EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018535 (Gene tree)
Gene ID: 102238144
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: uncharacterized LOC102238144
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 16064 bases
Position: chr19:20924215-20940278
Accession: 102238144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018570	RRM_1	PF00076.22	5.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018598	-	2784	XM_023352329	ENSXMAP00000018570	648 (aa)	XP_023208097	M4AVS5

Gene Model

Click here to download ENSXMAG00000018535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018535	si:dkey-33c12.4	100	61.550	ENSAPOG00000005058	si:dkey-33c12.4	99	60.805	Acanthochromis_polyacanthus
ENSXMAG00000018535	si:dkey-33c12.4	98	62.117	ENSAOCG00000020066	si:dkey-33c12.4	97	62.117	Amphiprion_ocellaris
ENSXMAG00000018535	si:dkey-33c12.4	99	60.276	ENSATEG00000018885	si:dkey-33c12.4	99	60.123	Anabas_testudineus
ENSXMAG00000018535	si:dkey-33c12.4	99	61.562	ENSACLG00000014192	si:dkey-33c12.4	99	60.559	Astatotilapia_calliptera
ENSXMAG00000018535	si:dkey-33c12.4	96	35.616	ENSAMXG00000010871	si:dkey-33c12.4	55	44.415	Astyanax_mexicanus
ENSXMAG00000018535	si:dkey-33c12.4	53	34.540	ENSAMXG00000041967	zgc:123010	56	34.262	Astyanax_mexicanus
ENSXMAG00000018535	si:dkey-33c12.4	84	30.035	ENSCPBG00000024454	-	50	35.165	Chrysemys_picta_bellii
ENSXMAG00000018535	si:dkey-33c12.4	72	34.122	ENSCSEG00000002755	-	59	40.058	Cynoglossus_semilaevis
ENSXMAG00000018535	si:dkey-33c12.4	100	66.820	ENSCVAG00000006564	-	99	67.890	Cyprinodon_variegatus
ENSXMAG00000018535	si:dkey-33c12.4	96	35.375	ENSDARG00000057890	si:dkey-33c12.4	98	35.455	Danio_rerio
ENSXMAG00000018535	si:dkey-33c12.4	81	36.447	ENSELUG00000001633	-	57	41.053	Esox_lucius
ENSXMAG00000018535	si:dkey-33c12.4	95	36.501	ENSELUG00000002009	si:dkey-33c12.4	76	61.940	Esox_lucius
ENSXMAG00000018535	si:dkey-33c12.4	100	74.810	ENSFHEG00000005521	si:dkey-33c12.4	99	75.721	Fundulus_heteroclitus
ENSXMAG00000018535	si:dkey-33c12.4	52	35.345	ENSFHEG00000002306	zgc:123010	58	42.138	Fundulus_heteroclitus
ENSXMAG00000018535	si:dkey-33c12.4	50	40.909	ENSGMOG00000018473	zgc:123010	85	39.412	Gadus_morhua
ENSXMAG00000018535	si:dkey-33c12.4	100	91.538	ENSGAFG00000017596	si:dkey-33c12.4	100	92.615	Gambusia_affinis
ENSXMAG00000018535	si:dkey-33c12.4	99	62.406	ENSHBUG00000010735	si:dkey-33c12.4	99	61.955	Haplochromis_burtoni
ENSXMAG00000018535	si:dkey-33c12.4	96	39.486	ENSIPUG00000005998	si:dkey-33c12.4	99	38.427	Ictalurus_punctatus
ENSXMAG00000018535	si:dkey-33c12.4	51	40.708	ENSKMAG00000006468	-	54	40.580	Kryptolebias_marmoratus
ENSXMAG00000018535	si:dkey-33c12.4	100	62.935	ENSKMAG00000016610	si:dkey-33c12.4	99	61.689	Kryptolebias_marmoratus
ENSXMAG00000018535	si:dkey-33c12.4	62	34.510	ENSKMAG00000021350	zgc:123010	60	43.210	Kryptolebias_marmoratus
ENSXMAG00000018535	si:dkey-33c12.4	91	55.099	ENSLBEG00000017203	-	99	55.757	Labrus_bergylta
ENSXMAG00000018535	si:dkey-33c12.4	76	30.171	ENSLBEG00000023984	zgc:123010	58	45.000	Labrus_bergylta
ENSXMAG00000018535	si:dkey-33c12.4	99	55.793	ENSLBEG00000021088	-	99	56.098	Labrus_bergylta
ENSXMAG00000018535	si:dkey-33c12.4	54	37.867	ENSLBEG00000028046	-	56	38.587	Labrus_bergylta
ENSXMAG00000018535	si:dkey-33c12.4	52	35.775	ENSLACG00000004602	-	67	33.744	Latimeria_chalumnae
ENSXMAG00000018535	si:dkey-33c12.4	84	36.833	ENSLOCG00000001861	-	81	34.821	Lepisosteus_oculatus
