EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018267 (Gene tree)
Gene ID: 102226110
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4451 bases
Position: chr12:18100651-18105101
Accession: 102226110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018301	Glu-tRNAGln	PF02686.15	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018328	-	1559	XM_023343430	ENSXMAP00000018301	185 (aa)	XP_023199198	M4AV06

Gene Model

Click here to download ENSXMAG00000018267's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG
xma01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018267	gatc	54	63.000	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSXMAG00000018267	gatc	54	64.000	ENSAMEG00000013298	-	74	64.000	Ailuropoda_melanoleuca
ENSXMAG00000018267	gatc	52	82.292	ENSACIG00000016853	gatc	69	82.292	Amphilophus_citrinellus
ENSXMAG00000018267	gatc	68	85.600	ENSAOCG00000014641	gatc	100	85.600	Amphiprion_ocellaris
ENSXMAG00000018267	gatc	99	65.625	ENSAPEG00000023411	gatc	98	65.625	Amphiprion_percula
ENSXMAG00000018267	gatc	52	87.500	ENSATEG00000009237	gatc	79	87.500	Anabas_testudineus
ENSXMAG00000018267	gatc	51	78.947	ENSACAG00000002868	-	70	78.947	Anolis_carolinensis
ENSXMAG00000018267	gatc	54	64.000	ENSANAG00000034389	-	74	64.000	Aotus_nancymaae
ENSXMAG00000018267	gatc	100	66.842	ENSACLG00000026251	gatc	99	66.842	Astatotilapia_calliptera
ENSXMAG00000018267	gatc	71	78.788	ENSAMXG00000004252	gatc	71	69.753	Astyanax_mexicanus
ENSXMAG00000018267	gatc	54	60.000	ENSBTAG00000012791	GATC	74	60.000	Bos_taurus
ENSXMAG00000018267	gatc	63	37.607	WBGene00013433	Y66D12A.7	67	37.607	Caenorhabditis_elegans
ENSXMAG00000018267	gatc	54	64.000	ENSCJAG00000001183	-	55	64.000	Callithrix_jacchus
ENSXMAG00000018267	gatc	54	65.000	ENSCAFG00000010311	-	74	65.000	Canis_familiaris
ENSXMAG00000018267	gatc	54	65.000	ENSCAFG00020020606	-	74	65.000	Canis_lupus_dingo
ENSXMAG00000018267	gatc	57	57.547	ENSCHIG00000019423	-	78	57.547	Capra_hircus
ENSXMAG00000018267	gatc	54	63.000	ENSTSYG00000006845	-	74	63.000	Carlito_syrichta
ENSXMAG00000018267	gatc	54	64.000	ENSCCAG00000022235	-	74	64.000	Cebus_capucinus
ENSXMAG00000018267	gatc	54	63.000	ENSCATG00000038807	GATC	74	63.000	Cercocebus_atys
ENSXMAG00000018267	gatc	52	62.500	ENSCLAG00000011015	-	60	62.500	Chinchilla_lanigera
ENSXMAG00000018267	gatc	54	64.000	ENSCSAG00000002259	GATC	74	64.000	Chlorocebus_sabaeus
ENSXMAG00000018267	gatc	54	63.000	ENSCHOG00000009235	-	74	63.000	Choloepus_hoffmanni
ENSXMAG00000018267	gatc	69	64.062	ENSCPBG00000011342	-	68	64.062	Chrysemys_picta_bellii
ENSXMAG00000018267	gatc	55	62.376	ENSCANG00000031071	GATC	74	62.376	Colobus_angolensis_palliatus
ENSXMAG00000018267	gatc	62	53.043	ENSCGRG00001005508	-	56	53.043	Cricetulus_griseus_chok1gshd
ENSXMAG00000018267	gatc	62	55.652	ENSCGRG00001019220	-	74	55.652	Cricetulus_griseus_chok1gshd
ENSXMAG00000018267	gatc	62	55.652	ENSCGRG00000004184	-	74	55.652	Cricetulus_griseus_crigri
