000	srp72	99	91.467	ENSAPEG00000001512	srp72	100	91.779	Amphiprion_percula
ENSXMAG00000018000	srp72	91	92.007	ENSATEG00000006781	srp72	100	91.469	Anabas_testudineus
ENSXMAG00000018000	srp72	99	76.471	ENSAPLG00000008751	SRP72	98	76.551	Anas_platyrhynchos
ENSXMAG00000018000	srp72	99	76.426	ENSACAG00000002381	SRP72	98	76.006	Anolis_carolinensis
ENSXMAG00000018000	srp72	94	77.287	ENSANAG00000020836	-	93	77.512	Aotus_nancymaae
ENSXMAG00000018000	srp72	99	91.467	ENSACLG00000014617	srp72	100	91.779	Astatotilapia_calliptera
ENSXMAG00000018000	srp72	97	83.028	ENSAMXG00000004011	srp72	100	82.985	Astyanax_mexicanus
ENSXMAG00000018000	srp72	97	76.651	ENSBTAG00000010593	SRP72	99	76.383	Bos_taurus
ENSXMAG00000018000	srp72	97	76.190	ENSCJAG00000017998	SRP72	99	75.934	Callithrix_jacchus
ENSXMAG00000018000	srp72	97	76.959	ENSCAFG00000002244	SRP72	99	76.682	Canis_familiaris
ENSXMAG00000018000	srp72	97	76.959	ENSCAFG00020027338	SRP72	99	76.179	Canis_lupus_dingo
ENSXMAG00000018000	srp72	97	75.000	ENSCHIG00000021465	SRP72	99	74.776	Capra_hircus
ENSXMAG00000018000	srp72	96	76.863	ENSTSYG00000010571	-	100	76.179	Carlito_syrichta
ENSXMAG00000018000	srp72	85	56.966	ENSCAPG00000016668	SRP72	100	66.023	Cavia_aperea
ENSXMAG00000018000	srp72	97	76.498	ENSCPOG00000000218	SRP72	99	76.233	Cavia_porcellus
ENSXMAG00000018000	srp72	96	74.613	ENSCCAG00000030830	-	99	74.401	Cebus_capucinus
ENSXMAG00000018000	srp72	94	77.251	ENSCCAG00000030683	-	93	77.476	Cebus_capucinus
ENSXMAG00000018000	srp72	97	76.651	ENSCATG00000008072	SRP72	99	76.383	Cercocebus_atys
ENSXMAG00000018000	srp72	97	59.969	ENSCATG00000045359	-	95	60.736	Cercocebus_atys
ENSXMAG00000018000	srp72	97	76.344	ENSCLAG00000003571	SRP72	99	76.084	Chinchilla_lanigera
ENSXMAG00000018000	srp72	97	72.699	ENSCSAG00000005079	SRP72	99	72.537	Chlorocebus_sabaeus
ENSXMAG00000018000	srp72	90	76.068	ENSCHOG00000013240	SRP72	88	78.095	Choloepus_hoffmanni
ENSXMAG00000018000	srp72	98	77.121	ENSCPBG00000015015	SRP72	99	76.532	Chrysemys_picta_bellii
ENSXMAG00000018000	srp72	96	42.216	ENSCING00000002417	-	95	41.654	Ciona_intestinalis
ENSXMAG00000018000	srp72	92	42.700	ENSCSAVG00000011288	-	98	41.395	Ciona_savignyi
ENSXMAG00000018000	srp72	99	51.048	ENSCANG00000037920	-	98	51.903	Colobus_angolensis_palliatus
ENSXMAG00000018000	srp72	97	76.651	ENSCANG00000041709	SRP72	99	76.383	Colobus_angolensis_palliatus
ENSXMAG00000018000	srp72	99	76.190	ENSCGRG00001013548	Srp72	99	76.084	Cricetulus_griseus_chok1gshd
ENSXMAG00000018000	srp72	95	76.415	ENSCGRG00000003013	Srp72	99	76.415	Cricetulus_griseus_crigri
ENSXMAG00000018000	srp72	97	89.352	ENSCSEG00000003616	srp72	100	89.686	Cynoglossus_semilaevis
