EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018406 (Gene tree)
Gene ID: 102237193
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15803 bases
Position: chr18:24083054-24098856
Accession: 102237193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018483	NMD3	PF04981.13	1.8e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018511	-	2006	XM_005807997	ENSXMAP00000018483	504 (aa)	XP_005808054	M4AVI8

Gene Model

Click here to download ENSXMAG00000018406's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018406	nmd3	99	76.786	ENSG00000169251	NMD3	100	78.899	Homo_sapiens
ENSXMAG00000018406	nmd3	100	95.437	ENSAPOG00000022912	nmd3	100	95.437	Acanthochromis_polyacanthus
ENSXMAG00000018406	nmd3	99	77.624	ENSAMEG00000001584	NMD3	99	77.624	Ailuropoda_melanoleuca
ENSXMAG00000018406	nmd3	100	89.484	ENSACIG00000015196	nmd3	100	89.484	Amphilophus_citrinellus
ENSXMAG00000018406	nmd3	100	96.032	ENSAOCG00000009086	nmd3	100	96.032	Amphiprion_ocellaris
ENSXMAG00000018406	nmd3	100	95.635	ENSAPEG00000000329	nmd3	100	95.635	Amphiprion_percula
ENSXMAG00000018406	nmd3	100	95.437	ENSATEG00000014351	nmd3	100	95.437	Anabas_testudineus
ENSXMAG00000018406	nmd3	100	76.832	ENSAPLG00000014786	NMD3	100	76.832	Anas_platyrhynchos
ENSXMAG00000018406	nmd3	100	79.802	ENSACAG00000007349	NMD3	100	79.802	Anolis_carolinensis
ENSXMAG00000018406	nmd3	99	77.154	ENSANAG00000026434	NMD3	99	77.154	Aotus_nancymaae
ENSXMAG00000018406	nmd3	100	95.238	ENSACLG00000015520	nmd3	100	95.238	Astatotilapia_calliptera
ENSXMAG00000018406	nmd3	100	90.675	ENSAMXG00000014415	nmd3	100	90.675	Astyanax_mexicanus
ENSXMAG00000018406	nmd3	99	76.587	ENSBTAG00000016228	NMD3	100	76.587	Bos_taurus
ENSXMAG00000018406	nmd3	96	50.000	WBGene00012030	T25G3.3	96	50.000	Caenorhabditis_elegans
ENSXMAG00000018406	nmd3	99	77.510	ENSCJAG00000002900	NMD3	97	77.510	Callithrix_jacchus
ENSXMAG00000018406	nmd3	99	76.305	ENSCAFG00000014352	NMD3	97	76.305	Canis_familiaris
ENSXMAG00000018406	nmd3	99	75.992	ENSCAFG00020021145	NMD3	99	75.992	Canis_lupus_dingo
ENSXMAG00000018406	nmd3	99	76.786	ENSCHIG00000016015	NMD3	100	76.786	Capra_hircus
ENSXMAG00000018406	nmd3	99	76.786	ENSTSYG00000002155	NMD3	99	76.786	Carlito_syrichta
ENSXMAG00000018406	nmd3	79	75.750	ENSCAPG00000017861	NMD3	93	75.750	Cavia_aperea
ENSXMAG00000018406	nmd3	87	76.430	ENSCPOG00000005953	NMD3	94	76.430	Cavia_porcellus
ENSXMAG00000018406	nmd3	99	76.786	ENSCCAG00000037460	NMD3	100	76.786	Cebus_capucinus
ENSXMAG00000018406	nmd3	99	77.381	ENSCATG00000030022	NMD3	100	77.381	Cercocebus_atys
ENSXMAG00000018406	nmd3	99	76.984	ENSCLAG00000003155	NMD3	100	76.984	Chinchilla_lanigera
ENSXMAG00000018406	nmd3	99	77.381	ENSCSAG00000012333	NMD3	100	77.381	Chlorocebus_sabaeus
