EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018379 (Gene tree)
Gene ID: 102217590
Gene Symbol: wdr43
Alias: kiaa0007l|un-named hi821a|unm hi821a|wdr43l|wu:fb83h12|wu:fc13e01|zgc:110501
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 16001 bases
Position: chr19:14630557-14646557
Accession: 102217590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018432	Utp12	PF04003.12	6.8e-20	1	1
ENSXMAP00000041523	Utp12	PF04003.12	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000020988	-	3991	XM_005799108	ENSXMAP00000041523	650 (aa)	XP_005799165	UPI000293E30F
ENSXMAT00000018459	-	1881	-	ENSXMAP00000018432	626 (aa)	-	M4AVD7

Gene Model

Click here to download ENSXMAG00000018379's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018379	wdr43	98	52.174	ENSG00000163811	WDR43	100	56.463	Homo_sapiens
ENSXMAG00000018379	wdr43	99	84.722	ENSAPOG00000020303	wdr43	99	86.656	Acanthochromis_polyacanthus
ENSXMAG00000018379	wdr43	98	51.420	ENSAMEG00000005150	WDR43	87	53.997	Ailuropoda_melanoleuca
ENSXMAG00000018379	wdr43	99	83.489	ENSACIG00000010675	wdr43	99	83.333	Amphilophus_citrinellus
ENSXMAG00000018379	wdr43	93	86.326	ENSAOCG00000006818	wdr43	96	86.326	Amphiprion_ocellaris
ENSXMAG00000018379	wdr43	99	84.259	ENSAPEG00000000552	wdr43	99	84.414	Amphiprion_percula
ENSXMAG00000018379	wdr43	99	83.256	ENSATEG00000010805	wdr43	99	83.566	Anabas_testudineus
ENSXMAG00000018379	wdr43	88	55.254	ENSAPLG00000014314	WDR43	93	56.631	Anas_platyrhynchos
ENSXMAG00000018379	wdr43	91	56.684	ENSACAG00000009264	WDR43	89	56.508	Anolis_carolinensis
ENSXMAG00000018379	wdr43	98	52.844	ENSANAG00000035736	WDR43	89	54.649	Aotus_nancymaae
ENSXMAG00000018379	wdr43	99	85.826	ENSACLG00000025675	wdr43	99	85.047	Astatotilapia_calliptera
ENSXMAG00000018379	wdr43	100	68.282	ENSAMXG00000018623	wdr43	92	70.833	Astyanax_mexicanus
ENSXMAG00000018379	wdr43	98	52.757	ENSBTAG00000018196	WDR43	97	52.545	Bos_taurus
ENSXMAG00000018379	wdr43	98	52.545	ENSCJAG00000008946	WDR43	89	54.486	Callithrix_jacchus
ENSXMAG00000018379	wdr43	98	51.714	ENSCAFG00000005253	WDR43	89	53.834	Canis_familiaris
ENSXMAG00000018379	wdr43	89	54.653	ENSCAFG00020024035	WDR43	82	53.682	Canis_lupus_dingo
ENSXMAG00000018379	wdr43	98	53.284	ENSCHIG00000006001	WDR43	97	52.844	Capra_hircus
ENSXMAG00000018379	wdr43	89	53.018	ENSTSYG00000006448	WDR43	87	56.203	Carlito_syrichta
ENSXMAG00000018379	wdr43	89	44.444	ENSCAPG00000014276	WDR43	99	39.367	Cavia_aperea
ENSXMAG00000018379	wdr43	98	52.395	ENSCCAG00000028533	WDR43	89	54.160	Cebus_capucinus
ENSXMAG00000018379	wdr43	98	52.545	ENSCATG00000031005	WDR43	89	54.649	Cercocebus_atys
