EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018468 (Gene tree)
Gene ID: 102220924
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4506 bases
Position: chr20:20560617-20565122
Accession: 102220924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018512	EF_TS	PF00889.19	1.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018540	-	1356	XM_005816817	ENSXMAP00000018512	307 (aa)	XP_005816874	M4AVL7

Gene Model

Click here to download ENSXMAG00000018468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018468	tsfm	91	51.049	ENSG00000123297	TSFM	100	56.213	Homo_sapiens
ENSXMAG00000018468	tsfm	100	82.736	ENSAPOG00000014844	tsfm	99	82.736	Acanthochromis_polyacanthus
ENSXMAG00000018468	tsfm	91	52.797	ENSAMEG00000005452	TSFM	84	54.545	Ailuropoda_melanoleuca
ENSXMAG00000018468	tsfm	99	82.508	ENSACIG00000001066	tsfm	98	82.508	Amphilophus_citrinellus
ENSXMAG00000018468	tsfm	100	82.085	ENSAOCG00000007132	tsfm	99	82.085	Amphiprion_ocellaris
ENSXMAG00000018468	tsfm	100	82.410	ENSAPEG00000015755	tsfm	99	82.410	Amphiprion_percula
ENSXMAG00000018468	tsfm	100	78.176	ENSATEG00000001497	tsfm	99	78.176	Anabas_testudineus
ENSXMAG00000018468	tsfm	90	53.333	ENSACAG00000013044	TSFM	87	53.333	Anolis_carolinensis
ENSXMAG00000018468	tsfm	91	53.147	ENSANAG00000038019	TSFM	89	53.448	Aotus_nancymaae
ENSXMAG00000018468	tsfm	99	81.518	ENSACLG00000000139	tsfm	98	81.518	Astatotilapia_calliptera
ENSXMAG00000018468	tsfm	99	66.997	ENSAMXG00000001713	tsfm	98	66.997	Astyanax_mexicanus
ENSXMAG00000018468	tsfm	87	55.147	ENSBTAG00000016912	TSFM	74	54.577	Bos_taurus
ENSXMAG00000018468	tsfm	86	34.021	WBGene00010094	tsfm-1	91	34.021	Caenorhabditis_elegans
ENSXMAG00000018468	tsfm	91	52.797	ENSCJAG00000006600	TSFM	89	53.103	Callithrix_jacchus
ENSXMAG00000018468	tsfm	89	53.381	ENSCAFG00000000293	-	88	53.684	Canis_familiaris
ENSXMAG00000018468	tsfm	50	46.584	ENSCAFG00000007218	-	95	47.273	Canis_familiaris
ENSXMAG00000018468	tsfm	89	53.381	ENSCAFG00020022844	TSFM	69	53.684	Canis_lupus_dingo
ENSXMAG00000018468	tsfm	87	54.412	ENSCHIG00000013850	TSFM	92	52.365	Capra_hircus
ENSXMAG00000018468	tsfm	75	53.191	ENSTSYG00000028892	TSFM	90	53.586	Carlito_syrichta
ENSXMAG00000018468	tsfm	61	43.455	ENSCAPG00000007733	-	95	44.103	Cavia_aperea
ENSXMAG00000018468	tsfm	86	53.333	ENSCPOG00000037732	TSFM	84	53.650	Cavia_porcellus
ENSXMAG00000018468	tsfm	91	53.846	ENSCCAG00000033254	TSFM	89	54.138	Cebus_capucinus
ENSXMAG00000018468	tsfm	91	51.930	ENSCATG00000016867	TSFM	89	52.249	Cercocebus_atys