ENSXMAG00000018406	nmd3	80	76.408	ENSCHOG00000001240	NMD3	80	76.408	Choloepus_hoffmanni
ENSXMAG00000018406	nmd3	99	81.548	ENSCPBG00000018318	NMD3	99	81.857	Chrysemys_picta_bellii
ENSXMAG00000018406	nmd3	97	54.286	ENSCING00000002129	-	97	54.286	Ciona_intestinalis
ENSXMAG00000018406	nmd3	87	54.545	ENSCSAVG00000001120	-	97	54.545	Ciona_savignyi
ENSXMAG00000018406	nmd3	99	71.769	ENSCANG00000042939	NMD3	95	71.372	Colobus_angolensis_palliatus
ENSXMAG00000018406	nmd3	91	67.462	ENSCGRG00001001792	Nmd3	97	67.462	Cricetulus_griseus_chok1gshd
ENSXMAG00000018406	nmd3	97	76.986	ENSCGRG00000007947	Nmd3	98	76.986	Cricetulus_griseus_crigri
ENSXMAG00000018406	nmd3	100	92.857	ENSCSEG00000017954	nmd3	100	92.857	Cynoglossus_semilaevis
ENSXMAG00000018406	nmd3	100	86.310	ENSCVAG00000004672	nmd3	100	86.310	Cyprinodon_variegatus
ENSXMAG00000018406	nmd3	100	86.535	ENSDARG00000015676	nmd3	100	86.535	Danio_rerio
ENSXMAG00000018406	nmd3	99	76.190	ENSDNOG00000045222	NMD3	100	76.190	Dasypus_novemcinctus
ENSXMAG00000018406	nmd3	97	69.939	ENSDORG00000005716	Nmd3	100	69.737	Dipodomys_ordii
ENSXMAG00000018406	nmd3	98	54.890	FBgn0023542	Nmd3	96	54.691	Drosophila_melanogaster
ENSXMAG00000018406	nmd3	99	67.262	ENSETEG00000003168	NMD3	99	67.262	Echinops_telfairi
ENSXMAG00000018406	nmd3	89	59.465	ENSEBUG00000014316	nmd3	97	59.465	Eptatretus_burgeri
ENSXMAG00000018406	nmd3	99	76.786	ENSEASG00005018672	NMD3	100	76.786	Equus_asinus_asinus
ENSXMAG00000018406	nmd3	99	77.108	ENSECAG00000000188	NMD3	97	77.108	Equus_caballus
ENSXMAG00000018406	nmd3	94	56.992	ENSEEUG00000010642	-	100	56.992	Erinaceus_europaeus
ENSXMAG00000018406	nmd3	100	89.286	ENSELUG00000024123	nmd3	100	89.286	Esox_lucius
ENSXMAG00000018406	nmd3	99	77.510	ENSFCAG00000022867	NMD3	99	77.381	Felis_catus
ENSXMAG00000018406	nmd3	94	79.789	ENSFALG00000008711	NMD3	100	79.789	Ficedula_albicollis
ENSXMAG00000018406	nmd3	99	75.842	ENSFDAG00000013724	-	100	75.842	Fukomys_damarensis
ENSXMAG00000018406	nmd3	97	64.909	ENSFDAG00000012197	-	98	65.092	Fukomys_damarensis
ENSXMAG00000018406	nmd3	100	95.635	ENSFHEG00000000415	nmd3	100	95.635	Fundulus_heteroclitus
ENSXMAG00000018406	nmd3	97	87.526	ENSGMOG00000009675	nmd3	100	87.526	Gadus_morhua
ENSXMAG00000018406	nmd3	100	79.010	ENSGALG00000009533	NMD3	100	79.010	Gallus_gallus
ENSXMAG00000018406	nmd3	99	98.994	ENSGAFG00000012798	nmd3	94	98.994	Gambusia_affinis
ENSXMAG00000018406	nmd3	100	91.667	ENSGACG00000010028	nmd3	100	91.667	Gasterosteus_aculeatus
ENSXMAG00000018406	nmd3	99	80.952	ENSGAGG00000006556	NMD3	99	80.952	Gopherus_agassizii
ENSXMAG00000018406	nmd3	99	62.425	ENSGGOG00000028590	-	99	62.425	Gorilla_gorilla
