EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018590 (Gene tree)
Gene ID: 102230887
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 87825 bases
Position: chr6:10283409-10371233
Accession: 102230887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018674	ResIII	PF04851.15	1.1e-05	1	1
ENSXMAP00000018674	BRK	PF07533.16	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018702	-	12668	XM_023334830	ENSXMAP00000018674	3279 (aa)	XP_023190598	M4AW29

Gene Model

Click here to download ENSXMAG00000018590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018590	chd7	68	79.409	ENSG00000171316	CHD7	97	58.065	Homo_sapiens
ENSXMAG00000018590	chd7	82	85.311	ENSAPOG00000009351	chd7	98	83.110	Acanthochromis_polyacanthus
ENSXMAG00000018590	chd7	50	66.741	ENSAMEG00000006307	CHD8	54	69.121	Ailuropoda_melanoleuca
ENSXMAG00000018590	chd7	50	59.570	ENSACIG00000006440	chd8	60	64.403	Amphilophus_citrinellus
ENSXMAG00000018590	chd7	69	87.948	ENSACIG00000001590	chd7	98	94.180	Amphilophus_citrinellus
ENSXMAG00000018590	chd7	67	93.580	ENSAOCG00000002337	chd7	99	85.697	Amphiprion_ocellaris
ENSXMAG00000018590	chd7	99	84.932	ENSAPEG00000010332	chd7	99	84.077	Amphiprion_percula
ENSXMAG00000018590	chd7	68	94.915	ENSATEG00000002590	chd7	89	95.004	Anabas_testudineus
ENSXMAG00000018590	chd7	71	79.765	ENSAPLG00000005873	CHD7	71	79.670	Anas_platyrhynchos
ENSXMAG00000018590	chd7	64	79.088	ENSACAG00000005760	CHD7	71	78.807	Anolis_carolinensis
ENSXMAG00000018590	chd7	51	66.667	ENSACLG00000019692	chd8	71	64.463	Astatotilapia_calliptera
ENSXMAG00000018590	chd7	77	67.859	ENSAMXG00000006180	chd7	59	80.066	Astyanax_mexicanus
ENSXMAG00000018590	chd7	68	79.712	ENSBTAG00000021841	CHD7	76	79.154	Bos_taurus
ENSXMAG00000018590	chd7	50	66.816	ENSBTAG00000020422	CHD8	65	69.286	Bos_taurus
ENSXMAG00000018590	chd7	50	65.966	ENSCAFG00000007167	CHD7	68	79.199	Canis_familiaris
ENSXMAG00000018590	chd7	50	65.966	ENSCAFG00020015856	CHD7	68	78.145	Canis_lupus_dingo
ENSXMAG00000018590	chd7	68	79.712	ENSCHIG00000011729	CHD7	51	79.075	Capra_hircus
ENSXMAG00000018590	chd7	70	74.860	ENSCAPG00000007952	CHD7	70	74.804	Cavia_aperea
ENSXMAG00000018590	chd7	70	79.729	ENSCPOG00000013385	CHD7	71	79.592	Cavia_porcellus
ENSXMAG00000018590	chd7	69	79.409	ENSCATG00000020229	CHD7	71	79.042	Cercocebus_atys
ENSXMAG00000018590	chd7	69	79.330	ENSCSAG00000014349	CHD7	71	78.964	Chlorocebus_sabaeus
ENSXMAG00000018590	chd7	50	82.262	ENSCHOG00000008478	CHD7	76	79.023	Choloepus_hoffmanni
ENSXMAG00000018590	chd7	74	81.686	ENSCPBG00000021517	CHD7	90	80.018	Chrysemys_picta_bellii