ENSXMAG00000018379	wdr43	98	53.223	ENSCLAG00000011898	WDR43	89	54.739	Chinchilla_lanigera
ENSXMAG00000018379	wdr43	73	50.099	ENSCSAG00000010665	WDR43	89	52.232	Chlorocebus_sabaeus
ENSXMAG00000018379	wdr43	98	52.624	ENSCHOG00000013830	WDR43	87	53.997	Choloepus_hoffmanni
ENSXMAG00000018379	wdr43	98	54.247	ENSCPBG00000000374	WDR43	90	56.220	Chrysemys_picta_bellii
ENSXMAG00000018379	wdr43	98	50.300	ENSCANG00000033059	WDR43	89	51.555	Colobus_angolensis_palliatus
ENSXMAG00000018379	wdr43	98	51.420	ENSCGRG00001023204	Wdr43	89	53.997	Cricetulus_griseus_chok1gshd
ENSXMAG00000018379	wdr43	90	50.490	ENSCGRG00000005070	Wdr43	89	53.237	Cricetulus_griseus_crigri
ENSXMAG00000018379	wdr43	99	78.207	ENSCSEG00000016372	wdr43	98	80.855	Cynoglossus_semilaevis
ENSXMAG00000018379	wdr43	99	69.677	ENSCVAG00000016604	wdr43	98	69.194	Cyprinodon_variegatus
ENSXMAG00000018379	wdr43	100	70.229	ENSDARG00000077264	wdr43	99	69.659	Danio_rerio
ENSXMAG00000018379	wdr43	98	52.774	ENSDNOG00000018841	WDR43	89	54.649	Dasypus_novemcinctus
ENSXMAG00000018379	wdr43	99	49.629	ENSDORG00000000255	Wdr43	89	51.299	Dipodomys_ordii
ENSXMAG00000018379	wdr43	72	63.636	ENSETEG00000004853	WDR43	60	63.636	Echinops_telfairi
ENSXMAG00000018379	wdr43	91	43.515	ENSEBUG00000016586	wdr43	90	41.791	Eptatretus_burgeri
ENSXMAG00000018379	wdr43	98	52.232	ENSEASG00005009046	WDR43	89	54.397	Equus_asinus_asinus
ENSXMAG00000018379	wdr43	98	48.209	ENSECAG00000023777	WDR43	87	50.246	Equus_caballus
ENSXMAG00000018379	wdr43	85	61.818	ENSEEUG00000006044	WDR43	72	61.818	Erinaceus_europaeus
ENSXMAG00000018379	wdr43	100	76.994	ENSELUG00000019806	wdr43	94	77.138	Esox_lucius
ENSXMAG00000018379	wdr43	98	52.287	ENSFCAG00000018872	WDR43	89	53.976	Felis_catus
ENSXMAG00000018379	wdr43	88	54.932	ENSFALG00000011213	WDR43	99	52.048	Ficedula_albicollis
ENSXMAG00000018379	wdr43	98	52.474	ENSFDAG00000007446	WDR43	89	54.235	Fukomys_damarensis
ENSXMAG00000018379	wdr43	99	88.958	ENSFHEG00000021863	wdr43	99	89.114	Fundulus_heteroclitus
ENSXMAG00000018379	wdr43	97	77.251	ENSGMOG00000001695	wdr43	99	76.145	Gadus_morhua
ENSXMAG00000018379	wdr43	98	53.566	ENSGALG00000032529	WDR43	98	52.366	Gallus_gallus
ENSXMAG00000018379	wdr43	100	97.077	ENSGAFG00000019525	wdr43	100	97.077	Gambusia_affinis
ENSXMAG00000018379	wdr43	98	80.595	ENSGACG00000012843	wdr43	99	79.683	Gasterosteus_aculeatus
ENSXMAG00000018379	wdr43	98	52.616	ENSGGOG00000015956	WDR43	89	53.997	Gorilla_gorilla
ENSXMAG00000018379	wdr43	99	86.137	ENSHBUG00000011585	wdr43	95	85.358	Haplochromis_burtoni
ENSXMAG00000018379	wdr43	98	52.388	ENSHGLG00000006912	WDR43	89	54.235	Heterocephalus_glaber_female