ENSXMAG00000018406	nmd3	99	77.183	ENSGGOG00000007157	NMD3	100	77.183	Gorilla_gorilla
ENSXMAG00000018406	nmd3	100	95.238	ENSHBUG00000001781	nmd3	100	95.238	Haplochromis_burtoni
ENSXMAG00000018406	nmd3	99	76.786	ENSHGLG00000014451	-	100	76.786	Heterocephalus_glaber_female
ENSXMAG00000018406	nmd3	99	62.698	ENSHGLG00000010477	-	100	62.698	Heterocephalus_glaber_female
ENSXMAG00000018406	nmd3	99	76.786	ENSHGLG00100006613	-	100	76.786	Heterocephalus_glaber_male
ENSXMAG00000018406	nmd3	99	62.897	ENSHGLG00100001042	-	100	62.897	Heterocephalus_glaber_male
ENSXMAG00000018406	nmd3	99	90.837	ENSHCOG00000004292	nmd3	92	90.837	Hippocampus_comes
ENSXMAG00000018406	nmd3	100	86.706	ENSIPUG00000005073	nmd3	100	86.706	Ictalurus_punctatus
ENSXMAG00000018406	nmd3	99	77.381	ENSSTOG00000001899	NMD3	100	77.381	Ictidomys_tridecemlineatus
ENSXMAG00000018406	nmd3	97	77.914	ENSJJAG00000019759	Nmd3	99	77.914	Jaculus_jaculus
ENSXMAG00000018406	nmd3	100	94.841	ENSKMAG00000020427	nmd3	100	94.841	Kryptolebias_marmoratus
ENSXMAG00000018406	nmd3	100	92.095	ENSLBEG00000022216	nmd3	100	92.095	Labrus_bergylta
ENSXMAG00000018406	nmd3	99	77.355	ENSLACG00000005731	NMD3	99	81.007	Latimeria_chalumnae
ENSXMAG00000018406	nmd3	100	87.723	ENSLOCG00000003561	nmd3	100	87.723	Lepisosteus_oculatus
ENSXMAG00000018406	nmd3	99	75.050	ENSLAFG00000007231	NMD3	100	75.050	Loxodonta_africana
ENSXMAG00000018406	nmd3	99	77.381	ENSMFAG00000040934	NMD3	100	77.381	Macaca_fascicularis
ENSXMAG00000018406	nmd3	99	76.541	ENSMMUG00000009564	NMD3	99	76.603	Macaca_mulatta
ENSXMAG00000018406	nmd3	99	77.381	ENSMNEG00000034626	NMD3	100	77.381	Macaca_nemestrina
ENSXMAG00000018406	nmd3	88	77.928	ENSMLEG00000002741	NMD3	100	77.928	Mandrillus_leucophaeus
ENSXMAG00000018406	nmd3	100	93.056	ENSMAMG00000012427	nmd3	100	93.056	Mastacembelus_armatus
ENSXMAG00000018406	nmd3	100	95.238	ENSMZEG00005016888	nmd3	100	95.238	Maylandia_zebra
ENSXMAG00000018406	nmd3	100	79.010	ENSMGAG00000010498	NMD3	100	79.010	Meleagris_gallopavo
ENSXMAG00000018406	nmd3	99	76.190	ENSMAUG00000000633	Nmd3	100	76.190	Mesocricetus_auratus
ENSXMAG00000018406	nmd3	99	76.786	ENSMICG00000049196	NMD3	100	76.786	Microcebus_murinus
ENSXMAG00000018406	nmd3	99	76.143	ENSMOCG00000005180	Nmd3	100	76.143	Microtus_ochrogaster
ENSXMAG00000018406	nmd3	100	92.673	ENSMMOG00000012765	nmd3	100	92.673	Mola_mola
ENSXMAG00000018406	nmd3	99	63.127	ENSMODG00000016296	NMD3	100	62.500	Monodelphis_domestica
ENSXMAG00000018406	nmd3	100	94.444	ENSMALG00000009256	nmd3	100	94.444	Monopterus_albus
ENSXMAG00000018406	nmd3	99	76.190	MGP_CAROLIEiJ_G0025069	Nmd3	100	76.190	Mus_caroli
ENSXMAG00000018406	nmd3	99	76.190	ENSMUSG00000027787	Nmd3	100	76.190	Mus_musculus
