EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018253 (Gene tree)
Gene ID: 102224591
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11244 bases
Position: chr23:5067881-5079124
Accession: 102224591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018313	MIF4G_like	PF09088.11	2.1e-37	1	1
ENSXMAP00000018313	MIF4G_like_2	PF09090.11	3.7e-87	1	1
ENSXMAP00000018313	MIF4G	PF02854.19	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018340	NCBP1-201	3465	XM_005807789	ENSXMAP00000018313	796 (aa)	XP_005807846	M4AV18

Gene Model

Click here to download ENSXMAG00000018253's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03015	mRNA surveillance pathway	KEGG
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018253	NCBP1	99	82.264	ENSG00000136937	NCBP1	99	82.642	Homo_sapiens
ENSXMAG00000018253	NCBP1	100	96.106	ENSAPOG00000008002	NCBP1	100	96.106	Acanthochromis_polyacanthus
ENSXMAG00000018253	NCBP1	99	82.434	ENSAMEG00000004763	NCBP1	99	82.811	Ailuropoda_melanoleuca
ENSXMAG00000018253	NCBP1	100	95.854	ENSACIG00000000274	NCBP1	100	95.854	Amphilophus_citrinellus
ENSXMAG00000018253	NCBP1	100	95.729	ENSAOCG00000021148	NCBP1	100	95.729	Amphiprion_ocellaris
ENSXMAG00000018253	NCBP1	100	95.729	ENSAPEG00000001701	NCBP1	100	95.729	Amphiprion_percula
ENSXMAG00000018253	NCBP1	100	95.980	ENSATEG00000006929	NCBP1	100	95.980	Anabas_testudineus
ENSXMAG00000018253	NCBP1	95	82.654	ENSAPLG00000016318	NCBP1	99	82.917	Anas_platyrhynchos
ENSXMAG00000018253	NCBP1	99	83.021	ENSACAG00000004409	NCBP1	87	83.146	Anolis_carolinensis
ENSXMAG00000018253	NCBP1	99	80.252	ENSANAG00000025744	NCBP1	99	82.094	Aotus_nancymaae
ENSXMAG00000018253	NCBP1	100	95.477	ENSACLG00000014812	NCBP1	100	95.477	Astatotilapia_calliptera
ENSXMAG00000018253	NCBP1	100	91.092	ENSAMXG00000016364	NCBP1	100	91.092	Astyanax_mexicanus
ENSXMAG00000018253	NCBP1	99	82.390	ENSBTAG00000009732	NCBP1	99	87.311	Bos_taurus
ENSXMAG00000018253	NCBP1	100	35.916	WBGene00018156	ncbp-1	100	35.793	Caenorhabditis_elegans
ENSXMAG00000018253	NCBP1	99	82.390	ENSCJAG00000010840	NCBP1	99	85.952	Callithrix_jacchus
ENSXMAG00000018253	NCBP1	99	82.516	ENSCAFG00000002445	NCBP1	99	82.893	Canis_familiaris
ENSXMAG00000018253	NCBP1	98	82.248	ENSCAFG00020017997	NCBP1	96	88.060	Canis_lupus_dingo
ENSXMAG00000018253	NCBP1	99	82.264	ENSCHIG00000020139	NCBP1	99	82.642	Capra_hircus
ENSXMAG00000018253	NCBP1	51	87.562	ENSTSYG00000011914	NCBP1	98	86.520	Carlito_syrichta
ENSXMAG00000018253	NCBP1	81	74.652	ENSCAPG00000014252	NCBP1	90	74.498	Cavia_aperea
ENSXMAG00000018253	NCBP1	95	81.662	ENSCPOG00000012573	NCBP1	98	82.058	Cavia_porcellus
ENSXMAG00000018253	NCBP1	99	82.264	ENSCCAG00000032297	NCBP1	99	82.642	Cebus_capucinus
ENSXMAG00000018253	NCBP1	99	82.264	ENSCATG00000010052	NCBP1	99	82.642	Cercocebus_atys