ENSXMAG00000018000	srp72	91	95.066	ENSCVAG00000001520	srp72	100	95.402	Cyprinodon_variegatus
ENSXMAG00000018000	srp72	85	81.579	ENSDARG00000014139	srp72	99	81.313	Danio_rerio
ENSXMAG00000018000	srp72	97	72.965	ENSDNOG00000039012	SRP72	83	72.929	Dasypus_novemcinctus
ENSXMAG00000018000	srp72	96	76.324	ENSDORG00000000171	Srp72	99	75.632	Dipodomys_ordii
ENSXMAG00000018000	srp72	95	39.535	FBgn0038810	Srp72	98	39.302	Drosophila_melanogaster
ENSXMAG00000018000	srp72	95	76.562	ENSETEG00000005191	SRP72	99	75.929	Echinops_telfairi
ENSXMAG00000018000	srp72	73	62.195	ENSEBUG00000003696	srp72	97	62.449	Eptatretus_burgeri
ENSXMAG00000018000	srp72	97	76.651	ENSEASG00005017747	SRP72	99	76.383	Equus_asinus_asinus
ENSXMAG00000018000	srp72	97	76.651	ENSECAG00000006920	SRP72	99	76.233	Equus_caballus
ENSXMAG00000018000	srp72	99	82.938	ENSELUG00000022415	srp72	100	83.061	Esox_lucius
ENSXMAG00000018000	srp72	96	76.708	ENSFCAG00000027600	SRP72	99	76.077	Felis_catus
ENSXMAG00000018000	srp72	95	78.594	ENSFALG00000006713	SRP72	99	77.910	Ficedula_albicollis
ENSXMAG00000018000	srp72	97	48.615	ENSFDAG00000009793	-	95	48.239	Fukomys_damarensis
ENSXMAG00000018000	srp72	97	76.344	ENSFDAG00000002014	-	99	75.934	Fukomys_damarensis
ENSXMAG00000018000	srp72	99	95.210	ENSFHEG00000017652	srp72	94	94.682	Fundulus_heteroclitus
ENSXMAG00000018000	srp72	98	79.331	ENSGMOG00000005986	srp72	99	79.495	Gadus_morhua
ENSXMAG00000018000	srp72	95	78.247	ENSGALG00000011403	SRP72	99	77.117	Gallus_gallus
ENSXMAG00000018000	srp72	99	98.496	ENSGAFG00000017762	srp72	100	98.503	Gambusia_affinis
ENSXMAG00000018000	srp72	99	87.294	ENSGACG00000016749	srp72	100	88.410	Gasterosteus_aculeatus
ENSXMAG00000018000	srp72	89	77.609	ENSGAGG00000024611	SRP72	98	77.609	Gopherus_agassizii
ENSXMAG00000018000	srp72	97	76.498	ENSGGOG00000013234	-	99	76.233	Gorilla_gorilla
ENSXMAG00000018000	srp72	99	91.617	ENSHBUG00000020723	srp72	100	91.928	Haplochromis_burtoni
ENSXMAG00000018000	srp72	97	59.784	ENSHGLG00000018597	-	99	59.821	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	97	71.692	ENSHGLG00000005029	-	99	71.450	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	90	67.717	ENSHGLG00000010633	-	99	68.684	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	51	58.892	ENSHGLG00000003496	-	99	58.908	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	85	70.614	ENSHGLG00000003950	-	97	70.222	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	97	76.344	ENSHGLG00000009791	SRP72	99	76.233	Heterocephalus_glaber_female
ENSXMAG00000018000	srp72	97	71.692	ENSHGLG00100011236	-	99	71.450	Heterocephalus_glaber_male
ENSXMAG00000018000	srp72	97	76.344	ENSHGLG00100009021	SRP72	99	76.233	Heterocephalus_glaber_male