ENSXMAG00000018267	gatc	62	52.174	ENSCGRG00000019471	GATC	56	52.174	Cricetulus_griseus_crigri
ENSXMAG00000018267	gatc	100	54.211	ENSCSEG00000016618	-	99	54.211	Cynoglossus_semilaevis
ENSXMAG00000018267	gatc	99	64.516	ENSCSEG00000007798	gatc	92	64.516	Cynoglossus_semilaevis
ENSXMAG00000018267	gatc	100	80.952	ENSCVAG00000004364	gatc	100	80.952	Cyprinodon_variegatus
ENSXMAG00000018267	gatc	99	60.326	ENSDARG00000056855	gatc	95	60.326	Danio_rerio
ENSXMAG00000018267	gatc	79	47.260	ENSDNOG00000012593	-	76	47.260	Dasypus_novemcinctus
ENSXMAG00000018267	gatc	63	44.444	FBgn0064115	GatC	78	44.444	Drosophila_melanogaster
ENSXMAG00000018267	gatc	54	53.535	ENSETEG00000002604	-	73	53.535	Echinops_telfairi
ENSXMAG00000018267	gatc	54	50.505	ENSEBUG00000008772	gatc	56	50.505	Eptatretus_burgeri
ENSXMAG00000018267	gatc	54	65.000	ENSECAG00000011118	-	74	65.000	Equus_caballus
ENSXMAG00000018267	gatc	54	57.576	ENSEEUG00000011638	-	73	57.576	Erinaceus_europaeus
ENSXMAG00000018267	gatc	68	69.231	ENSELUG00000012608	gatc	75	77.670	Esox_lucius
ENSXMAG00000018267	gatc	54	64.000	ENSFCAG00000038718	-	74	64.000	Felis_catus
ENSXMAG00000018267	gatc	73	55.556	ENSFALG00000007564	-	84	55.556	Ficedula_albicollis
ENSXMAG00000018267	gatc	59	63.636	ENSFDAG00000018720	-	80	63.636	Fukomys_damarensis
ENSXMAG00000018267	gatc	100	83.333	ENSFHEG00000014992	GATC	100	83.333	Fundulus_heteroclitus
ENSXMAG00000018267	gatc	87	63.354	ENSGMOG00000008742	gatc	100	63.354	Gadus_morhua
ENSXMAG00000018267	gatc	57	62.264	ENSGALG00000007195	-	79	60.360	Gallus_gallus
ENSXMAG00000018267	gatc	69	98.438	ENSGAFG00000012801	gatc	81	98.438	Gambusia_affinis
ENSXMAG00000018267	gatc	100	66.321	ENSGACG00000008973	gatc	99	66.321	Gasterosteus_aculeatus
ENSXMAG00000018267	gatc	69	64.844	ENSGAGG00000016018	-	70	64.844	Gopherus_agassizii
ENSXMAG00000018267	gatc	100	66.316	ENSHBUG00000006827	gatc	99	66.316	Haplochromis_burtoni
ENSXMAG00000018267	gatc	58	62.617	ENSHGLG00000011394	GATC	78	62.617	Heterocephalus_glaber_female
ENSXMAG00000018267	gatc	58	60.748	ENSHGLG00100018850	-	77	60.748	Heterocephalus_glaber_male
ENSXMAG00000018267	gatc	69	75.781	ENSHCOG00000009209	gatc	100	75.781	Hippocampus_comes
ENSXMAG00000018267	gatc	90	58.084	ENSIPUG00000023072	gatc	83	58.084	Ictalurus_punctatus
ENSXMAG00000018267	gatc	54	63.000	ENSSTOG00000025740	-	65	63.000	Ictidomys_tridecemlineatus
ENSXMAG00000018267	gatc	52	63.542	ENSJJAG00000000369	Gatc	61	63.542	Jaculus_jaculus
ENSXMAG00000018267	gatc	70	79.845	ENSKMAG00000016476	gatc	99	79.845	Kryptolebias_marmoratus
ENSXMAG00000018267	gatc	94	67.630	ENSLBEG00000007603	gatc	92	67.630	Labrus_bergylta
ENSXMAG00000018267	gatc	84	56.129	ENSLACG00000018239	-	79	56.129	Latimeria_chalumnae
ENSXMAG00000018267	gatc	70	71.318	ENSLOCG00000004056	gatc	70	71.318	Lepisosteus_oculatus
ENSXMAG00000018267	gatc	54	63.000	ENSMFAG00000034197	GATC	74	63.000	Macaca_fascicularis