ENSXMAG00000018253	NCBP1	99	82.264	ENSCLAG00000014339	NCBP1	99	82.642	Chinchilla_lanigera
ENSXMAG00000018253	NCBP1	99	82.264	ENSCSAG00000010929	NCBP1	99	82.642	Chlorocebus_sabaeus
ENSXMAG00000018253	NCBP1	89	81.132	ENSCHOG00000010332	NCBP1	91	75.630	Choloepus_hoffmanni
ENSXMAG00000018253	NCBP1	99	81.132	ENSCPBG00000024344	NCBP1	99	83.196	Chrysemys_picta_bellii
ENSXMAG00000018253	NCBP1	99	54.214	ENSCING00000008990	-	99	54.088	Ciona_intestinalis
ENSXMAG00000018253	NCBP1	99	53.558	ENSCSAVG00000005300	-	99	52.821	Ciona_savignyi
ENSXMAG00000018253	NCBP1	99	82.264	ENSCANG00000036913	NCBP1	99	82.642	Colobus_angolensis_palliatus
ENSXMAG00000018253	NCBP1	99	82.013	ENSCGRG00001015771	Ncbp1	99	82.390	Cricetulus_griseus_chok1gshd
ENSXMAG00000018253	NCBP1	99	81.911	ENSCGRG00000010311	Ncbp1	99	82.293	Cricetulus_griseus_crigri
ENSXMAG00000018253	NCBP1	100	94.849	ENSCSEG00000012377	NCBP1	100	94.849	Cynoglossus_semilaevis
ENSXMAG00000018253	NCBP1	100	96.859	ENSCVAG00000008795	NCBP1	100	96.859	Cyprinodon_variegatus
ENSXMAG00000018253	NCBP1	99	81.761	ENSDNOG00000006885	NCBP1	99	82.138	Dasypus_novemcinctus
ENSXMAG00000018253	NCBP1	99	78.348	ENSDORG00000013652	Ncbp1	99	78.723	Dipodomys_ordii
ENSXMAG00000018253	NCBP1	99	56.613	FBgn0022942	Cbp80	99	57.196	Drosophila_melanogaster
ENSXMAG00000018253	NCBP1	82	33.579	FBgn0038887	CG7907	87	33.579	Drosophila_melanogaster
ENSXMAG00000018253	NCBP1	89	78.618	ENSETEG00000009705	NCBP1	89	78.402	Echinops_telfairi
ENSXMAG00000018253	NCBP1	99	73.492	ENSEBUG00000008386	NCBP1	99	73.492	Eptatretus_burgeri
ENSXMAG00000018253	NCBP1	99	82.013	ENSEASG00005022795	NCBP1	99	82.390	Equus_asinus_asinus
ENSXMAG00000018253	NCBP1	99	82.138	ENSECAG00000013847	NCBP1	99	82.516	Equus_caballus
ENSXMAG00000018253	NCBP1	95	78.496	ENSEEUG00000015973	NCBP1	99	78.892	Erinaceus_europaeus
ENSXMAG00000018253	NCBP1	100	91.092	ENSELUG00000022519	NCBP1	100	91.092	Esox_lucius
ENSXMAG00000018253	NCBP1	99	82.390	ENSFCAG00000001206	NCBP1	99	82.767	Felis_catus
ENSXMAG00000018253	NCBP1	98	83.842	ENSFALG00000001193	NCBP1	99	83.842	Ficedula_albicollis
ENSXMAG00000018253	NCBP1	99	82.013	ENSFDAG00000010864	NCBP1	99	82.390	Fukomys_damarensis
ENSXMAG00000018253	NCBP1	100	97.236	ENSFHEG00000000655	NCBP1	100	97.236	Fundulus_heteroclitus
ENSXMAG00000018253	NCBP1	100	90.715	ENSGMOG00000008653	NCBP1	99	90.715	Gadus_morhua
ENSXMAG00000018253	NCBP1	98	83.525	ENSGALG00000002087	NCBP1	99	83.438	Gallus_gallus
ENSXMAG00000018253	NCBP1	100	99.121	ENSGAFG00000017787	NCBP1	100	99.121	Gambusia_affinis
ENSXMAG00000018253	NCBP1	100	93.617	ENSGACG00000016772	NCBP1	99	93.617	Gasterosteus_aculeatus
ENSXMAG00000018253	NCBP1	99	83.522	ENSGAGG00000019483	NCBP1	99	83.522	Gopherus_agassizii