ENSXMAG00000018406	nmd3	99	76.190	MGP_PahariEiJ_G0026512	Nmd3	100	76.190	Mus_pahari
ENSXMAG00000018406	nmd3	99	76.389	MGP_SPRETEiJ_G0026011	Nmd3	100	76.389	Mus_spretus
ENSXMAG00000018406	nmd3	99	77.381	ENSMPUG00000002955	NMD3	99	77.381	Mustela_putorius_furo
ENSXMAG00000018406	nmd3	97	74.593	ENSMLUG00000000701	NMD3	97	74.593	Myotis_lucifugus
ENSXMAG00000018406	nmd3	99	76.342	ENSNGAG00000012307	Nmd3	99	76.342	Nannospalax_galili
ENSXMAG00000018406	nmd3	100	94.246	ENSNBRG00000003324	nmd3	100	94.246	Neolamprologus_brichardi
ENSXMAG00000018406	nmd3	99	76.984	ENSNLEG00000004655	NMD3	100	76.984	Nomascus_leucogenys
ENSXMAG00000018406	nmd3	73	67.544	ENSOPRG00000007690	-	73	67.544	Ochotona_princeps
ENSXMAG00000018406	nmd3	99	77.183	ENSODEG00000006270	NMD3	100	77.183	Octodon_degus
ENSXMAG00000018406	nmd3	100	94.841	ENSONIG00000003643	nmd3	100	94.841	Oreochromis_niloticus
ENSXMAG00000018406	nmd3	99	76.248	ENSOCUG00000017454	NMD3	100	76.248	Oryctolagus_cuniculus
ENSXMAG00000018406	nmd3	100	93.452	ENSORLG00000006279	nmd3	100	93.452	Oryzias_latipes
ENSXMAG00000018406	nmd3	100	93.254	ENSORLG00020003843	nmd3	100	93.254	Oryzias_latipes_hni
ENSXMAG00000018406	nmd3	100	92.857	ENSORLG00015006379	nmd3	100	92.857	Oryzias_latipes_hsok
ENSXMAG00000018406	nmd3	100	94.444	ENSOMEG00000012144	nmd3	100	94.444	Oryzias_melastigma
ENSXMAG00000018406	nmd3	99	77.183	ENSOGAG00000014910	NMD3	100	77.183	Otolemur_garnettii
ENSXMAG00000018406	nmd3	99	77.000	ENSOARG00000001883	NMD3	97	77.000	Ovis_aries
ENSXMAG00000018406	nmd3	99	76.786	ENSPPAG00000043829	NMD3	100	76.786	Pan_paniscus
ENSXMAG00000018406	nmd3	99	77.756	ENSPPRG00000000724	NMD3	97	77.756	Panthera_pardus
ENSXMAG00000018406	nmd3	99	77.183	ENSPTIG00000016761	NMD3	99	77.183	Panthera_tigris_altaica
ENSXMAG00000018406	nmd3	99	76.786	ENSPTRG00000015586	NMD3	100	76.786	Pan_troglodytes
ENSXMAG00000018406	nmd3	99	76.541	ENSPANG00000006665	NMD3	95	76.541	Papio_anubis
ENSXMAG00000018406	nmd3	100	88.294	ENSPKIG00000009928	nmd3	100	88.294	Paramormyrops_kingsleyae
ENSXMAG00000018406	nmd3	100	80.792	ENSPSIG00000007591	NMD3	100	80.792	Pelodiscus_sinensis
ENSXMAG00000018406	nmd3	100	87.897	ENSPMGG00000014015	nmd3	100	87.897	Periophthalmus_magnuspinnatus
ENSXMAG00000018406	nmd3	99	76.587	ENSPEMG00000021880	Nmd3	100	76.587	Peromyscus_maniculatus_bairdii
ENSXMAG00000018406	nmd3	99	80.159	ENSPCIG00000020869	NMD3	100	80.159	Phascolarctos_cinereus
ENSXMAG00000018406	nmd3	100	98.413	ENSPFOG00000012103	nmd3	100	98.413	Poecilia_formosa
ENSXMAG00000018406	nmd3	100	98.611	ENSPLAG00000008087	nmd3	100	98.611	Poecilia_latipinna
ENSXMAG00000018406	nmd3	100	98.413	ENSPMEG00000008506	nmd3	100	98.413	Poecilia_mexicana