ENSXMAG00000018468	tsfm	86	51.481	ENSCLAG00000009226	TSFM	84	51.825	Chinchilla_lanigera
ENSXMAG00000018468	tsfm	91	52.797	ENSCSAG00000004601	TSFM	89	53.103	Chlorocebus_sabaeus
ENSXMAG00000018468	tsfm	61	57.143	ENSCHOG00000002360	TSFM	74	57.143	Choloepus_hoffmanni
ENSXMAG00000018468	tsfm	93	55.631	ENSCPBG00000018147	TSFM	88	55.631	Chrysemys_picta_bellii
ENSXMAG00000018468	tsfm	90	33.651	ENSCING00000001275	-	94	33.651	Ciona_intestinalis
ENSXMAG00000018468	tsfm	67	33.645	ENSCSAVG00000007722	-	99	33.645	Ciona_savignyi
ENSXMAG00000018468	tsfm	75	53.586	ENSCANG00000030298	TSFM	89	53.942	Colobus_angolensis_palliatus
ENSXMAG00000018468	tsfm	92	53.633	ENSCGRG00001023000	TSFM	89	53.793	Cricetulus_griseus_chok1gshd
ENSXMAG00000018468	tsfm	92	53.633	ENSCGRG00000006566	TSFM	89	53.793	Cricetulus_griseus_crigri
ENSXMAG00000018468	tsfm	100	69.381	ENSCSEG00000003376	tsfm	99	69.381	Cynoglossus_semilaevis
ENSXMAG00000018468	tsfm	100	84.365	ENSCVAG00000001340	tsfm	100	84.365	Cyprinodon_variegatus
ENSXMAG00000018468	tsfm	97	65.772	ENSDARG00000060748	tsfm	98	65.772	Danio_rerio
ENSXMAG00000018468	tsfm	97	49.837	ENSDNOG00000049415	TSFM	96	50.641	Dasypus_novemcinctus
ENSXMAG00000018468	tsfm	77	54.357	ENSDORG00000007272	Tsfm	91	54.357	Dipodomys_ordii
ENSXMAG00000018468	tsfm	91	38.176	FBgn0032646	mEFTs	92	38.176	Drosophila_melanogaster
ENSXMAG00000018468	tsfm	90	52.482	ENSETEG00000002686	-	87	52.817	Echinops_telfairi
ENSXMAG00000018468	tsfm	91	52.431	ENSEASG00005007292	TSFM	70	52.921	Equus_asinus_asinus
ENSXMAG00000018468	tsfm	91	52.098	ENSECAG00000010520	TSFM	79	52.414	Equus_caballus
ENSXMAG00000018468	tsfm	99	72.039	ENSELUG00000015481	tsfm	99	72.039	Esox_lucius
ENSXMAG00000018468	tsfm	93	51.890	ENSFCAG00000023794	TSFM	96	51.125	Felis_catus
ENSXMAG00000018468	tsfm	93	51.203	ENSFDAG00000016548	TSFM	90	51.203	Fukomys_damarensis
ENSXMAG00000018468	tsfm	99	87.829	ENSFHEG00000013458	tsfm	99	87.829	Fundulus_heteroclitus
ENSXMAG00000018468	tsfm	90	73.285	ENSGMOG00000000868	tsfm	96	73.285	Gadus_morhua
ENSXMAG00000018468	tsfm	100	96.743	ENSGAFG00000021764	tsfm	100	96.743	Gambusia_affinis
ENSXMAG00000018468	tsfm	97	77.852	ENSGACG00000000697	tsfm	96	77.852	Gasterosteus_aculeatus
ENSXMAG00000018468	tsfm	92	56.207	ENSGAGG00000020897	TSFM	86	56.207	Gopherus_agassizii
ENSXMAG00000018468	tsfm	91	51.399	ENSGGOG00000001415	TSFM	89	51.724	Gorilla_gorilla
ENSXMAG00000018468	tsfm	99	81.848	ENSHBUG00000021738	tsfm	98	81.848	Haplochromis_burtoni