ENSXMAG00000018253	NCBP1	99	82.264	ENSGGOG00000001376	NCBP1	99	82.642	Gorilla_gorilla
ENSXMAG00000018253	NCBP1	100	95.477	ENSHBUG00000020843	NCBP1	100	95.477	Haplochromis_burtoni
ENSXMAG00000018253	NCBP1	99	82.138	ENSHGLG00000001882	NCBP1	99	82.516	Heterocephalus_glaber_female
ENSXMAG00000018253	NCBP1	99	72.271	ENSHGLG00000018112	-	99	72.146	Heterocephalus_glaber_female
ENSXMAG00000018253	NCBP1	99	72.020	ENSHGLG00100017373	-	99	71.895	Heterocephalus_glaber_male
ENSXMAG00000018253	NCBP1	99	82.138	ENSHGLG00100013014	NCBP1	99	82.516	Heterocephalus_glaber_male
ENSXMAG00000018253	NCBP1	74	87.205	ENSHCOG00000000204	NCBP1	87	87.205	Hippocampus_comes
ENSXMAG00000018253	NCBP1	100	89.711	ENSIPUG00000007275	ncbp1	100	89.711	Ictalurus_punctatus
ENSXMAG00000018253	NCBP1	99	82.390	ENSSTOG00000002695	NCBP1	99	82.767	Ictidomys_tridecemlineatus
ENSXMAG00000018253	NCBP1	100	95.980	ENSKMAG00000003594	NCBP1	100	95.980	Kryptolebias_marmoratus
ENSXMAG00000018253	NCBP1	100	93.680	ENSLBEG00000011661	NCBP1	100	93.680	Labrus_bergylta
ENSXMAG00000018253	NCBP1	99	77.460	ENSLACG00000013955	NCBP1	99	78.012	Latimeria_chalumnae
ENSXMAG00000018253	NCBP1	99	76.990	ENSLOCG00000009579	NCBP1	99	77.363	Lepisosteus_oculatus
ENSXMAG00000018253	NCBP1	99	82.138	ENSLAFG00000005999	NCBP1	99	82.516	Loxodonta_africana
ENSXMAG00000018253	NCBP1	99	82.264	ENSMFAG00000030994	NCBP1	99	82.642	Macaca_fascicularis
ENSXMAG00000018253	NCBP1	98	82.015	ENSMMUG00000012281	NCBP1	99	82.461	Macaca_mulatta
ENSXMAG00000018253	NCBP1	99	82.264	ENSMNEG00000042790	NCBP1	99	82.642	Macaca_nemestrina
ENSXMAG00000018253	NCBP1	99	82.264	ENSMLEG00000030374	NCBP1	99	82.642	Mandrillus_leucophaeus
ENSXMAG00000018253	NCBP1	100	95.352	ENSMAMG00000014806	NCBP1	100	95.352	Mastacembelus_armatus
ENSXMAG00000018253	NCBP1	100	95.477	ENSMZEG00005003469	NCBP1	100	95.477	Maylandia_zebra
ENSXMAG00000018253	NCBP1	97	93.161	ENSMZEG00005009290	-	100	93.161	Maylandia_zebra
ENSXMAG00000018253	NCBP1	99	81.416	ENSMAUG00000020583	Ncbp1	99	81.795	Mesocricetus_auratus
ENSXMAG00000018253	NCBP1	99	81.761	ENSMICG00000012682	NCBP1	99	82.138	Microcebus_murinus
ENSXMAG00000018253	NCBP1	99	81.887	ENSMOCG00000015818	Ncbp1	99	82.264	Microtus_ochrogaster
ENSXMAG00000018253	NCBP1	91	93.075	ENSMMOG00000002610	NCBP1	100	92.105	Mola_mola
ENSXMAG00000018253	NCBP1	99	81.635	ENSMODG00000003202	NCBP1	99	81.635	Monodelphis_domestica
ENSXMAG00000018253	NCBP1	100	95.477	ENSMALG00000003547	NCBP1	100	95.477	Monopterus_albus
ENSXMAG00000018253	NCBP1	99	82.264	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.642	Mus_caroli
ENSXMAG00000018253	NCBP1	99	82.264	ENSMUSG00000028330	Ncbp1	99	82.642	Mus_musculus
ENSXMAG00000018253	NCBP1	99	82.264	MGP_PahariEiJ_G0028318	Ncbp1	99	82.642	Mus_pahari