ENSXMAG00000018590	chd7	68	79.250	ENSCANG00000041382	CHD7	71	78.885	Colobus_angolensis_palliatus
ENSXMAG00000018590	chd7	50	66.420	ENSCGRG00001014351	Chd8	60	69.444	Cricetulus_griseus_chok1gshd
ENSXMAG00000018590	chd7	69	79.825	ENSCGRG00001011949	Chd7	71	79.278	Cricetulus_griseus_chok1gshd
ENSXMAG00000018590	chd7	50	66.420	ENSCGRG00000009710	Chd8	63	69.444	Cricetulus_griseus_crigri
ENSXMAG00000018590	chd7	69	74.588	ENSCGRG00000000481	Chd7	64	74.411	Cricetulus_griseus_crigri
ENSXMAG00000018590	chd7	70	83.803	ENSCSEG00000017886	chd7	99	83.355	Cynoglossus_semilaevis
ENSXMAG00000018590	chd7	100	90.956	ENSCVAG00000017584	chd7	100	91.472	Cyprinodon_variegatus
ENSXMAG00000018590	chd7	76	69.000	ENSDARG00000075211	chd7	61	82.447	Danio_rerio
ENSXMAG00000018590	chd7	51	62.681	ENSDARG00000075543	chd8	70	64.303	Danio_rerio
ENSXMAG00000018590	chd7	68	80.128	ENSDNOG00000011674	CHD7	71	79.340	Dasypus_novemcinctus
ENSXMAG00000018590	chd7	68	79.426	ENSDORG00000003515	Chd7	67	78.728	Dipodomys_ordii
ENSXMAG00000018590	chd7	55	77.067	ENSETEG00000016689	-	52	77.813	Echinops_telfairi
ENSXMAG00000018590	chd7	54	67.442	ENSEBUG00000007607	chd8	63	70.184	Eptatretus_burgeri
ENSXMAG00000018590	chd7	72	79.856	ENSECAG00000001445	CHD7	75	79.042	Equus_caballus
ENSXMAG00000018590	chd7	77	84.211	ENSEEUG00000013559	CHD7	69	78.531	Erinaceus_europaeus
ENSXMAG00000018590	chd7	94	60.617	ENSELUG00000024442	chd7	89	77.704	Esox_lucius
ENSXMAG00000018590	chd7	50	66.891	ENSFCAG00000013859	CHD8	55	69.286	Felis_catus
ENSXMAG00000018590	chd7	71	79.608	ENSFALG00000005570	CHD7	71	79.513	Ficedula_albicollis
ENSXMAG00000018590	chd7	51	58.845	ENSFDAG00000000528	CHD7	71	79.199	Fukomys_damarensis
ENSXMAG00000018590	chd7	100	91.256	ENSFHEG00000001311	chd7	100	91.104	Fundulus_heteroclitus
ENSXMAG00000018590	chd7	60	85.380	ENSGMOG00000004232	chd7	86	85.895	Gadus_morhua
ENSXMAG00000018590	chd7	71	79.686	ENSGALG00000041080	CHD7	71	79.592	Gallus_gallus
ENSXMAG00000018590	chd7	82	97.907	ENSGAFG00000006858	chd7	97	97.907	Gambusia_affinis
ENSXMAG00000018590	chd7	70	81.572	ENSGACG00000014897	chd7	99	79.417	Gasterosteus_aculeatus
ENSXMAG00000018590	chd7	69	81.137	ENSGAGG00000017996	CHD7	85	79.857	Gopherus_agassizii
ENSXMAG00000018590	chd7	69	79.489	ENSGGOG00000012224	CHD7	71	79.121	Gorilla_gorilla
ENSXMAG00000018590	chd7	50	59.666	ENSHBUG00000002850	chd8	59	64.314	Haplochromis_burtoni
ENSXMAG00000018590	chd7	76	85.538	ENSHBUG00000019225	chd7	100	81.821	Haplochromis_burtoni
ENSXMAG00000018590	chd7	98	78.327	ENSHCOG00000014380	chd7	99	79.926	Hippocampus_comes
ENSXMAG00000018590	chd7	52	65.047	ENSIPUG00000019891	chd8	62	64.595	Ictalurus_punctatus