ENSXMAG00000018468	tsfm	92	51.027	ENSHGLG00000008559	TSFM	89	51.027	Heterocephalus_glaber_female
ENSXMAG00000018468	tsfm	92	51.027	ENSHGLG00100005643	TSFM	89	51.027	Heterocephalus_glaber_male
ENSXMAG00000018468	tsfm	100	76.299	ENSHCOG00000021049	tsfm	99	76.299	Hippocampus_comes
ENSXMAG00000018468	tsfm	98	50.327	ENSIPUG00000019836	tsfm	91	50.327	Ictalurus_punctatus
ENSXMAG00000018468	tsfm	87	52.768	ENSSTOG00000001159	TSFM	91	50.000	Ictidomys_tridecemlineatus
ENSXMAG00000018468	tsfm	98	49.677	ENSJJAG00000012907	Tsfm	96	49.677	Jaculus_jaculus
ENSXMAG00000018468	tsfm	99	81.518	ENSKMAG00000018906	tsfm	98	81.518	Kryptolebias_marmoratus
ENSXMAG00000018468	tsfm	100	77.199	ENSLBEG00000019779	tsfm	99	77.199	Labrus_bergylta
ENSXMAG00000018468	tsfm	98	53.896	ENSLACG00000018125	TSFM	94	53.896	Latimeria_chalumnae
ENSXMAG00000018468	tsfm	98	47.231	ENSLOCG00000006608	tsfm	97	47.249	Lepisosteus_oculatus
ENSXMAG00000018468	tsfm	92	52.414	ENSLAFG00000015177	TSFM	89	52.414	Loxodonta_africana
ENSXMAG00000018468	tsfm	91	51.930	ENSMFAG00000036132	TSFM	89	52.249	Macaca_fascicularis
ENSXMAG00000018468	tsfm	91	51.930	ENSMMUG00000005893	TSFM	89	52.249	Macaca_mulatta
ENSXMAG00000018468	tsfm	91	51.930	ENSMNEG00000026351	TSFM	89	52.249	Macaca_nemestrina
ENSXMAG00000018468	tsfm	91	51.930	ENSMLEG00000029811	TSFM	89	52.249	Mandrillus_leucophaeus
ENSXMAG00000018468	tsfm	100	81.107	ENSMAMG00000002230	tsfm	99	81.107	Mastacembelus_armatus
ENSXMAG00000018468	tsfm	99	81.848	ENSMZEG00005008170	tsfm	98	81.848	Maylandia_zebra
ENSXMAG00000018468	tsfm	93	53.608	ENSMAUG00000011705	Tsfm	90	53.952	Mesocricetus_auratus
ENSXMAG00000018468	tsfm	97	48.701	ENSMICG00000003812	TSFM	96	49.359	Microcebus_murinus
ENSXMAG00000018468	tsfm	98	52.427	ENSMOCG00000006104	Tsfm	96	52.581	Microtus_ochrogaster
ENSXMAG00000018468	tsfm	100	80.782	ENSMMOG00000021854	tsfm	99	80.782	Mola_mola
ENSXMAG00000018468	tsfm	89	53.430	ENSMODG00000021351	TSFM	84	53.430	Monodelphis_domestica
ENSXMAG00000018468	tsfm	100	80.782	ENSMALG00000015046	tsfm	99	80.782	Monopterus_albus
ENSXMAG00000018468	tsfm	98	53.526	MGP_CAROLIEiJ_G0015873	Tsfm	96	54.301	Mus_caroli
ENSXMAG00000018468	tsfm	98	52.885	ENSMUSG00000040521	Tsfm	96	53.763	Mus_musculus
ENSXMAG00000018468	tsfm	98	52.885	MGP_PahariEiJ_G0031212	Tsfm	96	53.763	Mus_pahari
ENSXMAG00000018468	tsfm	98	52.885	MGP_SPRETEiJ_G0016699	Tsfm	96	53.763	Mus_spretus
ENSXMAG00000018468	tsfm	97	51.613	ENSMPUG00000002051	TSFM	96	51.911	Mustela_putorius_furo