ENSXMAG00000018253	NCBP1	99	82.264	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.642	Mus_spretus
ENSXMAG00000018253	NCBP1	99	82.642	ENSMPUG00000006399	NCBP1	99	83.019	Mustela_putorius_furo
ENSXMAG00000018253	NCBP1	98	81.122	ENSMLUG00000015201	NCBP1	99	81.505	Myotis_lucifugus
ENSXMAG00000018253	NCBP1	99	82.893	ENSNGAG00000014101	Ncbp1	99	82.893	Nannospalax_galili
ENSXMAG00000018253	NCBP1	76	98.238	ENSNBRG00000014674	NCBP1	97	98.238	Neolamprologus_brichardi
ENSXMAG00000018253	NCBP1	99	82.264	ENSNLEG00000016909	NCBP1	99	82.642	Nomascus_leucogenys
ENSXMAG00000018253	NCBP1	89	81.211	ENSMEUG00000010672	NCBP1	90	81.211	Notamacropus_eugenii
ENSXMAG00000018253	NCBP1	84	74.454	ENSOPRG00000002144	-	88	75.126	Ochotona_princeps
ENSXMAG00000018253	NCBP1	99	82.138	ENSODEG00000003232	NCBP1	99	82.516	Octodon_degus
ENSXMAG00000018253	NCBP1	100	95.226	ENSONIG00000001502	NCBP1	100	95.226	Oreochromis_niloticus
ENSXMAG00000018253	NCBP1	78	85.393	ENSOANG00000001918	NCBP1	100	85.393	Ornithorhynchus_anatinus
ENSXMAG00000018253	NCBP1	98	81.818	ENSOCUG00000013853	NCBP1	97	82.330	Oryctolagus_cuniculus
ENSXMAG00000018253	NCBP1	100	94.875	ENSORLG00000011008	NCBP1	100	94.875	Oryzias_latipes
ENSXMAG00000018253	NCBP1	100	95.125	ENSORLG00020017455	NCBP1	100	95.125	Oryzias_latipes_hni
ENSXMAG00000018253	NCBP1	100	95.000	ENSORLG00015012127	NCBP1	100	95.000	Oryzias_latipes_hsok
ENSXMAG00000018253	NCBP1	100	95.375	ENSOMEG00000020698	NCBP1	100	95.375	Oryzias_melastigma
ENSXMAG00000018253	NCBP1	99	82.183	ENSOGAG00000013888	NCBP1	99	82.560	Otolemur_garnettii
ENSXMAG00000018253	NCBP1	99	82.264	ENSOARG00000011233	NCBP1	99	82.642	Ovis_aries
ENSXMAG00000018253	NCBP1	99	82.264	ENSPPAG00000026462	NCBP1	99	82.642	Pan_paniscus
ENSXMAG00000018253	NCBP1	99	82.516	ENSPPRG00000022574	NCBP1	99	82.893	Panthera_pardus
ENSXMAG00000018253	NCBP1	99	82.516	ENSPTIG00000018507	NCBP1	99	82.893	Panthera_tigris_altaica
ENSXMAG00000018253	NCBP1	99	82.264	ENSPTRG00000021167	NCBP1	99	82.642	Pan_troglodytes
ENSXMAG00000018253	NCBP1	99	82.264	ENSPANG00000025591	NCBP1	99	82.642	Papio_anubis
ENSXMAG00000018253	NCBP1	99	87.673	ENSPKIG00000015861	NCBP1	99	87.547	Paramormyrops_kingsleyae
ENSXMAG00000018253	NCBP1	64	82.422	ENSPSIG00000009558	NCBP1	99	82.422	Pelodiscus_sinensis
ENSXMAG00000018253	NCBP1	100	89.987	ENSPMGG00000020476	NCBP1	100	89.987	Periophthalmus_magnuspinnatus
ENSXMAG00000018253	NCBP1	99	81.509	ENSPEMG00000020105	Ncbp1	99	82.013	Peromyscus_maniculatus_bairdii
ENSXMAG00000018253	NCBP1	99	68.204	ENSPMAG00000005533	NCBP1	99	67.955	Petromyzon_marinus
ENSXMAG00000018253	NCBP1	99	81.635	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSXMAG00000018253	NCBP1	100	98.248	ENSPFOG00000004158	NCBP1	100	98.248	Poecilia_formosa