ENSXMAG00000018590	chd7	77	66.233	ENSIPUG00000007585	chd7	96	74.131	Ictalurus_punctatus
ENSXMAG00000018590	chd7	53	66.420	ENSSTOG00000001854	CHD8	54	69.365	Ictidomys_tridecemlineatus
ENSXMAG00000018590	chd7	50	66.125	ENSJJAG00000000408	Chd8	57	69.121	Jaculus_jaculus
ENSXMAG00000018590	chd7	70	79.665	ENSJJAG00000022064	Chd7	67	79.042	Jaculus_jaculus
ENSXMAG00000018590	chd7	99	86.976	ENSKMAG00000009724	chd7	100	85.997	Kryptolebias_marmoratus
ENSXMAG00000018590	chd7	100	79.364	ENSLBEG00000020842	chd7	100	78.981	Labrus_bergylta
ENSXMAG00000018590	chd7	53	67.110	ENSLACG00000011367	CHD8	65	66.981	Latimeria_chalumnae
ENSXMAG00000018590	chd7	63	80.674	ENSLACG00000002461	CHD7	71	79.717	Latimeria_chalumnae
ENSXMAG00000018590	chd7	67	74.639	ENSLOCG00000005062	chd7	70	82.061	Lepisosteus_oculatus
ENSXMAG00000018590	chd7	50	62.000	ENSLAFG00000000403	CHD7	68	78.935	Loxodonta_africana
ENSXMAG00000018590	chd7	69	79.409	ENSMFAG00000041825	CHD7	84	79.042	Macaca_fascicularis
ENSXMAG00000018590	chd7	69	79.409	ENSMMUG00000011584	CHD7	71	79.042	Macaca_mulatta
ENSXMAG00000018590	chd7	69	79.409	ENSMNEG00000040978	CHD7	71	79.042	Macaca_nemestrina
ENSXMAG00000018590	chd7	69	79.409	ENSMLEG00000038817	CHD7	71	79.042	Mandrillus_leucophaeus
ENSXMAG00000018590	chd7	99	81.424	ENSMAMG00000011569	chd7	100	79.501	Mastacembelus_armatus
ENSXMAG00000018590	chd7	50	60.084	ENSMZEG00005012027	chd8	59	65.016	Maylandia_zebra
ENSXMAG00000018590	chd7	76	85.419	ENSMZEG00005010646	chd7	100	81.761	Maylandia_zebra
ENSXMAG00000018590	chd7	71	79.529	ENSMGAG00000011092	CHD7	71	79.435	Meleagris_gallopavo
ENSXMAG00000018590	chd7	84	81.977	ENSMAUG00000001000	Chd7	68	81.890	Mesocricetus_auratus
ENSXMAG00000018590	chd7	69	79.569	ENSMICG00000002430	CHD7	71	79.199	Microcebus_murinus
ENSXMAG00000018590	chd7	52	59.302	ENSMODG00000008488	CHD7	68	79.654	Monodelphis_domestica
ENSXMAG00000018590	chd7	74	83.592	ENSMALG00000004389	chd7	99	83.497	Monopterus_albus
ENSXMAG00000018590	chd7	50	66.494	MGP_CAROLIEiJ_G0019237	Chd8	64	69.524	Mus_caroli
ENSXMAG00000018590	chd7	87	79.585	MGP_CAROLIEiJ_G0025797	Chd7	71	78.964	Mus_caroli
ENSXMAG00000018590	chd7	50	66.494	ENSMUSG00000053754	Chd8	67	63.516	Mus_musculus
ENSXMAG00000018590	chd7	50	62.205	MGP_PahariEiJ_G0023920	Chd7	71	78.964	Mus_pahari
ENSXMAG00000018590	chd7	58	79.569	ENSMPUG00000002338	CHD7	75	79.121	Mustela_putorius_furo
ENSXMAG00000018590	chd7	67	78.254	ENSMLUG00000015266	CHD7	68	76.688	Myotis_lucifugus
ENSXMAG00000018590	chd7	93	62.548	ENSNGAG00000010767	Chd7	71	78.807	Nannospalax_galili
