EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018347 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 3-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 17974 bases
Position: chr4:2438020-2455993
Accession: 106699890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	1	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	2	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	3	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	4	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	5	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	6	7
ENSXMAP00000018382	zf-C2H2	PF00096.26	6.9e-37	7	7
ENSXMAP00000018382	zf-met	PF12874.7	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018409	-	1482	XM_014472156	ENSXMAP00000018382	493 (aa)	XP_014327642	M4AV87

Gene Model

Click here to download ENSXMAG00000018347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018347	-	70	50.270	ENSG00000175213	ZNF408	51	50.270	Homo_sapiens
ENSXMAG00000018347	-	72	49.604	ENSAMEG00000006904	ZNF408	52	49.604	Ailuropoda_melanoleuca
ENSXMAG00000018347	-	70	49.865	ENSANAG00000036294	ZNF408	56	49.865	Aotus_nancymaae
ENSXMAG00000018347	-	96	53.846	ENSAMXG00000032642	znf408	76	53.846	Astyanax_mexicanus
ENSXMAG00000018347	-	70	49.326	ENSCJAG00000019859	ZNF408	51	49.596	Callithrix_jacchus
ENSXMAG00000018347	-	72	48.177	ENSCAFG00000009143	ZNF408	51	49.219	Canis_familiaris
ENSXMAG00000018347	-	72	48.177	ENSCAFG00020019155	ZNF408	51	49.219	Canis_lupus_dingo
ENSXMAG00000018347	-	72	48.930	ENSCHIG00000025346	ZNF408	61	48.930	Capra_hircus
ENSXMAG00000018347	-	70	48.919	ENSTSYG00000025443	ZNF408	53	49.731	Carlito_syrichta
ENSXMAG00000018347	-	87	44.538	ENSCCAG00000029472	ZNF408	66	45.397	Cebus_capucinus
ENSXMAG00000018347	-	60	58.503	ENSCHOG00000009909	ZNF408	54	58.503	Choloepus_hoffmanni
ENSXMAG00000018347	-	70	47.568	ENSCGRG00001023588	Zfp408	52	47.568	Cricetulus_griseus_chok1gshd
ENSXMAG00000018347	-	70	47.568	ENSCGRG00000017618	Zfp408	52	47.568	Cricetulus_griseus_crigri
ENSXMAG00000018347	-	70	51.233	ENSDNOG00000047669	ZNF408	51	51.233	Dasypus_novemcinctus
ENSXMAG00000018347	-	65	53.750	ENSDORG00000000387	Zfp408	52	50.568	Dipodomys_ordii
ENSXMAG00000018347	-	66	49.219	ENSETEG00000017621	-	64	43.678	Echinops_telfairi
ENSXMAG00000018347	-	70	49.189	ENSEASG00005015461	ZNF408	53	49.189	Equus_asinus_asinus
ENSXMAG00000018347	-	70	49.326	ENSECAG00000010878	ZNF408	54	49.326	Equus_caballus
ENSXMAG00000018347	-	78	53.846	ENSEEUG00000010466	ZNF408	54	48.021	Erinaceus_europaeus
ENSXMAG00000018347	-	70	49.326	ENSFCAG00000029105	ZNF408	53	49.215	Felis_catus
ENSXMAG00000018347	-	87	81.915	ENSFHEG00000016754	-	80	82.181	Fundulus_heteroclitus
ENSXMAG00000018347	-	57	62.898	ENSGMOG00000007809	-	100	62.898	Gadus_morhua
ENSXMAG00000018347	-	100	88.000	ENSGAFG00000018557	-	80	88.000	Gambusia_affinis
ENSXMAG00000018347	-	70	50.270	ENSGGOG00000010152	ZNF408	51	50.270	Gorilla_gorilla
ENSXMAG00000018347	-	70	49.057	ENSLAFG00000027848	ZNF408	65	46.829	Loxodonta_africana
ENSXMAG00000018347	-	70	49.057	ENSMICG00000045320	ZNF408	51	49.596	Microcebus_murinus
ENSXMAG00000018347	-	72	49.077	ENSMPUG00000005490	ZNF408	52	49.077	Mustela_putorius_furo
ENSXMAG00000018347	-	85	44.902	ENSNGAG00000000309	Zfp408	64	44.420	Nannospalax_galili
ENSXMAG00000018347	-	72	49.479	ENSNLEG00000014132	ZNF408	51	50.270	Nomascus_leucogenys
ENSXMAG00000018347	-	70	50.954	ENSOPRG00000009225	ZNF408	54	51.233	Ochotona_princeps
ENSXMAG00000018347	-	86	43.709	ENSOCUG00000010953	ZNF408	52	48.787	Oryctolagus_cuniculus
ENSXMAG00000018347	-	70	50.674	ENSOGAG00000034080	ZNF408	60	50.674	Otolemur_garnettii
ENSXMAG00000018347	-	70	50.270	ENSPPAG00000034993	ZNF408	51	50.270	Pan_paniscus
ENSXMAG00000018347	-	70	49.326	ENSPPRG00000016866	ZNF408	53	49.215	Panthera_pardus
ENSXMAG00000018347	-	70	49.326	ENSPTIG00000015467	ZNF408	52	49.215	Panthera_tigris_altaica
ENSXMAG00000018347	-	70	50.270	ENSPTRG00000003551	ZNF408	51	50.270	Pan_troglodytes
ENSXMAG00000018347	-	61	55.960	ENSPEMG00000016757	Zfp408	55	55.960	Peromyscus_maniculatus_bairdii
ENSXMAG00000018347	-	100	89.333	ENSPFOG00000001760	-	100	88.889	Poecilia_formosa
ENSXMAG00000018347	-	87	92.149	ENSPLAG00000019895	-	68	92.149	Poecilia_latipinna
ENSXMAG00000018347	-	86	87.865	ENSPMEG00000021147	-	86	87.865	Poecilia_mexicana
ENSXMAG00000018347	-	100	90.667	ENSPREG00000017068	-	79	90.667	Poecilia_reticulata
ENSXMAG00000018347	-	70	50.000	ENSPPYG00000003318	ZNF408	62	50.000	Pongo_abelii
ENSXMAG00000018347	-	75	47.382	ENSPCAG00000014001	ZNF408	69	43.056	Procavia_capensis
ENSXMAG00000018347	-	70	49.189	ENSPCOG00000028698	ZNF408	51	49.596	Propithecus_coquereli
ENSXMAG00000018347	-	70	49.189	ENSPVAG00000015791	ZNF408	52	49.189	Pteropus_vampyrus
ENSXMAG00000018347	-	70	49.730	ENSSBOG00000033023	ZNF408	51	50.269	Saimiri_boliviensis_boliviensis
ENSXMAG00000018347	-	72	49.077	ENSUAMG00000026154	ZNF408	52	49.077	Ursus_americanus
ENSXMAG00000018347	-	72	49.077	ENSUMAG00000014405	ZNF408	52	49.077	Ursus_maritimus
ENSXMAG00000018347	-	70	49.067	ENSVVUG00000026805	ZNF408	50	49.333	Vulpes_vulpes
ENSXMAG00000018347	-	70	44.681	ENSXETG00000001980	znf408	99	44.681	Xenopus_tropicalis
ENSXMAG00000018347	-	100	92.659	ENSXCOG00000002869	-	100	92.659	Xiphophorus_couchianus