ENSXMAG00000018000	srp72	91	58.987	ENSHGLG00100009346	-	99	58.185	Heterocephalus_glaber_male
ENSXMAG00000018000	srp72	85	70.175	ENSHGLG00100017133	-	97	69.778	Heterocephalus_glaber_male
ENSXMAG00000018000	srp72	97	88.208	ENSHCOG00000013760	srp72	100	88.640	Hippocampus_comes
ENSXMAG00000018000	srp72	99	82.563	ENSIPUG00000000210	srp72	100	82.687	Ictalurus_punctatus
ENSXMAG00000018000	srp72	97	76.651	ENSSTOG00000007305	SRP72	99	76.884	Ictidomys_tridecemlineatus
ENSXMAG00000018000	srp72	95	76.250	ENSJJAG00000018324	Srp72	97	75.969	Jaculus_jaculus
ENSXMAG00000018000	srp72	99	90.841	ENSKMAG00000003776	srp72	100	90.882	Kryptolebias_marmoratus
ENSXMAG00000018000	srp72	98	82.040	ENSLOCG00000002628	srp72	98	82.451	Lepisosteus_oculatus
ENSXMAG00000018000	srp72	97	76.498	ENSLAFG00000018307	SRP72	99	76.233	Loxodonta_africana
ENSXMAG00000018000	srp72	97	76.344	ENSMFAG00000031065	SRP72	99	76.383	Macaca_fascicularis
ENSXMAG00000018000	srp72	98	61.585	ENSMFAG00000037164	-	97	61.941	Macaca_fascicularis
ENSXMAG00000018000	srp72	98	76.024	ENSMMUG00000016368	SRP72	97	76.220	Macaca_mulatta
ENSXMAG00000018000	srp72	94	56.916	ENSMMUG00000021262	-	95	56.598	Macaca_mulatta
ENSXMAG00000018000	srp72	97	76.344	ENSMNEG00000038065	-	99	76.383	Macaca_nemestrina
ENSXMAG00000018000	srp72	94	76.183	ENSMLEG00000030140	-	93	75.917	Mandrillus_leucophaeus
ENSXMAG00000018000	srp72	99	91.617	ENSMAMG00000014989	srp72	89	91.667	Mastacembelus_armatus
ENSXMAG00000018000	srp72	99	91.617	ENSMZEG00005003325	srp72	100	91.928	Maylandia_zebra
ENSXMAG00000018000	srp72	92	74.188	ENSMGAG00000008567	SRP72	100	77.021	Meleagris_gallopavo
ENSXMAG00000018000	srp72	98	76.097	ENSMAUG00000001237	Srp72	99	75.483	Mesocricetus_auratus
ENSXMAG00000018000	srp72	94	76.814	ENSMICG00000008507	-	93	77.033	Microcebus_murinus
ENSXMAG00000018000	srp72	99	75.893	ENSMOCG00000020309	Srp72	99	75.785	Microtus_ochrogaster
ENSXMAG00000018000	srp72	99	89.104	ENSMMOG00000002627	srp72	100	89.238	Mola_mola
ENSXMAG00000018000	srp72	95	73.709	ENSMODG00000020697	SRP72	99	73.244	Monodelphis_domestica
ENSXMAG00000018000	srp72	99	90.419	ENSMALG00000003747	srp72	100	90.744	Monopterus_albus
ENSXMAG00000018000	srp72	99	75.744	MGP_CAROLIEiJ_G0027323	Srp72	99	75.635	Mus_caroli
ENSXMAG00000018000	srp72	99	75.744	ENSMUSG00000036323	Srp72	99	75.635	Mus_musculus
ENSXMAG00000018000	srp72	99	76.241	MGP_PahariEiJ_G0017103	Srp72	99	76.084	Mus_pahari
ENSXMAG00000018000	srp72	99	75.744	MGP_SPRETEiJ_G0028317	Srp72	99	75.635	Mus_spretus
ENSXMAG00000018000	srp72	95	77.031	ENSMPUG00000004828	SRP72	99	76.532	Mustela_putorius_furo
ENSXMAG00000018000	srp72	95	76.599	ENSMLUG00000007344	SRP72	99	76.119	Myotis_lucifugus