ENSXMAG00000018267	gatc	54	63.000	ENSMMUG00000046665	GATC	74	63.000	Macaca_mulatta
ENSXMAG00000018267	gatc	54	63.000	ENSMNEG00000034653	GATC	74	63.000	Macaca_nemestrina
ENSXMAG00000018267	gatc	54	64.000	ENSMLEG00000039862	GATC	74	64.000	Mandrillus_leucophaeus
ENSXMAG00000018267	gatc	99	66.304	ENSMAMG00000015851	gatc	98	66.304	Mastacembelus_armatus
ENSXMAG00000018267	gatc	100	66.842	ENSMZEG00005016072	gatc	99	66.842	Maylandia_zebra
ENSXMAG00000018267	gatc	57	64.151	ENSMGAG00000008733	-	100	64.151	Meleagris_gallopavo
ENSXMAG00000018267	gatc	62	57.391	ENSMAUG00000012756	Gatc	74	57.391	Mesocricetus_auratus
ENSXMAG00000018267	gatc	54	64.000	ENSMICG00000008669	-	74	64.000	Microcebus_murinus
ENSXMAG00000018267	gatc	51	63.158	ENSMOCG00000005051	Gatc	61	63.158	Microtus_ochrogaster
ENSXMAG00000018267	gatc	68	73.810	ENSMMOG00000017695	gatc	92	80.909	Mola_mola
ENSXMAG00000018267	gatc	54	63.000	ENSMODG00000003152	-	76	63.000	Monodelphis_domestica
ENSXMAG00000018267	gatc	52	63.542	MGP_PahariEiJ_G0024203	Gatc	62	63.542	Mus_pahari
ENSXMAG00000018267	gatc	54	65.000	ENSMPUG00000003183	-	74	65.000	Mustela_putorius_furo
ENSXMAG00000018267	gatc	51	61.053	ENSMLUG00000010341	-	94	61.053	Myotis_lucifugus
ENSXMAG00000018267	gatc	50	63.441	ENSNGAG00000004734	Gatc	61	63.441	Nannospalax_galili
ENSXMAG00000018267	gatc	100	66.842	ENSNBRG00000007810	gatc	99	66.842	Neolamprologus_brichardi
ENSXMAG00000018267	gatc	57	60.377	ENSNLEG00000015651	GATC	78	60.377	Nomascus_leucogenys
ENSXMAG00000018267	gatc	56	61.538	ENSMEUG00000004064	-	84	61.538	Notamacropus_eugenii
ENSXMAG00000018267	gatc	55	63.366	ENSOPRG00000004226	-	74	63.366	Ochotona_princeps
ENSXMAG00000018267	gatc	70	78.788	ENSONIG00000013444	gatc	91	78.788	Oreochromis_niloticus
ENSXMAG00000018267	gatc	54	65.000	ENSOCUG00000009867	-	74	65.000	Oryctolagus_cuniculus
ENSXMAG00000018267	gatc	65	77.686	ENSORLG00000007156	gatc	100	77.686	Oryzias_latipes
ENSXMAG00000018267	gatc	94	65.363	ENSORLG00020014991	gatc	93	65.363	Oryzias_latipes_hni
ENSXMAG00000018267	gatc	98	64.481	ENSORLG00015003450	gatc	97	64.481	Oryzias_latipes_hsok
ENSXMAG00000018267	gatc	76	74.468	ENSOMEG00000002280	gatc	75	74.468	Oryzias_melastigma
ENSXMAG00000018267	gatc	56	61.538	ENSOGAG00000003850	-	95	61.538	Otolemur_garnettii
ENSXMAG00000018267	gatc	59	56.637	ENSOARG00000012338	-	88	56.637	Ovis_aries
ENSXMAG00000018267	gatc	54	63.000	ENSPPAG00000029164	GATC	74	63.000	Pan_paniscus
ENSXMAG00000018267	gatc	54	64.000	ENSPPRG00000000929	-	74	64.000	Panthera_pardus
ENSXMAG00000018267	gatc	54	64.000	ENSPTIG00000009889	-	74	64.000	Panthera_tigris_altaica
ENSXMAG00000018267	gatc	54	63.000	ENSPTRG00000049887	GATC	74	63.000	Pan_troglodytes
ENSXMAG00000018267	gatc	54	62.000	ENSPANG00000033975	GATC	74	62.000	Papio_anubis
ENSXMAG00000018267	gatc	88	62.577	ENSPKIG00000024856	gatc	81	62.577	Paramormyrops_kingsleyae
ENSXMAG00000018267	gatc	62	65.517	ENSPSIG00000011112	-	99	65.517	Pelodiscus_sinensis
