EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000018237 (Gene tree)
Gene ID
102220933
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
32177 bases
Position
chr20:25180104-25212280
Accession
102220933
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000032365RRM_1PF00076.226.7e-3412
ENSXMAP00000032365RRM_1PF00076.226.7e-3422
ENSXMAP00000018296RRM_1PF00076.227.2e-3412
ENSXMAP00000018296RRM_1PF00076.227.2e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000025665-1032-ENSXMAP00000032365343 (aa)--
ENSXMAT00000018323-4055XM_005797941ENSXMAP00000018296348 (aa)XP_005797998M4AV01
Gene Model
Click here to download ENSXMAG00000018237's gene model file
Pathways
Pathway IDPathway NameSource
xma03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018237's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000018237-10083.516ENSG00000135097MSI19986.207Homo_sapiens
ENSXMAG00000018237-10091.453ENSAPOG00000023458-10091.453Acanthochromis_polyacanthus
ENSXMAG00000018237-10098.567ENSAPOG00000003191MSI110098.567Acanthochromis_polyacanthus
ENSXMAG00000018237-9464.042ENSAMEG00000013302MSI18392.308Ailuropoda_melanoleuca
ENSXMAG00000018237-8697.183ENSACIG00000017754-8687.356Amphilophus_citrinellus
ENSXMAG00000018237-10098.567ENSAOCG00000003804MSI110098.567Amphiprion_ocellaris
ENSXMAG00000018237-9483.742ENSAOCG00000009031-9886.207Amphiprion_ocellaris
ENSXMAG00000018237-10098.567ENSAPEG00000003245MSI110098.567Amphiprion_percula
ENSXMAG00000018237-10091.453ENSAPEG00000006857-8491.453Amphiprion_percula
ENSXMAG00000018237-10087.115ENSATEG00000017059MSI110087.115Anabas_testudineus
ENSXMAG00000018237-10090.368ENSATEG00000023779-10090.368Anabas_testudineus
ENSXMAG00000018237-10083.149ENSACAG00000002762MSI110083.978Anolis_carolinensis
ENSXMAG00000018237-10083.516ENSANAG00000027151MSI110083.516Aotus_nancymaae
ENSXMAG00000018237-8282.986ENSANAG00000027901-8882.986Aotus_nancymaae
ENSXMAG00000018237-10091.714ENSACLG00000000117-10092.661Astatotilapia_calliptera
ENSXMAG00000018237-10097.151ENSACLG00000011230MSI110097.151Astatotilapia_calliptera
ENSXMAG00000018237-9488.715ENSAMXG00000038960msi17688.715Astyanax_mexicanus
ENSXMAG00000018237-10083.516ENSBTAG00000009800MSI110087.578Bos_taurus
ENSXMAG00000018237-10083.516ENSCJAG00000008578MSI110083.516Callithrix_jacchus
ENSXMAG00000018237-10083.242ENSCAFG00000010283MSI110083.242Canis_familiaris
ENSXMAG00000018237-9485.209ENSCAFG00020020585MSI110085.209Canis_lupus_dingo
ENSXMAG00000018237-10082.114ENSCHIG00000024304MSI110082.114Capra_hircus
ENSXMAG00000018237-9485.015ENSTSYG00000033949MSI19585.015Carlito_syrichta
ENSXMAG00000018237-9484.982ENSCAPG00000003919MSI17884.982Cavia_aperea
ENSXMAG00000018237-9485.673ENSCPOG00000012361MSI110085.673Cavia_porcellus
ENSXMAG00000018237-10083.516ENSCCAG00000035567MSI110083.516Cebus_capucinus
ENSXMAG00000018237-10083.516ENSCATG00000030019MSI110083.516Cercocebus_atys
ENSXMAG00000018237-9485.673ENSCLAG00000011329MSI110085.673Chinchilla_lanigera
