EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000018464 (Gene tree)
Gene ID
111609934
Gene Symbol
patl2
Alias
si:ch211-103b1.2
Full Name
PAT1 homolog 2
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
11629 bases
Position
chr10:4176766-4188394
Accession
111609934
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000018506PAT1PF09770.92.7e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000018534-2755XM_023341423ENSXMAP00000018506707 (aa)XP_023197191M4AVL1
Gene Model
Click here to download ENSXMAG00000018464's gene model file
Pathways
Pathway IDPathway NameSource
xma03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018464's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000018464patl25844.419ENSG00000229474PATL29946.721Homo_sapiens
ENSXMAG00000018464patl25436.456ENSAPOG00000021290patl15437.215Acanthochromis_polyacanthus
ENSXMAG00000018464patl29576.289ENSAPOG00000022988patl210076.618Acanthochromis_polyacanthus
ENSXMAG00000018464patl25845.902ENSAMEG00000014997PATL28045.902Ailuropoda_melanoleuca
ENSXMAG00000018464patl25437.468ENSACIG00000005182patl16734.843Amphilophus_citrinellus
ENSXMAG00000018464patl25436.203ENSAOCG00000021993patl15137.215Amphiprion_ocellaris
ENSXMAG00000018464patl210075.800ENSAOCG00000023738patl29476.521Amphiprion_ocellaris
ENSXMAG00000018464patl28583.864ENSAPEG00000011299patl29883.864Amphiprion_percula
ENSXMAG00000018464patl29568.668ENSATEG00000019567patl210068.228Anabas_testudineus
ENSXMAG00000018464patl28243.883ENSAPLG00000003980PATL29844.698Anas_platyrhynchos
ENSXMAG00000018464patl29331.137ENSACAG00000006607PATL15936.876Anolis_carolinensis
ENSXMAG00000018464patl25146.883ENSANAG00000022701PATL27744.084Aotus_nancymaae
ENSXMAG00000018464patl25436.627ENSANAG00000023078PATL19730.191Aotus_nancymaae
ENSXMAG00000018464patl210072.665ENSACLG00000010326patl29873.380Astatotilapia_calliptera
ENSXMAG00000018464patl25436.548ENSACLG00000005144patl15235.747Astatotilapia_calliptera
ENSXMAG00000018464patl210053.030ENSAMXG00000020293patl29853.791Astyanax_mexicanus
ENSXMAG00000018464patl25436.090ENSAMXG00000010731patl15635.514Astyanax_mexicanus
ENSXMAG00000018464patl25046.260ENSBTAG00000001558PATL29946.260Bos_taurus
ENSXMAG00000018464patl25844.266ENSCJAG00000002379PATL27744.266Callithrix_jacchus
ENSXMAG00000018464patl25436.627ENSCJAG00000016192PATL19730.140Callithrix_jacchus
ENSXMAG00000018464patl25447.407ENSCAFG00000013629PATL27247.407Canis_familiaris
ENSXMAG00000018464patl25447.407ENSCAFG00020022169PATL27247.407Canis_lupus_dingo
ENSXMAG00000018464patl29330.628ENSCAFG00020001648PATL19730.668Canis_lupus_dingo
ENSXMAG00000018464patl26542.259ENSCHIG00000026665PATL28642.918Capra_hircus
ENSXMAG00000018464patl25436.627ENSTSYG00000012748PATL19331.126Carlito_syrichta
ENSXMAG00000018464patl26045.147ENSTSYG00000032456PATL27945.147Carlito_syrichta
ENSXMAG00000018464patl25737.215ENSCPOG00000006827PATL16935.072Cavia_porcellus
ENSXMAG00000018464patl25145.777ENSCCAG00000025261PATL27743.981Cebus_capucinus
ENSXMAG00000018464patl25146.594ENSCATG00000034794PATL29946.448Cercocebus_atys
ENSXMAG00000018464patl25536.905ENSCLAG00000003427PATL19830.230Chinchilla_lanigera
ENSXMAG00000018464patl25443.596ENSCLAG00000014407PATL27742.965Chinchilla_lanigera
ENSXMAG00000018464patl25146.322ENSCSAG00000009601PATL27744.186Chlorocebus_sabaeus