ENSXMAG00000018468	tsfm	86	54.074	ENSMLUG00000005940	TSFM	96	50.649	Myotis_lucifugus
ENSXMAG00000018468	tsfm	87	54.412	ENSNGAG00000014356	Tsfm	84	54.015	Nannospalax_galili
ENSXMAG00000018468	tsfm	99	81.518	ENSNBRG00000016413	tsfm	98	81.518	Neolamprologus_brichardi
ENSXMAG00000018468	tsfm	91	52.098	ENSNLEG00000017178	TSFM	89	52.414	Nomascus_leucogenys
ENSXMAG00000018468	tsfm	71	57.143	ENSMEUG00000004047	TSFM	65	57.143	Notamacropus_eugenii
ENSXMAG00000018468	tsfm	91	47.727	ENSOPRG00000006670	TSFM	90	48.065	Ochotona_princeps
ENSXMAG00000018468	tsfm	98	51.923	ENSODEG00000001882	TSFM	96	51.911	Octodon_degus
ENSXMAG00000018468	tsfm	99	74.342	ENSONIG00000019100	tsfm	97	74.342	Oreochromis_niloticus
ENSXMAG00000018468	tsfm	90	47.697	ENSOCUG00000012512	TSFM	76	45.846	Oryctolagus_cuniculus
ENSXMAG00000018468	tsfm	98	77.409	ENSORLG00000030201	tsfm	97	77.409	Oryzias_latipes
ENSXMAG00000018468	tsfm	95	78.425	ENSORLG00020004740	tsfm	97	77.409	Oryzias_latipes_hni
ENSXMAG00000018468	tsfm	95	78.082	ENSORLG00015022703	tsfm	97	77.076	Oryzias_latipes_hsok
ENSXMAG00000018468	tsfm	99	78.641	ENSOMEG00000008934	tsfm	98	78.641	Oryzias_melastigma
ENSXMAG00000018468	tsfm	96	50.165	ENSOGAG00000012235	TSFM	93	50.165	Otolemur_garnettii
ENSXMAG00000018468	tsfm	87	54.779	ENSOARG00000005095	TSFM	84	54.225	Ovis_aries
ENSXMAG00000018468	tsfm	91	51.049	ENSPPAG00000043428	TSFM	89	51.379	Pan_paniscus
ENSXMAG00000018468	tsfm	93	51.890	ENSPPRG00000009667	TSFM	96	51.125	Panthera_pardus
ENSXMAG00000018468	tsfm	95	51.987	ENSPTIG00000015290	TSFM	96	51.438	Panthera_tigris_altaica
ENSXMAG00000018468	tsfm	91	51.049	ENSPTRG00000005152	TSFM	89	51.379	Pan_troglodytes
ENSXMAG00000018468	tsfm	91	51.930	ENSPANG00000007866	TSFM	89	52.249	Papio_anubis
ENSXMAG00000018468	tsfm	94	63.322	ENSPKIG00000008495	tsfm	91	63.322	Paramormyrops_kingsleyae
ENSXMAG00000018468	tsfm	64	53.202	ENSPSIG00000015776	TSFM	93	53.202	Pelodiscus_sinensis
ENSXMAG00000018468	tsfm	100	73.290	ENSPMGG00000007022	tsfm	99	73.290	Periophthalmus_magnuspinnatus
ENSXMAG00000018468	tsfm	92	53.287	ENSPEMG00000000414	Tsfm	90	53.793	Peromyscus_maniculatus_bairdii
ENSXMAG00000018468	tsfm	89	53.430	ENSPCIG00000023619	TSFM	87	53.430	Phascolarctos_cinereus
ENSXMAG00000018468	tsfm	100	94.788	ENSPFOG00000010782	tsfm	100	94.788	Poecilia_formosa
ENSXMAG00000018468	tsfm	100	93.485	ENSPLAG00000008105	tsfm	100	93.485	Poecilia_latipinna
ENSXMAG00000018468	tsfm	100	94.788	ENSPMEG00000002567	tsfm	100	94.788	Poecilia_mexicana
ENSXMAG00000018468	tsfm	100	94.463	ENSPREG00000016696	tsfm	100	94.463	Poecilia_reticulata