ENSXMAG00000018237-7882.437ENSCSAG00000002265MSI19682.437Chlorocebus_sabaeus
ENSXMAG00000018237-10086.402ENSCPBG00000011349MSI110086.402Chrysemys_picta_bellii
ENSXMAG00000018237-9485.061ENSCANG00000040651MSI110085.061Colobus_angolensis_palliatus
ENSXMAG00000018237-10083.516ENSCGRG00001018883Msi110083.516Cricetulus_griseus_chok1gshd
ENSXMAG00000018237-9485.106ENSCGRG00000002191Msi17285.106Cricetulus_griseus_crigri
ENSXMAG00000018237-9088.599ENSCSEG00000011032MSI110088.599Cynoglossus_semilaevis
ENSXMAG00000018237-10090.286ENSCSEG00000008352-10090.286Cynoglossus_semilaevis
ENSXMAG00000018237-10097.429ENSCSEG00000005834-10097.429Cynoglossus_semilaevis
ENSXMAG00000018237-7681.019ENSCVAG00000017463-8981.019Cyprinodon_variegatus
ENSXMAG00000018237-5174.627ENSCVAG00000017430zgc:1107969474.627Cyprinodon_variegatus
ENSXMAG00000018237-10092.000ENSCVAG00000009100MSI110092.000Cyprinodon_variegatus
ENSXMAG00000018237-7990.233ENSDARG00000102015CABZ01037298.19890.233Danio_rerio
ENSXMAG00000018237-9089.865ENSDARG00000010710msi110091.589Danio_rerio
ENSXMAG00000018237-9481.962ENSDNOG00000005713MSI19181.962Dasypus_novemcinctus
ENSXMAG00000018237-9484.431ENSDORG00000005610Msi19484.431Dipodomys_ordii
ENSXMAG00000018237-9482.622ENSETEG00000004756MSI110082.622Echinops_telfairi
ENSXMAG00000018237-10083.516ENSEASG00005004736MSI19887.616Equus_asinus_asinus
ENSXMAG00000018237-10083.516ENSECAG00000017526MSI110083.516Equus_caballus
ENSXMAG00000018237-9486.810ENSELUG00000023280-10087.812Esox_lucius
ENSXMAG00000018237-9485.100ENSELUG00000023219MSI19285.100Esox_lucius
ENSXMAG00000018237-10083.516ENSFCAG00000011007MSI110083.516Felis_catus
ENSXMAG00000018237-9488.333ENSFALG00000007574MSI110088.333Ficedula_albicollis
ENSXMAG00000018237-9484.756ENSFDAG00000019586MSI110084.756Fukomys_damarensis
ENSXMAG00000018237-10091.738ENSFHEG00000022446MSI110091.738Fundulus_heteroclitus
ENSXMAG00000018237-10098.571ENSFHEG00000003560-10098.571Fundulus_heteroclitus
ENSXMAG00000018237-10085.876ENSGMOG00000017838-10085.876Gadus_morhua
ENSXMAG00000018237-10090.805ENSGMOG00000001006MSI19990.805Gadus_morhua
ENSXMAG00000018237-9488.550ENSGALG00000007227MSI19677.273Gallus_gallus
ENSXMAG00000018237-9499.693ENSGAFG00000021522MSI19499.693Gambusia_affinis
ENSXMAG00000018237-10069.688ENSGAFG00000005860-10069.688Gambusia_affinis
ENSXMAG00000018237-10089.744ENSGACG00000012679MSI110089.744Gasterosteus_aculeatus
ENSXMAG00000018237-10087.879ENSGACG00000008674-10087.879Gasterosteus_aculeatus
ENSXMAG00000018237-10086.119ENSGAGG00000016037MSI110086.119Gopherus_agassizii
ENSXMAG00000018237-9485.032ENSGGOG00000010328MSI110085.032Gorilla_gorilla
ENSXMAG00000018237-10097.151ENSHBUG00000021921MSI110097.151Haplochromis_burtoni
ENSXMAG00000018237-10091.714ENSHBUG00000011841-10091.714Haplochromis_burtoni
ENSXMAG00000018237-10083.242ENSHGLG00000012782MSI110083.242Heterocephalus_glaber_female
ENSXMAG00000018237-9484.756ENSHGLG00100016848MSI110084.756Heterocephalus_glaber_male