ENSXMAG00000018253	NCBP1	100	98.869	ENSPLAG00000020002	NCBP1	100	98.869	Poecilia_latipinna
ENSXMAG00000018253	NCBP1	100	98.618	ENSPMEG00000019821	NCBP1	100	98.618	Poecilia_mexicana
ENSXMAG00000018253	NCBP1	100	98.243	ENSPREG00000006035	NCBP1	100	98.243	Poecilia_reticulata
ENSXMAG00000018253	NCBP1	99	82.264	ENSPPYG00000019426	NCBP1	99	82.642	Pongo_abelii
ENSXMAG00000018253	NCBP1	90	80.060	ENSPCAG00000009943	NCBP1	90	80.060	Procavia_capensis
ENSXMAG00000018253	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSXMAG00000018253	NCBP1	99	82.138	ENSPVAG00000005924	NCBP1	99	82.516	Pteropus_vampyrus
ENSXMAG00000018253	NCBP1	91	94.175	ENSPNYG00000002140	NCBP1	99	94.175	Pundamilia_nyererei
ENSXMAG00000018253	NCBP1	100	90.226	ENSPNAG00000027753	NCBP1	100	90.226	Pygocentrus_nattereri
ENSXMAG00000018253	NCBP1	99	82.138	ENSRNOG00000023605	Ncbp1	99	82.642	Rattus_norvegicus
ENSXMAG00000018253	NCBP1	99	82.264	ENSRBIG00000043175	NCBP1	99	82.642	Rhinopithecus_bieti
ENSXMAG00000018253	NCBP1	99	82.264	ENSRROG00000029767	NCBP1	99	82.642	Rhinopithecus_roxellana
ENSXMAG00000018253	NCBP1	99	82.264	ENSSBOG00000019378	NCBP1	98	87.073	Saimiri_boliviensis_boliviensis
ENSXMAG00000018253	NCBP1	99	55.779	ENSSHAG00000015882	NCBP1	99	55.960	Sarcophilus_harrisii
ENSXMAG00000018253	NCBP1	98	85.842	ENSSFOG00015001872	NCBP1	99	85.157	Scleropages_formosus
ENSXMAG00000018253	NCBP1	100	93.467	ENSSMAG00000007463	NCBP1	100	93.467	Scophthalmus_maximus
ENSXMAG00000018253	NCBP1	100	94.975	ENSSDUG00000007019	NCBP1	100	95.753	Seriola_dumerili
ENSXMAG00000018253	NCBP1	100	95.980	ENSSLDG00000021924	NCBP1	100	95.980	Seriola_lalandi_dorsalis
ENSXMAG00000018253	NCBP1	85	70.842	ENSSARG00000007274	NCBP1	86	71.706	Sorex_araneus
ENSXMAG00000018253	NCBP1	99	77.107	ENSSPUG00000008609	NCBP1	99	77.107	Sphenodon_punctatus
ENSXMAG00000018253	NCBP1	100	96.985	ENSSPAG00000012550	NCBP1	100	96.985	Stegastes_partitus
ENSXMAG00000018253	NCBP1	99	82.264	ENSSSCG00000005366	NCBP1	99	82.642	Sus_scrofa
ENSXMAG00000018253	NCBP1	99	78.868	ENSTGUG00000001472	NCBP1	99	79.119	Taeniopygia_guttata
ENSXMAG00000018253	NCBP1	100	93.342	ENSTRUG00000005287	NCBP1	100	93.342	Takifugu_rubripes
ENSXMAG00000018253	NCBP1	99	79.874	ENSTBEG00000004035	NCBP1	99	80.252	Tupaia_belangeri
ENSXMAG00000018253	NCBP1	88	84.729	ENSTTRG00000000507	NCBP1	88	84.729	Tursiops_truncatus
ENSXMAG00000018253	NCBP1	99	82.390	ENSUAMG00000005471	NCBP1	99	82.767	Ursus_americanus
ENSXMAG00000018253	NCBP1	97	80.103	ENSUMAG00000011865	NCBP1	99	82.267	Ursus_maritimus
ENSXMAG00000018253	NCBP1	99	78.868	ENSVPAG00000010537	NCBP1	99	79.245	Vicugna_pacos
ENSXMAG00000018253	NCBP1	99	82.516	ENSVVUG00000019725	NCBP1	99	82.893	Vulpes_vulpes
ENSXMAG00000018253	NCBP1	99	79.020	ENSXETG00000010179	ncbp1	99	79.020	Xenopus_tropicalis