ENSXMAG00000018406	nmd3	100	99.008	ENSPREG00000001848	nmd3	100	99.008	Poecilia_reticulata
ENSXMAG00000018406	nmd3	99	76.984	ENSPPYG00000014263	NMD3	100	76.984	Pongo_abelii
ENSXMAG00000018406	nmd3	91	64.130	ENSPCAG00000009851	NMD3	100	64.130	Procavia_capensis
ENSXMAG00000018406	nmd3	85	73.950	ENSPVAG00000003301	NMD3	85	73.950	Pteropus_vampyrus
ENSXMAG00000018406	nmd3	100	95.040	ENSPNYG00000006778	nmd3	100	95.040	Pundamilia_nyererei
ENSXMAG00000018406	nmd3	100	89.087	ENSPNAG00000009442	nmd3	100	89.087	Pygocentrus_nattereri
ENSXMAG00000018406	nmd3	99	75.595	ENSRNOG00000009310	Nmd3	100	75.595	Rattus_norvegicus
ENSXMAG00000018406	nmd3	99	73.016	ENSRBIG00000040379	NMD3	100	73.016	Rhinopithecus_bieti
ENSXMAG00000018406	nmd3	99	76.786	ENSRROG00000036181	NMD3	100	76.786	Rhinopithecus_roxellana
ENSXMAG00000018406	nmd3	94	44.266	YHR170W	NMD3	94	44.467	Saccharomyces_cerevisiae
ENSXMAG00000018406	nmd3	99	76.200	ENSSBOG00000024021	NMD3	99	76.200	Saimiri_boliviensis_boliviensis
ENSXMAG00000018406	nmd3	99	74.206	ENSSHAG00000016044	NMD3	100	74.206	Sarcophilus_harrisii
ENSXMAG00000018406	nmd3	100	89.484	ENSSFOG00015003609	nmd3	100	89.484	Scleropages_formosus
ENSXMAG00000018406	nmd3	100	92.659	ENSSMAG00000012887	nmd3	100	92.659	Scophthalmus_maximus
ENSXMAG00000018406	nmd3	100	95.238	ENSSDUG00000023721	nmd3	100	95.238	Seriola_dumerili
ENSXMAG00000018406	nmd3	100	95.040	ENSSLDG00000006565	nmd3	100	95.040	Seriola_lalandi_dorsalis
ENSXMAG00000018406	nmd3	97	77.710	ENSSARG00000010402	NMD3	99	77.710	Sorex_araneus
ENSXMAG00000018406	nmd3	99	79.400	ENSSPUG00000018791	NMD3	100	79.400	Sphenodon_punctatus
ENSXMAG00000018406	nmd3	100	94.841	ENSSPAG00000014328	nmd3	100	94.841	Stegastes_partitus
ENSXMAG00000018406	nmd3	99	76.506	ENSSSCG00000022952	NMD3	100	76.389	Sus_scrofa
ENSXMAG00000018406	nmd3	99	79.762	ENSTGUG00000011140	-	100	79.762	Taeniopygia_guttata
ENSXMAG00000018406	nmd3	91	78.091	ENSTGUG00000015141	-	100	78.091	Taeniopygia_guttata
ENSXMAG00000018406	nmd3	100	92.460	ENSTRUG00000005958	nmd3	100	92.460	Takifugu_rubripes
ENSXMAG00000018406	nmd3	99	55.754	ENSTBEG00000011783	-	100	55.754	Tupaia_belangeri
ENSXMAG00000018406	nmd3	99	72.024	ENSTTRG00000012938	NMD3	100	72.024	Tursiops_truncatus
ENSXMAG00000018406	nmd3	82	76.399	ENSUAMG00000009305	-	99	77.612	Ursus_americanus
ENSXMAG00000018406	nmd3	99	77.756	ENSUMAG00000011070	NMD3	99	77.711	Ursus_maritimus
ENSXMAG00000018406	nmd3	99	75.992	ENSVPAG00000008779	NMD3	100	75.992	Vicugna_pacos
ENSXMAG00000018406	nmd3	99	76.506	ENSVVUG00000023055	NMD3	99	76.506	Vulpes_vulpes
ENSXMAG00000018406	nmd3	100	80.990	ENSXETG00000027727	nmd3	100	80.990	Xenopus_tropicalis
ENSXMAG00000018406	nmd3	70	95.023	ENSXCOG00000012490	nmd3	83	99.533	Xiphophorus_couchianus