ENSXMAG00000018379	wdr43	98	52.388	ENSHGLG00100007455	WDR43	89	54.235	Heterocephalus_glaber_male
ENSXMAG00000018379	wdr43	99	81.538	ENSHCOG00000001160	wdr43	98	80.967	Hippocampus_comes
ENSXMAG00000018379	wdr43	99	69.208	ENSIPUG00000015564	wdr43	99	69.335	Ictalurus_punctatus
ENSXMAG00000018379	wdr43	98	52.167	ENSSTOG00000014687	WDR43	89	54.085	Ictidomys_tridecemlineatus
ENSXMAG00000018379	wdr43	90	50.405	ENSJJAG00000012314	-	88	52.406	Jaculus_jaculus
ENSXMAG00000018379	wdr43	98	50.300	ENSJJAG00000016353	-	90	52.623	Jaculus_jaculus
ENSXMAG00000018379	wdr43	99	85.537	ENSKMAG00000009301	wdr43	99	85.848	Kryptolebias_marmoratus
ENSXMAG00000018379	wdr43	100	83.945	ENSLBEG00000022773	wdr43	99	84.186	Labrus_bergylta
ENSXMAG00000018379	wdr43	98	53.743	ENSLACG00000012425	WDR43	86	56.588	Latimeria_chalumnae
ENSXMAG00000018379	wdr43	89	54.653	ENSLAFG00000005457	WDR43	97	53.997	Loxodonta_africana
ENSXMAG00000018379	wdr43	98	52.395	ENSMFAG00000031243	WDR43	89	54.160	Macaca_fascicularis
ENSXMAG00000018379	wdr43	98	52.395	ENSMMUG00000022268	WDR43	89	54.160	Macaca_mulatta
ENSXMAG00000018379	wdr43	98	52.545	ENSMNEG00000035036	WDR43	95	54.010	Macaca_nemestrina
ENSXMAG00000018379	wdr43	90	51.307	ENSMLEG00000022852	WDR43	80	53.597	Mandrillus_leucophaeus
ENSXMAG00000018379	wdr43	99	83.101	ENSMAMG00000014056	wdr43	98	85.502	Mastacembelus_armatus
ENSXMAG00000018379	wdr43	99	85.670	ENSMZEG00005009095	wdr43	99	84.891	Maylandia_zebra
ENSXMAG00000018379	wdr43	88	53.990	ENSMGAG00000005248	WDR43	99	52.551	Meleagris_gallopavo
ENSXMAG00000018379	wdr43	98	48.225	ENSMAUG00000007339	Wdr43	89	50.404	Mesocricetus_auratus
ENSXMAG00000018379	wdr43	98	52.608	ENSMICG00000014276	WDR43	89	54.812	Microcebus_murinus
ENSXMAG00000018379	wdr43	98	52.985	ENSMOCG00000017279	Wdr43	90	54.323	Microtus_ochrogaster
ENSXMAG00000018379	wdr43	100	81.498	ENSMMOG00000004782	wdr43	99	80.930	Mola_mola
ENSXMAG00000018379	wdr43	98	51.935	ENSMODG00000015545	WDR43	91	53.514	Monodelphis_domestica
ENSXMAG00000018379	wdr43	69	78.022	ENSMALG00000007866	wdr43	98	76.432	Monopterus_albus
ENSXMAG00000018379	wdr43	98	52.679	MGP_CAROLIEiJ_G0021861	Wdr43	97	52.474	Mus_caroli
ENSXMAG00000018379	wdr43	98	52.530	ENSMUSG00000041057	Wdr43	96	52.782	Mus_musculus
ENSXMAG00000018379	wdr43	93	54.854	MGP_PahariEiJ_G0020848	Wdr43	89	54.397	Mus_pahari
ENSXMAG00000018379	wdr43	98	51.608	MGP_SPRETEiJ_G0022772	Wdr43	97	52.174	Mus_spretus
ENSXMAG00000018379	wdr43	98	52.530	ENSMPUG00000017985	WDR43	89	54.812	Mustela_putorius_furo
ENSXMAG00000018379	wdr43	99	50.448	ENSMLUG00000010666	WDR43	89	52.195	Myotis_lucifugus
ENSXMAG00000018379	wdr43	90	54.922	ENSNGAG00000004446	Wdr43	89	54.072	Nannospalax_galili