ENSXMAG00000018000	srp72	99	76.488	ENSNGAG00000012595	Srp72	100	76.374	Nannospalax_galili
ENSXMAG00000018000	srp72	99	87.575	ENSNBRG00000014492	srp72	100	87.444	Neolamprologus_brichardi
ENSXMAG00000018000	srp72	97	71.429	ENSNLEG00000008806	-	99	71.151	Nomascus_leucogenys
ENSXMAG00000018000	srp72	96	66.771	ENSMEUG00000005164	SRP72	90	74.141	Notamacropus_eugenii
ENSXMAG00000018000	srp72	95	75.938	ENSOPRG00000012521	SRP72	99	75.486	Ochotona_princeps
ENSXMAG00000018000	srp72	95	74.531	ENSODEG00000012214	SRP72	99	74.141	Octodon_degus
ENSXMAG00000018000	srp72	99	91.617	ENSONIG00000001446	srp72	99	91.518	Oreochromis_niloticus
ENSXMAG00000018000	srp72	96	62.328	ENSOANG00000008562	SRP72	99	61.898	Ornithorhynchus_anatinus
ENSXMAG00000018000	srp72	97	77.112	ENSOCUG00000012226	SRP72	99	76.682	Oryctolagus_cuniculus
ENSXMAG00000018000	srp72	99	86.527	ENSORLG00000020418	srp72	99	87.743	Oryzias_latipes
ENSXMAG00000018000	srp72	99	86.377	ENSORLG00020009138	srp72	98	85.778	Oryzias_latipes_hni
ENSXMAG00000018000	srp72	99	86.677	ENSORLG00015018251	srp72	99	87.892	Oryzias_latipes_hsok
ENSXMAG00000018000	srp72	98	87.176	ENSOMEG00000022008	srp72	98	88.485	Oryzias_melastigma
ENSXMAG00000018000	srp72	97	76.805	ENSOGAG00000003578	SRP72	99	77.015	Otolemur_garnettii
ENSXMAG00000018000	srp72	97	76.498	ENSOARG00000004329	SRP72	99	76.233	Ovis_aries
ENSXMAG00000018000	srp72	99	54.669	ENSPPAG00000011428	-	95	54.863	Pan_paniscus
ENSXMAG00000018000	srp72	80	61.754	ENSPPAG00000032490	-	91	61.667	Pan_paniscus
ENSXMAG00000018000	srp72	97	76.805	ENSPPAG00000042265	SRP72	99	76.532	Pan_paniscus
ENSXMAG00000018000	srp72	95	76.875	ENSPPRG00000015991	SRP72	99	76.383	Panthera_pardus
ENSXMAG00000018000	srp72	95	76.875	ENSPTIG00000018786	SRP72	99	76.383	Panthera_tigris_altaica
ENSXMAG00000018000	srp72	99	56.344	ENSPTRG00000048100	-	95	56.794	Pan_troglodytes
ENSXMAG00000018000	srp72	97	76.805	ENSPTRG00000048466	-	99	76.532	Pan_troglodytes
ENSXMAG00000018000	srp72	80	61.567	ENSPTRG00000043609	-	95	59.615	Pan_troglodytes
ENSXMAG00000018000	srp72	97	76.651	ENSPANG00000005495	SRP72	99	76.383	Papio_anubis
ENSXMAG00000018000	srp72	94	60.285	ENSPANG00000030230	-	97	61.526	Papio_anubis
ENSXMAG00000018000	srp72	96	77.294	ENSPSIG00000003003	SRP72	100	77.294	Pelodiscus_sinensis
ENSXMAG00000018000	srp72	98	76.097	ENSPEMG00000012828	-	99	75.785	Peromyscus_maniculatus_bairdii
ENSXMAG00000018000	srp72	96	76.672	ENSPCIG00000000732	SRP72	99	76.233	Phascolarctos_cinereus
ENSXMAG00000018000	srp72	99	98.045	ENSPFOG00000003480	srp72	100	98.054	Poecilia_formosa
ENSXMAG00000018000	srp72	99	98.045	ENSPLAG00000020122	srp72	100	98.054	Poecilia_latipinna
