EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018241 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5310 bases
Position: chr22:20210754-20216063
Accession: 102233663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018278	zf-C2H2	PF00096.26	2.2e-12	1	3
ENSXMAP00000018278	zf-C2H2	PF00096.26	2.2e-12	2	3
ENSXMAP00000018278	zf-C2H2	PF00096.26	2.2e-12	3	3
ENSXMAP00000018278	zf-met	PF12874.7	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018305	-	1527	XM_023327644	ENSXMAP00000018278	508 (aa)	XP_023183412	M4AUY3

Gene Model

Click here to download ENSXMAG00000018241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018241	zbtb18	99	83.449	ENSAPOG00000005168	zbtb18	99	83.449	Acanthochromis_polyacanthus
ENSXMAG00000018241	zbtb18	99	87.146	ENSACIG00000008655	zbtb18	99	87.146	Amphilophus_citrinellus
ENSXMAG00000018241	zbtb18	99	83.624	ENSAOCG00000014105	zbtb18	99	83.624	Amphiprion_ocellaris
ENSXMAG00000018241	zbtb18	99	83.189	ENSAPEG00000003817	zbtb18	78	83.189	Amphiprion_percula
ENSXMAG00000018241	zbtb18	99	83.538	ENSATEG00000010192	zbtb18	99	83.538	Anabas_testudineus
ENSXMAG00000018241	zbtb18	99	83.187	ENSACLG00000022978	zbtb18	98	83.187	Astatotilapia_calliptera
ENSXMAG00000018241	zbtb18	99	71.403	ENSAMXG00000042119	zbtb18	99	71.739	Astyanax_mexicanus
ENSXMAG00000018241	zbtb18	99	80.736	ENSCSEG00000003083	zbtb18	99	80.736	Cynoglossus_semilaevis
ENSXMAG00000018241	zbtb18	99	84.764	ENSCVAG00000016785	zbtb18	99	84.764	Cyprinodon_variegatus
ENSXMAG00000018241	zbtb18	99	71.818	ENSDARG00000028228	zbtb18	100	72.395	Danio_rerio
ENSXMAG00000018241	zbtb18	99	72.143	ENSELUG00000013471	zbtb18	99	72.143	Esox_lucius
ENSXMAG00000018241	zbtb18	99	84.790	ENSFHEG00000020005	zbtb18	99	84.790	Fundulus_heteroclitus
ENSXMAG00000018241	zbtb18	64	94.697	ENSGMOG00000018718	zbtb18	59	91.192	Gadus_morhua
ENSXMAG00000018241	zbtb18	99	88.204	ENSGAFG00000000619	zbtb18	99	88.204	Gambusia_affinis
ENSXMAG00000018241	zbtb18	100	82.500	ENSGACG00000010518	zbtb18	97	82.679	Gasterosteus_aculeatus
ENSXMAG00000018241	zbtb18	99	83.187	ENSHBUG00000013654	zbtb18	99	83.187	Haplochromis_burtoni
ENSXMAG00000018241	zbtb18	69	82.723	ENSHCOG00000002345	zbtb18	94	82.723	Hippocampus_comes
ENSXMAG00000018241	zbtb18	99	66.851	ENSIPUG00000008912	zbtb18	99	68.704	Ictalurus_punctatus
ENSXMAG00000018241	zbtb18	99	83.888	ENSKMAG00000002780	zbtb18	99	83.888	Kryptolebias_marmoratus
ENSXMAG00000018241	zbtb18	99	81.930	ENSLBEG00000014796	zbtb18	99	81.930	Labrus_bergylta
ENSXMAG00000018241	zbtb18	83	61.438	ENSMFAG00000033326	ZBTB18	99	61.438	Macaca_fascicularis
ENSXMAG00000018241	zbtb18	83	61.739	ENSMMUG00000015664	ZBTB18	100	61.674	Macaca_mulatta