ENSXMAG00000018379	wdr43	99	86.293	ENSNBRG00000011062	wdr43	99	85.514	Neolamprologus_brichardi
ENSXMAG00000018379	wdr43	99	52.459	ENSNLEG00000015361	WDR43	90	54.221	Nomascus_leucogenys
ENSXMAG00000018379	wdr43	89	43.514	ENSOPRG00000007219	WDR43	91	44.784	Ochotona_princeps
ENSXMAG00000018379	wdr43	89	55.068	ENSODEG00000006870	WDR43	89	54.560	Octodon_degus
ENSXMAG00000018379	wdr43	99	85.604	ENSONIG00000019540	wdr43	99	84.211	Oreochromis_niloticus
ENSXMAG00000018379	wdr43	89	53.422	ENSOANG00000014467	WDR43	93	54.775	Ornithorhynchus_anatinus
ENSXMAG00000018379	wdr43	88	56.491	ENSOCUG00000003126	WDR43	87	54.902	Oryctolagus_cuniculus
ENSXMAG00000018379	wdr43	99	81.804	ENSORLG00000018236	wdr43	99	81.804	Oryzias_latipes
ENSXMAG00000018379	wdr43	99	81.182	ENSORLG00020008182	wdr43	99	81.182	Oryzias_latipes_hni
ENSXMAG00000018379	wdr43	99	81.182	ENSORLG00015005256	wdr43	99	81.182	Oryzias_latipes_hsok
ENSXMAG00000018379	wdr43	99	80.620	ENSOMEG00000009928	wdr43	90	80.930	Oryzias_melastigma
ENSXMAG00000018379	wdr43	98	52.459	ENSOGAG00000009879	WDR43	86	55.049	Otolemur_garnettii
ENSXMAG00000018379	wdr43	73	50.791	ENSOARG00000019566	WDR43	99	50.298	Ovis_aries
ENSXMAG00000018379	wdr43	89	51.316	ENSPPAG00000041978	WDR43	91	53.430	Pan_paniscus
ENSXMAG00000018379	wdr43	98	53.438	ENSPPRG00000001900	WDR43	90	54.669	Panthera_pardus
ENSXMAG00000018379	wdr43	98	51.403	ENSPTIG00000005982	WDR43	86	53.976	Panthera_tigris_altaica
ENSXMAG00000018379	wdr43	98	52.324	ENSPTRG00000011792	WDR43	89	54.323	Pan_troglodytes
ENSXMAG00000018379	wdr43	98	52.395	ENSPANG00000018846	WDR43	94	53.846	Papio_anubis
ENSXMAG00000018379	wdr43	100	69.138	ENSPKIG00000022935	wdr43	99	69.018	Paramormyrops_kingsleyae
ENSXMAG00000018379	wdr43	73	50.688	ENSPSIG00000014217	WDR43	89	54.545	Pelodiscus_sinensis
ENSXMAG00000018379	wdr43	100	77.727	ENSPMGG00000001169	wdr43	98	78.125	Periophthalmus_magnuspinnatus
ENSXMAG00000018379	wdr43	98	52.239	ENSPEMG00000021715	Wdr43	89	53.519	Peromyscus_maniculatus_bairdii
ENSXMAG00000018379	wdr43	88	49.650	ENSPMAG00000006054	wdr43	98	49.324	Petromyzon_marinus
ENSXMAG00000018379	wdr43	88	54.306	ENSPCIG00000011948	WDR43	96	53.355	Phascolarctos_cinereus
ENSXMAG00000018379	wdr43	99	96.256	ENSPFOG00000011371	wdr43	99	96.256	Poecilia_formosa
ENSXMAG00000018379	wdr43	99	96.256	ENSPLAG00000002041	wdr43	99	96.256	Poecilia_latipinna
ENSXMAG00000018379	wdr43	99	96.412	ENSPMEG00000020902	wdr43	99	96.412	Poecilia_mexicana
ENSXMAG00000018379	wdr43	99	94.548	ENSPREG00000004959	wdr43	99	95.327	Poecilia_reticulata
ENSXMAG00000018379	wdr43	98	52.545	ENSPPYG00000012526	WDR43	84	54.649	Pongo_abelii