ENSXMAG00000018464patl25436.627ENSCSAG00000006095PATL16736.229Chlorocebus_sabaeus
ENSXMAG00000018464patl25436.842ENSCHOG00000001611PATL16537.560Choloepus_hoffmanni
ENSXMAG00000018464patl27446.570ENSCPBG00000006150PATL28246.570Chrysemys_picta_bellii
ENSXMAG00000018464patl25844.471ENSCANG00000013856PATL27744.471Colobus_angolensis_palliatus
ENSXMAG00000018464patl25437.108ENSCGRG00001024927Patl19730.153Cricetulus_griseus_chok1gshd
ENSXMAG00000018464patl26044.318ENSCGRG00001010801Patl28443.981Cricetulus_griseus_chok1gshd
ENSXMAG00000018464patl26044.318ENSCGRG00000013007Patl28443.981Cricetulus_griseus_crigri
ENSXMAG00000018464patl25437.108ENSCGRG00000000461Patl19830.153Cricetulus_griseus_crigri
ENSXMAG00000018464patl25435.949ENSCSEG00000008261patl17034.055Cynoglossus_semilaevis
ENSXMAG00000018464patl28773.539ENSCSEG00000009438patl28874.333Cynoglossus_semilaevis
ENSXMAG00000018464patl28473.441ENSCVAG00000016203patl29373.441Cyprinodon_variegatus
ENSXMAG00000018464patl25435.354ENSCVAG00000006664patl15335.354Cyprinodon_variegatus
ENSXMAG00000018464patl28260.136ENSDARG00000089567patl29856.303Danio_rerio
ENSXMAG00000018464patl25835.697ENSDARG00000017423patl15435.697Danio_rerio
ENSXMAG00000018464patl25844.884ENSDNOG00000036837PATL27144.907Dasypus_novemcinctus
ENSXMAG00000018464patl25435.904ENSDNOG00000038865PATL18535.518Dasypus_novemcinctus
ENSXMAG00000018464patl25545.926ENSDORG00000026649Patl27745.340Dipodomys_ordii
ENSXMAG00000018464patl25045.682ENSETEG00000005068PATL29945.682Echinops_telfairi
ENSXMAG00000018464patl25146.027ENSEASG00005017984PATL27444.444Equus_asinus_asinus
ENSXMAG00000018464patl25435.749ENSEASG00005007963PATL19730.464Equus_asinus_asinus
ENSXMAG00000018464patl25436.077ENSECAG00000011411PATL19530.341Equus_caballus
ENSXMAG00000018464patl25147.268ENSECAG00000013462PATL27545.519Equus_caballus
ENSXMAG00000018464patl25436.709ENSELUG00000024249patl15535.402Esox_lucius
ENSXMAG00000018464patl210061.859ENSELUG00000023244patl29862.659Esox_lucius
ENSXMAG00000018464patl25436.145ENSFCAG00000015573PATL19730.357Felis_catus
ENSXMAG00000018464patl25746.118ENSFCAG00000027170PATL27746.512Felis_catus
ENSXMAG00000018464patl28243.274ENSFALG00000009768PATL29939.777Ficedula_albicollis
ENSXMAG00000018464patl25538.571ENSFALG00000012150PATL15538.571Ficedula_albicollis
ENSXMAG00000018464patl25244.444ENSFDAG00000012242PATL26944.258Fukomys_damarensis
ENSXMAG00000018464patl25538.095ENSFDAG00000016128PATL19830.977Fukomys_damarensis
ENSXMAG00000018464patl27386.293ENSFHEG00000009727patl29986.293Fundulus_heteroclitus
ENSXMAG00000018464patl25968.235ENSGMOG00000005666patl29968.483Gadus_morhua
ENSXMAG00000018464patl28240.943ENSGALG00000002167PATL29739.186Gallus_gallus
ENSXMAG00000018464patl25536.085ENSGALG00000042641PATL15836.465Gallus_gallus
ENSXMAG00000018464patl210094.076ENSGAFG00000019344patl29895.546Gambusia_affinis
ENSXMAG00000018464patl25435.606ENSGACG00000016448patl15236.683Gasterosteus_aculeatus
ENSXMAG00000018464patl29330.830ENSGAGG00000004461PATL19731.447Gopherus_agassizii
ENSXMAG00000018464patl25436.145ENSGGOG00000004335PATL19830.378Gorilla_gorilla
ENSXMAG00000018464patl25844.419ENSGGOG00000025923PATL27744.419Gorilla_gorilla
ENSXMAG00000018464patl25436.548ENSHBUG00000005365patl15235.747Haplochromis_burtoni
ENSXMAG00000018464patl29472.830ENSHBUG00000005929patl29864.151Haplochromis_burtoni