ENSXMAG00000018237-9096.417ENSHCOG00000012019MSI110096.417Hippocampus_comes
ENSXMAG00000018237-10086.723ENSHCOG00000012067-10086.723Hippocampus_comes
ENSXMAG00000018237-10087.464ENSIPUG00000001976msi110087.464Ictalurus_punctatus
ENSXMAG00000018237-9485.209ENSSTOG00000009799MSI110085.209Ictidomys_tridecemlineatus
ENSXMAG00000018237-10073.851ENSJJAG00000010643-10073.851Jaculus_jaculus
ENSXMAG00000018237-10083.516ENSJJAG00000010463Msi110083.516Jaculus_jaculus
ENSXMAG00000018237-10091.977ENSKMAG00000011251MSI110091.977Kryptolebias_marmoratus
ENSXMAG00000018237-9099.023ENSKMAG00000019877-10099.023Kryptolebias_marmoratus
ENSXMAG00000018237-10098.000ENSLBEG00000001375-10098.000Labrus_bergylta
ENSXMAG00000018237-10091.738ENSLBEG00000008789MSI110091.738Labrus_bergylta
ENSXMAG00000018237-9482.849ENSLACG00000018287MSI110082.849Latimeria_chalumnae
ENSXMAG00000018237-5376.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSXMAG00000018237-9076.133ENSLAFG00000009412MSI110078.689Loxodonta_africana
ENSXMAG00000018237-9485.673ENSMFAG00000001798MSI110085.673Macaca_fascicularis
ENSXMAG00000018237-9485.673ENSMMUG00000031527MSI19684.770Macaca_mulatta
ENSXMAG00000018237-10083.516ENSMNEG00000040034MSI19887.616Macaca_nemestrina
ENSXMAG00000018237-9485.061ENSMLEG00000003921MSI110085.061Mandrillus_leucophaeus
ENSXMAG00000018237-10098.276ENSMAMG00000018426-10098.276Mastacembelus_armatus
ENSXMAG00000018237-10091.404ENSMAMG00000002279MSI110091.404Mastacembelus_armatus
ENSXMAG00000018237-10091.714ENSMZEG00005000340-10091.714Maylandia_zebra
ENSXMAG00000018237-10097.151ENSMZEG00005026892MSI110097.151Maylandia_zebra
ENSXMAG00000018237-6492.308ENSMGAG00000016518-10092.308Meleagris_gallopavo
ENSXMAG00000018237-7088.843ENSMAUG00000016820Msi19988.843Mesocricetus_auratus
ENSXMAG00000018237-10083.516ENSMICG00000033181MSI110083.516Microcebus_murinus
ENSXMAG00000018237-10083.242ENSMOCG00000002286Msi110083.242Microtus_ochrogaster
ENSXMAG00000018237-10085.960ENSMMOG00000012265-9995.710Mola_mola
ENSXMAG00000018237-9285.266ENSMMOG00000010492MSI19785.266Mola_mola
ENSXMAG00000018237-9059.639ENSMODG00000003189-10059.036Monodelphis_domestica
ENSXMAG00000018237-9497.846ENSMALG00000001426-10098.039Monopterus_albus
ENSXMAG00000018237-10091.714ENSMALG00000017889MSI110091.714Monopterus_albus
ENSXMAG00000018237-10082.967MGP_CAROLIEiJ_G0027626Msi19888.973Mus_caroli
ENSXMAG00000018237-10082.967ENSMUSG00000054256Msi19888.973Mus_musculus
ENSXMAG00000018237-10085.795MGP_PahariEiJ_G0024206Msi19889.313Mus_pahari
ENSXMAG00000018237-10082.967MGP_SPRETEiJ_G0028624Msi19888.973Mus_spretus
ENSXMAG00000018237-9485.209ENSMPUG00000003168MSI110085.209Mustela_putorius_furo
ENSXMAG00000018237-9476.190ENSMLUG00000010313MSI110076.190Myotis_lucifugus
ENSXMAG00000018237-9485.106ENSNGAG00000014508Msi19185.106Nannospalax_galili
ENSXMAG00000018237-8888.115ENSNBRG00000018012MSI19988.115Neolamprologus_brichardi
ENSXMAG00000018237-10091.714ENSNBRG00000000841-10091.714Neolamprologus_brichardi