ENSXMAG00000018379	wdr43	89	52.715	ENSPCAG00000011610	WDR43	80	52.715	Procavia_capensis
ENSXMAG00000018379	wdr43	98	52.310	ENSPCOG00000000476	WDR43	89	54.649	Propithecus_coquereli
ENSXMAG00000018379	wdr43	98	47.910	ENSPVAG00000013850	WDR43	84	49.266	Pteropus_vampyrus
ENSXMAG00000018379	wdr43	99	85.981	ENSPNYG00000023080	wdr43	99	85.202	Pundamilia_nyererei
ENSXMAG00000018379	wdr43	99	69.909	ENSPNAG00000023664	wdr43	91	72.204	Pygocentrus_nattereri
ENSXMAG00000018379	wdr43	98	53.134	ENSRNOG00000026316	Wdr43	89	54.501	Rattus_norvegicus
ENSXMAG00000018379	wdr43	98	52.752	ENSRBIG00000026670	WDR43	89	54.649	Rhinopithecus_bieti
ENSXMAG00000018379	wdr43	98	52.545	ENSRROG00000035929	WDR43	89	54.649	Rhinopithecus_roxellana
ENSXMAG00000018379	wdr43	98	52.994	ENSSBOG00000021596	WDR43	89	54.812	Saimiri_boliviensis_boliviensis
ENSXMAG00000018379	wdr43	94	51.888	ENSSHAG00000009672	WDR43	94	51.270	Sarcophilus_harrisii
ENSXMAG00000018379	wdr43	100	52.366	ENSSFOG00015004013	-	95	52.640	Scleropages_formosus
ENSXMAG00000018379	wdr43	100	70.865	ENSSFOG00015007173	wdr43	89	70.308	Scleropages_formosus
ENSXMAG00000018379	wdr43	97	82.381	ENSSMAG00000015328	wdr43	97	82.063	Scophthalmus_maximus
ENSXMAG00000018379	wdr43	99	84.472	ENSSDUG00000018532	wdr43	99	84.472	Seriola_dumerili
ENSXMAG00000018379	wdr43	94	85.386	ENSSLDG00000015626	wdr43	98	85.386	Seriola_lalandi_dorsalis
ENSXMAG00000018379	wdr43	72	59.657	ENSSARG00000013358	WDR43	75	59.657	Sorex_araneus
ENSXMAG00000018379	wdr43	99	53.731	ENSSPUG00000006260	WDR43	92	55.167	Sphenodon_punctatus
ENSXMAG00000018379	wdr43	93	85.667	ENSSPAG00000002830	wdr43	95	85.667	Stegastes_partitus
ENSXMAG00000018379	wdr43	98	52.012	ENSSSCG00000008536	WDR43	97	51.647	Sus_scrofa
ENSXMAG00000018379	wdr43	91	55.483	ENSTGUG00000005464	WDR43	94	55.429	Taeniopygia_guttata
ENSXMAG00000018379	wdr43	99	78.538	ENSTRUG00000009764	wdr43	99	78.072	Takifugu_rubripes
ENSXMAG00000018379	wdr43	99	78.053	ENSTNIG00000008907	wdr43	99	78.362	Tetraodon_nigroviridis
ENSXMAG00000018379	wdr43	80	54.614	ENSTBEG00000007577	WDR43	99	54.442	Tupaia_belangeri
ENSXMAG00000018379	wdr43	89	51.645	ENSTTRG00000008268	WDR43	76	53.249	Tursiops_truncatus
ENSXMAG00000018379	wdr43	98	51.637	ENSUAMG00000015504	WDR43	89	53.997	Ursus_americanus
ENSXMAG00000018379	wdr43	98	51.637	ENSUMAG00000020071	WDR43	89	53.997	Ursus_maritimus
ENSXMAG00000018379	wdr43	72	47.977	ENSVPAG00000001632	WDR43	60	48.872	Vicugna_pacos
ENSXMAG00000018379	wdr43	89	54.822	ENSVVUG00000002890	WDR43	96	53.846	Vulpes_vulpes
ENSXMAG00000018379	wdr43	100	99.681	ENSXCOG00000011240	wdr43	100	99.681	Xiphophorus_couchianus