ENSXMAG00000018267	gatc	74	76.471	ENSPMGG00000018829	gatc	86	76.471	Periophthalmus_magnuspinnatus
ENSXMAG00000018267	gatc	51	65.957	ENSPEMG00000000665	Gatc	61	65.957	Peromyscus_maniculatus_bairdii
ENSXMAG00000018267	gatc	51	62.105	ENSPCIG00000025999	-	62	62.105	Phascolarctos_cinereus
ENSXMAG00000018267	gatc	100	93.514	ENSPFOG00000011603	gatc	100	93.514	Poecilia_formosa
ENSXMAG00000018267	gatc	100	92.973	ENSPLAG00000002471	gatc	100	92.973	Poecilia_latipinna
ENSXMAG00000018267	gatc	100	92.973	ENSPMEG00000020958	gatc	100	92.973	Poecilia_mexicana
ENSXMAG00000018267	gatc	61	95.614	ENSPREG00000022256	gatc	75	96.396	Poecilia_reticulata
ENSXMAG00000018267	gatc	58	61.682	ENSPPYG00000005030	GATC	78	61.682	Pongo_abelii
ENSXMAG00000018267	gatc	63	55.085	ENSPCAG00000013864	-	87	55.085	Procavia_capensis
ENSXMAG00000018267	gatc	60	51.351	ENSPCOG00000015558	-	86	51.351	Propithecus_coquereli
ENSXMAG00000018267	gatc	52	66.667	ENSPVAG00000002228	-	71	66.667	Pteropus_vampyrus
ENSXMAG00000018267	gatc	100	66.842	ENSPNYG00000016015	gatc	99	66.842	Pundamilia_nyererei
ENSXMAG00000018267	gatc	70	75.194	ENSPNAG00000001239	gatc	72	64.815	Pygocentrus_nattereri
ENSXMAG00000018267	gatc	55	57.009	ENSRNOG00000045621	Gatc	70	57.009	Rattus_norvegicus
ENSXMAG00000018267	gatc	51	65.263	ENSRNOG00000001161	Gatc	61	65.263	Rattus_norvegicus
ENSXMAG00000018267	gatc	54	62.000	ENSRBIG00000033363	GATC	74	62.000	Rhinopithecus_bieti
ENSXMAG00000018267	gatc	54	62.000	ENSRROG00000042802	GATC	74	62.000	Rhinopithecus_roxellana
ENSXMAG00000018267	gatc	57	59.434	ENSSBOG00000033750	-	78	59.434	Saimiri_boliviensis_boliviensis
ENSXMAG00000018267	gatc	54	63.000	ENSSHAG00000005745	-	94	63.000	Sarcophilus_harrisii
ENSXMAG00000018267	gatc	60	79.279	ENSSFOG00015002508	gatc	70	76.364	Scleropages_formosus
ENSXMAG00000018267	gatc	97	69.780	ENSSMAG00000014280	gatc	96	69.780	Scophthalmus_maximus
ENSXMAG00000018267	gatc	100	68.557	ENSSDUG00000012206	gatc	99	68.557	Seriola_dumerili
ENSXMAG00000018267	gatc	100	67.358	ENSSLDG00000025159	gatc	97	67.358	Seriola_lalandi_dorsalis
ENSXMAG00000018267	gatc	64	59.664	ENSSPUG00000015693	-	72	66.667	Sphenodon_punctatus
ENSXMAG00000018267	gatc	94	71.751	ENSSPAG00000011860	gatc	93	71.751	Stegastes_partitus
ENSXMAG00000018267	gatc	52	65.625	ENSSSCG00000032747	-	70	65.625	Sus_scrofa
ENSXMAG00000018267	gatc	58	67.290	ENSTGUG00000009561	-	99	67.290	Taeniopygia_guttata
ENSXMAG00000018267	gatc	74	79.562	ENSTRUG00000021596	gatc	83	68.862	Takifugu_rubripes
ENSXMAG00000018267	gatc	77	75.352	ENSTNIG00000015879	gatc	69	75.352	Tetraodon_nigroviridis
ENSXMAG00000018267	gatc	54	64.000	ENSTTRG00000000144	GATC	74	64.000	Tursiops_truncatus
ENSXMAG00000018267	gatc	54	65.000	ENSUAMG00000015523	-	74	65.000	Ursus_americanus
ENSXMAG00000018267	gatc	54	65.000	ENSVVUG00000021055	-	74	65.000	Vulpes_vulpes
ENSXMAG00000018267	gatc	61	99.107	ENSXCOG00000017087	gatc	82	99.107	Xiphophorus_couchianus