ENSXMAG00000018464patl25537.619ENSHGLG00000018173PATL19730.740Heterocephalus_glaber_female
ENSXMAG00000018464patl25243.878ENSHGLG00100008419-7243.421Heterocephalus_glaber_male
ENSXMAG00000018464patl25537.619ENSHGLG00100003453PATL19830.612Heterocephalus_glaber_male
ENSXMAG00000018464patl210070.225ENSHCOG00000016754patl29871.655Hippocampus_comes
ENSXMAG00000018464patl25436.203ENSHCOG00000001898patl15235.308Hippocampus_comes
ENSXMAG00000018464patl210052.999ENSIPUG00000020692patl29853.759Ictalurus_punctatus
ENSXMAG00000018464patl26144.196ENSSTOG00000033848PATL28144.592Ictidomys_tridecemlineatus
ENSXMAG00000018464patl210078.661ENSKMAG00000021275patl29878.977Kryptolebias_marmoratus
ENSXMAG00000018464patl210074.588ENSLBEG00000022344patl29875.105Labrus_bergylta
ENSXMAG00000018464patl29640.530ENSLACG00000005291-9940.079Latimeria_chalumnae
ENSXMAG00000018464patl26032.181ENSLACG00000004640PATL16332.251Latimeria_chalumnae
ENSXMAG00000018464patl27332.937ENSLOCG00000000717patl19830.497Lepisosteus_oculatus
ENSXMAG00000018464patl25037.398ENSLAFG00000015161PATL19730.000Loxodonta_africana
ENSXMAG00000018464patl25845.080ENSLAFG00000031124PATL27744.651Loxodonta_africana
ENSXMAG00000018464patl25146.594ENSMFAG00000003565PATL27744.828Macaca_fascicularis
ENSXMAG00000018464patl25045.706ENSMMUG00000014294PATL29946.175Macaca_mulatta
ENSXMAG00000018464patl25146.594ENSMNEG00000034510PATL27744.828Macaca_nemestrina
ENSXMAG00000018464patl25843.953ENSMLEG00000042248PATL27744.828Mandrillus_leucophaeus
ENSXMAG00000018464patl25436.181ENSMAMG00000003950patl15236.203Mastacembelus_armatus
ENSXMAG00000018464patl29667.486ENSMAMG00000013327patl29969.469Mastacembelus_armatus
ENSXMAG00000018464patl25436.548ENSMZEG00005013404patl15235.747Maylandia_zebra
ENSXMAG00000018464patl210072.665ENSMZEG00005014292patl29873.380Maylandia_zebra
ENSXMAG00000018464patl28143.874ENSMGAG00000001309PATL29744.279Meleagris_gallopavo
ENSXMAG00000018464patl26243.290ENSMAUG00000001008Patl28444.396Mesocricetus_auratus
ENSXMAG00000018464patl25044.875ENSMICG00000005037PATL29945.082Microcebus_murinus
ENSXMAG00000018464patl25744.706ENSMOCG00000015367Patl27844.681Microtus_ochrogaster
ENSXMAG00000018464patl25437.410ENSMOCG00000010087Patl19730.241Microtus_ochrogaster
ENSXMAG00000018464patl25435.623ENSMMOG00000013711patl16234.459Mola_mola
ENSXMAG00000018464patl28472.829ENSMMOG00000001299patl29672.829Mola_mola
ENSXMAG00000018464patl25436.364ENSMODG00000020201PATL15735.622Monodelphis_domestica
ENSXMAG00000018464patl25844.700ENSMODG00000017690PATL28442.474Monodelphis_domestica
ENSXMAG00000018464patl210072.791ENSMALG00000008131patl29473.143Monopterus_albus
ENSXMAG00000018464patl25037.845ENSMALG00000018706patl15237.845Monopterus_albus
ENSXMAG00000018464patl25537.381MGP_CAROLIEiJ_G0022739Patl16435.897Mus_caroli
ENSXMAG00000018464patl25644.084MGP_CAROLIEiJ_G0024205Patl27844.316Mus_caroli
ENSXMAG00000018464patl25544.153ENSMUSG00000027233Patl27544.282Mus_musculus
ENSXMAG00000018464patl25537.381ENSMUSG00000046139Patl19730.165Mus_musculus
ENSXMAG00000018464patl25537.619MGP_PahariEiJ_G0014233Patl19730.203Mus_pahari
ENSXMAG00000018464patl25642.958MGP_PahariEiJ_G0025648Patl27843.897Mus_pahari
ENSXMAG00000018464patl25643.953MGP_SPRETEiJ_G0025122Patl27843.953Mus_spretus
ENSXMAG00000018464patl25537.381MGP_SPRETEiJ_G0023652Patl19730.165Mus_spretus
ENSXMAG00000018464patl25436.867ENSMPUG00000014607PATL19730.295Mustela_putorius_furo