ENSXMAG00000018468	tsfm	91	51.748	ENSPPYG00000004708	TSFM	76	52.069	Pongo_abelii
ENSXMAG00000018468	tsfm	92	51.000	ENSPCAG00000003789	TSFM	90	50.993	Procavia_capensis
ENSXMAG00000018468	tsfm	89	52.313	ENSPCOG00000021606	TSFM	96	49.679	Propithecus_coquereli
ENSXMAG00000018468	tsfm	91	53.147	ENSPVAG00000012141	TSFM	89	53.448	Pteropus_vampyrus
ENSXMAG00000018468	tsfm	99	81.848	ENSPNYG00000001230	tsfm	98	81.848	Pundamilia_nyererei
ENSXMAG00000018468	tsfm	100	65.260	ENSPNAG00000003241	tsfm	99	65.260	Pygocentrus_nattereri
ENSXMAG00000018468	tsfm	96	48.675	ENSRNOG00000048843	Tsfm	94	49.505	Rattus_norvegicus
ENSXMAG00000018468	tsfm	91	52.448	ENSRBIG00000037278	TSFM	89	52.759	Rhinopithecus_bieti
ENSXMAG00000018468	tsfm	91	52.448	ENSRROG00000031769	TSFM	89	52.759	Rhinopithecus_roxellana
ENSXMAG00000018468	tsfm	91	46.154	ENSSBOG00000021465	TSFM	88	46.552	Saimiri_boliviensis_boliviensis
ENSXMAG00000018468	tsfm	88	54.710	ENSSHAG00000009664	TSFM	81	54.710	Sarcophilus_harrisii
ENSXMAG00000018468	tsfm	88	68.519	ENSSFOG00015014457	tsfm	88	68.519	Scleropages_formosus
ENSXMAG00000018468	tsfm	100	79.153	ENSSMAG00000002467	tsfm	99	79.153	Scophthalmus_maximus
ENSXMAG00000018468	tsfm	100	82.085	ENSSDUG00000006833	tsfm	99	82.085	Seriola_dumerili
ENSXMAG00000018468	tsfm	100	82.736	ENSSLDG00000000715	tsfm	99	82.736	Seriola_lalandi_dorsalis
ENSXMAG00000018468	tsfm	72	42.640	ENSSARG00000000785	-	79	43.216	Sorex_araneus
ENSXMAG00000018468	tsfm	85	51.852	ENSSPUG00000006435	TSFM	97	51.852	Sphenodon_punctatus
ENSXMAG00000018468	tsfm	100	80.456	ENSSPAG00000002548	tsfm	99	80.456	Stegastes_partitus
ENSXMAG00000018468	tsfm	91	54.007	ENSSSCG00000037767	TSFM	75	54.325	Sus_scrofa
ENSXMAG00000018468	tsfm	100	73.941	ENSTRUG00000003081	tsfm	99	73.941	Takifugu_rubripes
ENSXMAG00000018468	tsfm	100	75.244	ENSTNIG00000014578	tsfm	99	75.244	Tetraodon_nigroviridis
ENSXMAG00000018468	tsfm	98	42.683	ENSTBEG00000011603	TSFM	96	43.030	Tupaia_belangeri
ENSXMAG00000018468	tsfm	92	53.448	ENSTTRG00000008351	TSFM	88	53.448	Tursiops_truncatus
ENSXMAG00000018468	tsfm	91	52.797	ENSUAMG00000013142	TSFM	89	53.103	Ursus_americanus
ENSXMAG00000018468	tsfm	91	52.797	ENSUMAG00000020123	TSFM	89	53.103	Ursus_maritimus
ENSXMAG00000018468	tsfm	69	57.609	ENSVPAG00000000209	TSFM	67	57.609	Vicugna_pacos
ENSXMAG00000018468	tsfm	85	53.160	ENSVVUG00000016735	TSFM	87	53.480	Vulpes_vulpes
ENSXMAG00000018468	tsfm	92	54.325	ENSXETG00000009653	tsfm	98	54.325	Xenopus_tropicalis