ENSXMAG00000018535	si:dkey-33c12.4	99	61.315	ENSMAMG00000000111	si:dkey-33c12.4	99	61.162	Mastacembelus_armatus
ENSXMAG00000018535	si:dkey-33c12.4	99	61.712	ENSMZEG00005014276	si:dkey-33c12.4	99	61.411	Maylandia_zebra
ENSXMAG00000018535	si:dkey-33c12.4	99	58.689	ENSMALG00000002265	si:dkey-33c12.4	99	58.447	Monopterus_albus
ENSXMAG00000018535	si:dkey-33c12.4	50	72.308	ENSONIG00000012263	-	63	72.308	Oreochromis_niloticus
ENSXMAG00000018535	si:dkey-33c12.4	50	38.199	ENSONIG00000007538	-	91	53.293	Oreochromis_niloticus
ENSXMAG00000018535	si:dkey-33c12.4	99	52.722	ENSORLG00000029651	si:dkey-33c12.4	99	51.459	Oryzias_latipes
ENSXMAG00000018535	si:dkey-33c12.4	78	33.837	ENSORLG00000030385	-	54	39.306	Oryzias_latipes
ENSXMAG00000018535	si:dkey-33c12.4	99	51.802	ENSORLG00020008750	si:dkey-33c12.4	89	52.031	Oryzias_latipes_hni
ENSXMAG00000018535	si:dkey-33c12.4	98	51.719	ENSOMEG00000008913	-	99	50.746	Oryzias_melastigma
ENSXMAG00000018535	si:dkey-33c12.4	88	36.364	ENSPKIG00000011819	-	54	42.520	Paramormyrops_kingsleyae
ENSXMAG00000018535	si:dkey-33c12.4	100	91.311	ENSPFOG00000009143	si:dkey-33c12.4	100	91.006	Poecilia_formosa
ENSXMAG00000018535	si:dkey-33c12.4	96	91.627	ENSPLAG00000022537	si:dkey-33c12.4	100	91.153	Poecilia_latipinna
ENSXMAG00000018535	si:dkey-33c12.4	100	91.463	ENSPMEG00000015590	si:dkey-33c12.4	100	91.159	Poecilia_mexicana
ENSXMAG00000018535	si:dkey-33c12.4	51	40.625	ENSPREG00000019587	zgc:123010	67	30.726	Poecilia_reticulata
ENSXMAG00000018535	si:dkey-33c12.4	54	31.536	ENSPNYG00000007893	zgc:123010	55	44.828	Pundamilia_nyererei
ENSXMAG00000018535	si:dkey-33c12.4	99	61.862	ENSPNYG00000018262	si:dkey-33c12.4	99	61.562	Pundamilia_nyererei
ENSXMAG00000018535	si:dkey-33c12.4	97	35.843	ENSPNAG00000018386	si:dkey-33c12.4	98	35.338	Pygocentrus_nattereri
ENSXMAG00000018535	si:dkey-33c12.4	55	43.923	ENSSFOG00015005186	-	55	42.222	Scleropages_formosus
ENSXMAG00000018535	si:dkey-33c12.4	55	30.585	ENSSFOG00015021394	zgc:123010	64	31.117	Scleropages_formosus
ENSXMAG00000018535	si:dkey-33c12.4	79	34.774	ENSSFOG00015009199	-	56	40.642	Scleropages_formosus
ENSXMAG00000018535	si:dkey-33c12.4	63	31.787	ENSSMAG00000002904	zgc:123010	59	45.752	Scophthalmus_maximus
ENSXMAG00000018535	si:dkey-33c12.4	99	59.254	ENSSMAG00000008147	si:dkey-33c12.4	99	57.571	Scophthalmus_maximus
ENSXMAG00000018535	si:dkey-33c12.4	70	36.518	ENSSMAG00000010960	-	52	40.525	Scophthalmus_maximus
ENSXMAG00000018535	si:dkey-33c12.4	56	41.885	ENSSDUG00000010976	-	54	43.391	Seriola_dumerili
ENSXMAG00000018535	si:dkey-33c12.4	99	62.310	ENSSDUG00000003213	si:dkey-33c12.4	99	62.100	Seriola_dumerili
ENSXMAG00000018535	si:dkey-33c12.4	99	62.614	ENSSLDG00000009448	si:dkey-33c12.4	99	62.557	Seriola_lalandi_dorsalis
ENSXMAG00000018535	si:dkey-33c12.4	66	37.691	ENSSLDG00000012846	-	56	43.642	Seriola_lalandi_dorsalis
ENSXMAG00000018535	si:dkey-33c12.4	74	32.941	ENSSLDG00000019386	zgc:123010	62	43.210	Seriola_lalandi_dorsalis
ENSXMAG00000018535	si:dkey-33c12.4	100	62.908	ENSSPAG00000022577	-	99	62.166	Stegastes_partitus
ENSXMAG00000018535	si:dkey-33c12.4	54	32.708	ENSSPAG00000013621	zgc:123010	64	31.658	Stegastes_partitus
ENSXMAG00000018535	si:dkey-33c12.4	73	34.105	ENSTRUG00000000057	-	53	37.202	Takifugu_rubripes
ENSXMAG00000018535	si:dkey-33c12.4	99	44.817	ENSTRUG00000022374	si:dkey-33c12.4	90	45.666	Takifugu_rubripes
ENSXMAG00000018535	si:dkey-33c12.4	53	32.231	ENSXCOG00000012281	zgc:123010	72	33.058	Xiphophorus_couchianus