ENSXMAG00000018237-9075.305ENSNLEG00000015636MSI110075.305Nomascus_leucogenys
ENSXMAG00000018237-9465.854ENSMEUG00000015759MSI110065.854Notamacropus_eugenii
ENSXMAG00000018237-9077.460ENSOPRG00000016879MSI110077.460Ochotona_princeps
ENSXMAG00000018237-9485.061ENSODEG00000006328MSI110085.061Octodon_degus
ENSXMAG00000018237-10093.956ENSONIG00000019452-10093.956Oreochromis_niloticus
ENSXMAG00000018237-10091.714ENSONIG00000011182MSI110091.714Oreochromis_niloticus
ENSXMAG00000018237-9485.531ENSOCUG00000027716MSI110085.531Oryctolagus_cuniculus
ENSXMAG00000018237-10098.567ENSORLG00000029593MSI110098.567Oryzias_latipes
ENSXMAG00000018237-10091.168ENSORLG00000019978-10091.168Oryzias_latipes
ENSXMAG00000018237-10091.168ENSORLG00020001208-7191.168Oryzias_latipes_hni
ENSXMAG00000018237-10098.567ENSORLG00020008266MSI110098.107Oryzias_latipes_hni
ENSXMAG00000018237-10098.567ENSORLG00015003916MSI110098.567Oryzias_latipes_hsok
ENSXMAG00000018237-10091.168ENSORLG00015013672-7192.581Oryzias_latipes_hsok
ENSXMAG00000018237-10098.281ENSOMEG00000002272-10098.281Oryzias_melastigma
ENSXMAG00000018237-10091.453ENSOMEG00000017536MSI110091.453Oryzias_melastigma
ENSXMAG00000018237-9981.868ENSOGAG00000003847MSI19981.868Otolemur_garnettii
ENSXMAG00000018237-9482.727ENSOARG00000012097MSI110082.727Ovis_aries
ENSXMAG00000018237-9485.061ENSPPAG00000043073MSI110085.061Pan_paniscus
ENSXMAG00000018237-10083.516ENSPPRG00000000370MSI110083.516Panthera_pardus
ENSXMAG00000018237-9485.209ENSPTIG00000008913MSI110085.209Panthera_tigris_altaica
ENSXMAG00000018237-10083.516ENSPTRG00000005531MSI110083.516Pan_troglodytes
ENSXMAG00000018237-10083.242ENSPANG00000006335MSI110083.242Papio_anubis
ENSXMAG00000018237-10090.286ENSPKIG00000023575-10090.286Paramormyrops_kingsleyae
ENSXMAG00000018237-10093.429ENSPKIG00000016497MSI110093.429Paramormyrops_kingsleyae
ENSXMAG00000018237-7980.702ENSPSIG00000009621-10081.140Pelodiscus_sinensis
ENSXMAG00000018237-9486.810ENSPSIG00000011608-9386.810Pelodiscus_sinensis
ENSXMAG00000018237-9476.829ENSPMGG00000007743-9871.387Periophthalmus_magnuspinnatus
ENSXMAG00000018237-8692.230ENSPMGG00000000514MSI19792.230Periophthalmus_magnuspinnatus
ENSXMAG00000018237-9483.680ENSPEMG00000010491Msi19583.680Peromyscus_maniculatus_bairdii
ENSXMAG00000018237-10091.453ENSPFOG00000013113MSI110091.453Poecilia_formosa
ENSXMAG00000018237-10099.143ENSPFOG00000008319-8699.143Poecilia_formosa
ENSXMAG00000018237-10099.143ENSPLAG00000012431-9799.143Poecilia_latipinna
ENSXMAG00000018237-10091.453ENSPLAG00000014025-10091.453Poecilia_latipinna
ENSXMAG00000018237-10099.713ENSPMEG00000007025-9993.072Poecilia_mexicana
ENSXMAG00000018237-10091.453ENSPMEG00000012796MSI110091.453Poecilia_mexicana
ENSXMAG00000018237-7186.634ENSPREG00000014574-10086.634Poecilia_reticulata
ENSXMAG00000018237-9096.104ENSPREG00000021416-9496.104Poecilia_reticulata
ENSXMAG00000018237-10082.692ENSPPYG00000005027MSI110082.692Pongo_abelii