ENSXMAG00000018241	zbtb18	99	83.888	ENSMAMG00000021720	zbtb18	99	83.888	Mastacembelus_armatus
ENSXMAG00000018241	zbtb18	99	83.187	ENSMZEG00005027394	zbtb18	99	83.187	Maylandia_zebra
ENSXMAG00000018241	zbtb18	94	54.268	ENSMGAG00000015389	-	100	54.675	Meleagris_gallopavo
ENSXMAG00000018241	zbtb18	99	88.000	ENSMMOG00000007888	zbtb18	99	88.000	Mola_mola
ENSXMAG00000018241	zbtb18	99	83.774	ENSMALG00000000725	zbtb18	99	83.774	Monopterus_albus
ENSXMAG00000018241	zbtb18	99	83.216	ENSNBRG00000013796	zbtb18	100	83.216	Neolamprologus_brichardi
ENSXMAG00000018241	zbtb18	99	83.538	ENSONIG00000000862	zbtb18	99	83.538	Oreochromis_niloticus
ENSXMAG00000018241	zbtb18	99	83.012	ENSORLG00000027425	zbtb18	98	83.012	Oryzias_latipes
ENSXMAG00000018241	zbtb18	99	83.187	ENSORLG00020011988	zbtb18	98	83.187	Oryzias_latipes_hni
ENSXMAG00000018241	zbtb18	99	83.187	ENSORLG00015017457	zbtb18	98	83.187	Oryzias_latipes_hsok
ENSXMAG00000018241	zbtb18	99	83.713	ENSOMEG00000011249	zbtb18	98	83.713	Oryzias_melastigma
ENSXMAG00000018241	zbtb18	99	57.356	ENSPKIG00000008787	-	100	57.356	Paramormyrops_kingsleyae
ENSXMAG00000018241	zbtb18	99	70.270	ENSPKIG00000021964	zbtb18	96	70.270	Paramormyrops_kingsleyae
ENSXMAG00000018241	zbtb18	99	84.483	ENSPMGG00000008020	zbtb18	100	84.483	Periophthalmus_magnuspinnatus
ENSXMAG00000018241	zbtb18	99	87.567	ENSPFOG00000022080	zbtb18	100	87.567	Poecilia_formosa
ENSXMAG00000018241	zbtb18	99	95.585	ENSPLAG00000011299	-	100	95.585	Poecilia_latipinna
ENSXMAG00000018241	zbtb18	99	95.585	ENSPLAG00000020960	zbtb18	100	95.585	Poecilia_latipinna
ENSXMAG00000018241	zbtb18	99	88.455	ENSPMEG00000007554	zbtb18	100	88.455	Poecilia_mexicana
ENSXMAG00000018241	zbtb18	99	88.556	ENSPREG00000008576	zbtb18	99	88.556	Poecilia_reticulata
ENSXMAG00000018241	zbtb18	99	83.187	ENSPNYG00000001530	zbtb18	99	83.187	Pundamilia_nyererei
ENSXMAG00000018241	zbtb18	87	68.367	ENSPNAG00000014066	zbtb18	89	68.247	Pygocentrus_nattereri
ENSXMAG00000018241	zbtb18	99	82.709	ENSSMAG00000018041	zbtb18	100	82.709	Scophthalmus_maximus
ENSXMAG00000018241	zbtb18	99	83.922	ENSSDUG00000018660	zbtb18	100	83.746	Seriola_dumerili
ENSXMAG00000018241	zbtb18	99	83.922	ENSSLDG00000022573	zbtb18	100	83.746	Seriola_lalandi_dorsalis
ENSXMAG00000018241	zbtb18	94	52.988	ENSSPUG00000010554	-	100	53.187	Sphenodon_punctatus
ENSXMAG00000018241	zbtb18	99	83.713	ENSSPAG00000002691	zbtb18	99	83.713	Stegastes_partitus
ENSXMAG00000018241	zbtb18	99	81.802	ENSTRUG00000020604	zbtb18	100	81.802	Takifugu_rubripes
ENSXMAG00000018241	zbtb18	99	82.657	ENSTNIG00000000430	zbtb18	99	83.579	Tetraodon_nigroviridis
ENSXMAG00000018241	zbtb18	99	92.235	ENSXCOG00000013308	zbtb18	100	92.235	Xiphophorus_couchianus