ENSXMAG00000018000	srp72	99	98.195	ENSPMEG00000019988	srp72	100	98.204	Poecilia_mexicana
ENSXMAG00000018000	srp72	99	97.594	ENSPREG00000006218	srp72	100	97.605	Poecilia_reticulata
ENSXMAG00000018000	srp72	57	62.402	ENSPPYG00000009152	-	97	62.725	Pongo_abelii
ENSXMAG00000018000	srp72	97	76.651	ENSPPYG00000014752	-	78	76.183	Pongo_abelii
ENSXMAG00000018000	srp72	97	75.115	ENSPVAG00000005590	SRP72	99	74.888	Pteropus_vampyrus
ENSXMAG00000018000	srp72	99	91.467	ENSPNYG00000001916	srp72	100	91.779	Pundamilia_nyererei
ENSXMAG00000018000	srp72	99	84.006	ENSPNAG00000022424	srp72	100	84.030	Pygocentrus_nattereri
ENSXMAG00000018000	srp72	99	73.958	ENSRNOG00000002100	LOC108348180	99	74.439	Rattus_norvegicus
ENSXMAG00000018000	srp72	99	58.859	ENSRBIG00000029328	-	98	59.450	Rhinopithecus_bieti
ENSXMAG00000018000	srp72	97	71.692	ENSRBIG00000042069	SRP72	99	71.557	Rhinopithecus_bieti
ENSXMAG00000018000	srp72	97	76.651	ENSRROG00000035704	SRP72	99	76.383	Rhinopithecus_roxellana
ENSXMAG00000018000	srp72	92	76.898	ENSSHAG00000000614	SRP72	99	73.997	Sarcophilus_harrisii
ENSXMAG00000018000	srp72	99	82.511	ENSSFOG00015002026	srp72	100	82.836	Scleropages_formosus
ENSXMAG00000018000	srp72	99	88.473	ENSSMAG00000007639	srp72	100	89.419	Scophthalmus_maximus
ENSXMAG00000018000	srp72	99	91.168	ENSSDUG00000007345	srp72	99	92.101	Seriola_dumerili
ENSXMAG00000018000	srp72	99	91.018	ENSSLDG00000021819	srp72	99	91.502	Seriola_lalandi_dorsalis
ENSXMAG00000018000	srp72	73	74.271	ENSSARG00000005804	SRP72	76	74.121	Sorex_araneus
ENSXMAG00000018000	srp72	96	77.259	ENSSPUG00000009740	SRP72	98	76.312	Sphenodon_punctatus
ENSXMAG00000018000	srp72	99	92.216	ENSSPAG00000011565	srp72	100	93.572	Stegastes_partitus
ENSXMAG00000018000	srp72	99	74.286	ENSSSCG00000008900	SRP72	99	73.848	Sus_scrofa
ENSXMAG00000018000	srp72	95	78.159	ENSTGUG00000004767	SRP72	99	77.347	Taeniopygia_guttata
ENSXMAG00000018000	srp72	97	86.830	ENSTRUG00000009831	srp72	100	87.294	Takifugu_rubripes
ENSXMAG00000018000	srp72	99	89.474	ENSTNIG00000013073	srp72	99	89.137	Tetraodon_nigroviridis
ENSXMAG00000018000	srp72	97	55.300	ENSTBEG00000007394	SRP72	99	55.605	Tupaia_belangeri
ENSXMAG00000018000	srp72	92	76.260	ENSTTRG00000010945	SRP72	100	76.101	Tursiops_truncatus
ENSXMAG00000018000	srp72	57	76.903	ENSUAMG00000001701	SRP72	99	77.193	Ursus_americanus
ENSXMAG00000018000	srp72	95	76.875	ENSUMAG00000008151	SRP72	99	76.383	Ursus_maritimus
ENSXMAG00000018000	srp72	97	75.269	ENSVPAG00000000458	SRP72	99	75.336	Vicugna_pacos
ENSXMAG00000018000	srp72	97	76.805	ENSVVUG00000006020	SRP72	99	76.532	Vulpes_vulpes
ENSXMAG00000018000	srp72	95	73.155	ENSXETG00000010205	srp72	100	73.155	Xenopus_tropicalis