ENSXMAG00000018237-7687.817ENSPCAG00000002300MSI17287.817Procavia_capensis
ENSXMAG00000018237-10083.516ENSPCOG00000017341MSI110083.516Propithecus_coquereli
ENSXMAG00000018237-9469.207ENSPVAG00000002225MSI110069.207Pteropus_vampyrus
ENSXMAG00000018237-10091.714ENSPNYG00000002529-10091.714Pundamilia_nyererei
ENSXMAG00000018237-10097.151ENSPNYG00000004379MSI110097.151Pundamilia_nyererei
ENSXMAG00000018237-10088.034ENSPNAG00000019337msi110088.034Pygocentrus_nattereri
ENSXMAG00000018237-9484.887ENSRNOG00000001156Msi110084.887Rattus_norvegicus
ENSXMAG00000018237-9485.209ENSRBIG00000036889MSI110085.209Rhinopithecus_bieti
ENSXMAG00000018237-9484.848ENSRROG00000041076MSI19384.848Rhinopithecus_roxellana
ENSXMAG00000018237-9485.673ENSSBOG00000030259MSI19985.673Saimiri_boliviensis_boliviensis
ENSXMAG00000018237-9474.510ENSSHAG00000006834MSI110074.510Sarcophilus_harrisii
ENSXMAG00000018237-9492.145ENSSFOG00015005350MSI110092.880Scleropages_formosus
ENSXMAG00000018237-9495.122ENSSFOG00015014964-9595.122Scleropages_formosus
ENSXMAG00000018237-9496.935ENSSMAG00000009156-7396.535Scophthalmus_maximus
ENSXMAG00000018237-9091.919ENSSMAG00000018824MSI19891.000Scophthalmus_maximus
ENSXMAG00000018237-10098.286ENSSDUG00000022697-10098.286Seriola_dumerili
ENSXMAG00000018237-10091.453ENSSDUG00000001027MSI110091.453Seriola_dumerili
ENSXMAG00000018237-10091.453ENSSLDG00000016832MSI110091.453Seriola_lalandi_dorsalis
ENSXMAG00000018237-10082.967ENSSLDG00000018706-9991.509Seriola_lalandi_dorsalis
ENSXMAG00000018237-10086.119ENSSPUG00000015741MSI110086.119Sphenodon_punctatus
ENSXMAG00000018237-7182.540ENSSPAG00000014085-10082.540Stegastes_partitus
ENSXMAG00000018237-9498.171ENSSPAG00000013098-10098.171Stegastes_partitus
ENSXMAG00000018237-5580.247ENSSPAG00000015573zgc:1107968280.247Stegastes_partitus
ENSXMAG00000018237-10083.242ENSSSCG00000029365MSI19887.307Sus_scrofa
ENSXMAG00000018237-9486.176ENSTGUG00000009534MSI110086.176Taeniopygia_guttata
ENSXMAG00000018237-9091.497ENSTRUG00000015636-7991.497Takifugu_rubripes
ENSXMAG00000018237-5181.818ENSTRUG00000021586-9981.818Takifugu_rubripes
ENSXMAG00000018237-8189.401ENSTRUG00000016249MSI110080.632Takifugu_rubripes
ENSXMAG00000018237-10087.464ENSTNIG00000011469MSI110087.464Tetraodon_nigroviridis
ENSXMAG00000018237-9666.176ENSTNIG00000019814-9766.176Tetraodon_nigroviridis
ENSXMAG00000018237-9476.923ENSTBEG00000007182MSI110075.445Tupaia_belangeri
ENSXMAG00000018237-7687.594ENSTTRG00000005663MSI17887.594Tursiops_truncatus
ENSXMAG00000018237-7187.500ENSUAMG00000015514MSI19487.500Ursus_americanus
ENSXMAG00000018237-9482.085ENSUMAG00000006176MSI18883.221Ursus_maritimus
ENSXMAG00000018237-9485.106ENSVVUG00000020993MSI110084.384Vulpes_vulpes
ENSXMAG00000018237-10083.954ENSXETG00000012216msi110083.954Xenopus_tropicalis
ENSXMAG00000018237-10088.338ENSXCOG00000017605MSI110088.338Xiphophorus_couchianus
ENSXMAG00000018237-10092.000ENSXMAG00000027103MSI110079.832Xiphophorus_maculatus

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