ENSXMAG00000018464patl25536.277ENSMLUG00000011169PATL19730.848Myotis_lucifugus
ENSXMAG00000018464patl25540.097ENSNGAG00000020368Patl27740.648Nannospalax_galili
ENSXMAG00000018464patl25436.145ENSNGAG00000003682Patl19730.191Nannospalax_galili
ENSXMAG00000018464patl29866.952ENSNBRG00000011745patl29966.904Neolamprologus_brichardi
ENSXMAG00000018464patl25436.386ENSNLEG00000013081PATL19830.508Nomascus_leucogenys
ENSXMAG00000018464patl25844.084ENSNLEG00000005673PATL27844.186Nomascus_leucogenys
ENSXMAG00000018464patl25337.626ENSOPRG00000007963PATL16037.783Ochotona_princeps
ENSXMAG00000018464patl210073.278ENSONIG00000011519patl29873.773Oreochromis_niloticus
ENSXMAG00000018464patl25436.802ENSONIG00000004170patl15934.389Oreochromis_niloticus
ENSXMAG00000018464patl25038.108ENSOANG00000011117-9136.870Ornithorhynchus_anatinus
ENSXMAG00000018464patl25543.405ENSOANG00000001538-8943.137Ornithorhynchus_anatinus
ENSXMAG00000018464patl25436.779ENSOCUG00000002156PATL19730.446Oryctolagus_cuniculus
ENSXMAG00000018464patl25444.089ENSOCUG00000006339PATL27543.609Oryctolagus_cuniculus
ENSXMAG00000018464patl210073.538ENSORLG00000005780patl29874.929Oryzias_latipes
ENSXMAG00000018464patl210073.501ENSORLG00020016506patl29574.893Oryzias_latipes_hni
ENSXMAG00000018464patl25437.468ENSORLG00015022240patl15037.722Oryzias_latipes_hsok
ENSXMAG00000018464patl210073.538ENSORLG00015014500patl29874.929Oryzias_latipes_hsok
ENSXMAG00000018464patl210074.409ENSOMEG00000021628patl29875.107Oryzias_melastigma
ENSXMAG00000018464patl26043.736ENSOGAG00000004709PATL27943.736Otolemur_garnettii
ENSXMAG00000018464patl25544.903ENSOARG00000003762PATL27444.444Ovis_aries
ENSXMAG00000018464patl25844.419ENSPPAG00000007221PATL27644.419Pan_paniscus
ENSXMAG00000018464patl25436.145ENSPPAG00000034275PATL19730.378Pan_paniscus
ENSXMAG00000018464patl25745.647ENSPPRG00000004279PATL27646.047Panthera_pardus
ENSXMAG00000018464patl25436.386ENSPPRG00000020639PATL19830.435Panthera_pardus
ENSXMAG00000018464patl25436.386ENSPTIG00000019298PATL19730.435Panthera_tigris_altaica
ENSXMAG00000018464patl25745.882ENSPTIG00000018964PATL27746.279Panthera_tigris_altaica
ENSXMAG00000018464patl25844.419ENSPTRG00000041536PATL27644.419Pan_troglodytes
ENSXMAG00000018464patl25146.594ENSPANG00000018026PATL27744.419Papio_anubis
ENSXMAG00000018464patl210054.369ENSPKIG00000016887patl29754.558Paramormyrops_kingsleyae
ENSXMAG00000018464patl25735.817ENSPKIG00000016224patl15635.867Paramormyrops_kingsleyae
ENSXMAG00000018464patl25846.744ENSPSIG00000017690PATL29545.758Pelodiscus_sinensis
ENSXMAG00000018464patl29330.165ENSPSIG00000016206PATL19330.418Pelodiscus_sinensis
ENSXMAG00000018464patl29665.588ENSPMGG00000014550patl210065.492Periophthalmus_magnuspinnatus
ENSXMAG00000018464patl25943.880ENSPEMG00000016509Patl27844.000Peromyscus_maniculatus_bairdii
ENSXMAG00000018464patl25437.108ENSPEMG00000014215Patl19830.102Peromyscus_maniculatus_bairdii
ENSXMAG00000018464patl25436.842ENSPCIG00000010852PATL19830.569Phascolarctos_cinereus
ENSXMAG00000018464patl25646.324ENSPCIG00000018256PATL28146.324Phascolarctos_cinereus
ENSXMAG00000018464patl25536.000ENSPFOG00000007768patl15136.000Poecilia_formosa
ENSXMAG00000018464patl210093.211ENSPFOG00000007305patl29892.075Poecilia_formosa
ENSXMAG00000018464patl210093.069ENSPLAG00000020713patl29892.075Poecilia_latipinna
ENSXMAG00000018464patl210092.928ENSPMEG00000018942patl29891.787Poecilia_mexicana
ENSXMAG00000018464patl28582.372ENSPREG00000023066patl29981.384Poecilia_reticulata
ENSXMAG00000018464patl25436.627ENSPCOG00000020770PATL19730.830Propithecus_coquereli
ENSXMAG00000018464patl25744.366ENSPCOG00000000295PATL210045.946Propithecus_coquereli
ENSXMAG00000018464patl25434.080ENSPVAG00000015239PATL17133.261Pteropus_vampyrus
ENSXMAG00000018464patl29673.396ENSPNYG00000017381patl29873.396Pundamilia_nyererei
ENSXMAG00000018464patl210052.538ENSPNAG00000002315patl29853.693Pygocentrus_nattereri
ENSXMAG00000018464patl25436.020ENSPNAG00000017907patl15335.529Pygocentrus_nattereri
ENSXMAG00000018464patl25543.689ENSRNOG00000017061Patl27544.444Rattus_norvegicus
ENSXMAG00000018464patl25146.049ENSRBIG00000040369PATL27245.250Rhinopithecus_bieti
ENSXMAG00000018464patl25146.322ENSRROG00000028786PATL27245.500Rhinopithecus_roxellana
ENSXMAG00000018464patl25436.627ENSRROG00000032861PATL19730.353Rhinopithecus_roxellana
ENSXMAG00000018464patl25436.386ENSSBOG00000025195PATL19730.378Saimiri_boliviensis_boliviensis
ENSXMAG00000018464patl25146.883ENSSBOG00000034766PATL27645.199Saimiri_boliviensis_boliviensis
ENSXMAG00000018464patl25436.779ENSSHAG00000004309PATL19830.051Sarcophilus_harrisii
ENSXMAG00000018464patl210053.047ENSSFOG00015000720patl29753.968Scleropages_formosus
ENSXMAG00000018464patl25438.131ENSSFOG00015009614patl15437.116Scleropages_formosus
ENSXMAG00000018464patl25435.949ENSSMAG00000009482patl15934.455Scophthalmus_maximus
ENSXMAG00000018464patl28583.105ENSSMAG00000017262patl210063.006Scophthalmus_maximus
ENSXMAG00000018464patl210077.994ENSSDUG00000022927patl29878.298Seriola_dumerili
ENSXMAG00000018464patl25435.949ENSSDUG00000005362patl15135.828Seriola_dumerili
ENSXMAG00000018464patl25435.949ENSSLDG00000019146patl15335.828Seriola_lalandi_dorsalis
ENSXMAG00000018464patl29674.780ENSSLDG00000017922patl210073.913Seriola_lalandi_dorsalis
ENSXMAG00000018464patl25244.987ENSSARG00000009047PATL27444.892Sorex_araneus
ENSXMAG00000018464patl25436.298ENSSARG00000009600PATL16135.729Sorex_araneus
ENSXMAG00000018464patl25437.215ENSSPAG00000003187patl15137.975Stegastes_partitus
ENSXMAG00000018464patl29672.794ENSSPAG00000004784patl210073.824Stegastes_partitus
ENSXMAG00000018464patl25436.386ENSSSCG00000013124PATL19632.282Sus_scrofa
ENSXMAG00000018464patl25538.663ENSTGUG00000006222PATL15438.663Taeniopygia_guttata
ENSXMAG00000018464patl25247.462ENSTGUG00000004619-9647.273Taeniopygia_guttata
ENSXMAG00000018464patl210069.693ENSTRUG00000005647patl29870.588Takifugu_rubripes
ENSXMAG00000018464patl25436.683ENSTRUG00000000709patl15136.709Takifugu_rubripes
ENSXMAG00000018464patl25336.294ENSTTRG00000009389PATL16036.294Tursiops_truncatus
ENSXMAG00000018464patl25845.349ENSUAMG00000018533PATL27645.747Ursus_americanus
ENSXMAG00000018464patl25845.244ENSUMAG00000007738PATL27645.642Ursus_maritimus
ENSXMAG00000018464patl25435.266ENSUMAG00000018634PATL19630.725Ursus_maritimus
ENSXMAG00000018464patl29630.573ENSVVUG00000016668PATL19730.740Vulpes_vulpes
ENSXMAG00000018464patl25845.863ENSVVUG00000011576PATL27645.863Vulpes_vulpes
ENSXMAG00000018464patl27943.586ENSXETG00000014167patl29844.000Xenopus_tropicalis
ENSXMAG00000018464patl25537.594ENSXCOG00000010808patl17037.594Xiphophorus_couchianus

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