ENSXMAG00000018590	chd7	50	60.224	ENSNBRG00000017428	chd8	58	64.988	Neolamprologus_brichardi
ENSXMAG00000018590	chd7	74	79.608	ENSNBRG00000001280	chd7	66	86.303	Neolamprologus_brichardi
ENSXMAG00000018590	chd7	50	66.346	ENSNLEG00000014445	CHD8	65	69.365	Nomascus_leucogenys
ENSXMAG00000018590	chd7	69	74.790	ENSMEUG00000010045	CHD7	59	74.402	Notamacropus_eugenii
ENSXMAG00000018590	chd7	51	66.667	ENSONIG00000015569	chd8	61	66.667	Oreochromis_niloticus
ENSXMAG00000018590	chd7	98	77.531	ENSONIG00000016614	chd7	100	77.284	Oreochromis_niloticus
ENSXMAG00000018590	chd7	70	79.729	ENSOCUG00000010034	CHD7	83	79.278	Oryctolagus_cuniculus
ENSXMAG00000018590	chd7	98	83.144	ENSORLG00000013492	chd7	99	82.005	Oryzias_latipes
ENSXMAG00000018590	chd7	98	82.691	ENSORLG00020020002	chd7	99	81.620	Oryzias_latipes_hni
ENSXMAG00000018590	chd7	98	83.042	ENSORLG00015020858	chd7	99	81.970	Oryzias_latipes_hsok
ENSXMAG00000018590	chd7	98	82.987	ENSOMEG00000016881	chd7	99	82.047	Oryzias_melastigma
ENSXMAG00000018590	chd7	69	74.917	ENSOARG00000016176	CHD7	70	78.997	Ovis_aries
ENSXMAG00000018590	chd7	69	79.409	ENSPPAG00000033330	CHD7	71	79.042	Pan_paniscus
ENSXMAG00000018590	chd7	50	66.891	ENSPPRG00000006591	CHD8	65	69.286	Panthera_pardus
ENSXMAG00000018590	chd7	69	79.569	ENSPPRG00000022248	CHD7	67	78.869	Panthera_pardus
ENSXMAG00000018590	chd7	50	66.891	ENSPTIG00000021989	CHD8	65	69.286	Panthera_tigris_altaica
ENSXMAG00000018590	chd7	66	78.389	ENSPTIG00000011702	CHD7	70	78.257	Panthera_tigris_altaica
ENSXMAG00000018590	chd7	69	79.409	ENSPTRG00000020286	CHD7	71	79.042	Pan_troglodytes
ENSXMAG00000018590	chd7	69	79.409	ENSPANG00000018419	CHD7	71	79.042	Papio_anubis
ENSXMAG00000018590	chd7	50	66.667	ENSPKIG00000009142	chd8	58	67.151	Paramormyrops_kingsleyae
ENSXMAG00000018590	chd7	77	75.851	ENSPKIG00000009637	chd7	50	75.196	Paramormyrops_kingsleyae
ENSXMAG00000018590	chd7	64	80.112	ENSPSIG00000012003	CHD7	71	79.576	Pelodiscus_sinensis
ENSXMAG00000018590	chd7	74	75.896	ENSPMGG00000018543	chd7	96	85.667	Periophthalmus_magnuspinnatus
ENSXMAG00000018590	chd7	86	80.613	ENSPEMG00000023028	Chd7	72	80.579	Peromyscus_maniculatus_bairdii
ENSXMAG00000018590	chd7	50	66.420	ENSPEMG00000022977	Chd8	60	69.717	Peromyscus_maniculatus_bairdii
ENSXMAG00000018590	chd7	50	67.202	ENSPCIG00000020931	CHD8	70	71.022	Phascolarctos_cinereus
ENSXMAG00000018590	chd7	66	81.214	ENSPCIG00000000025	-	72	79.830	Phascolarctos_cinereus
ENSXMAG00000018590	chd7	100	97.026	ENSPFOG00000004891	chd7	100	100.000	Poecilia_formosa
ENSXMAG00000018590	chd7	58	65.101	ENSPFOG00000010939	-	82	65.457	Poecilia_formosa
ENSXMAG00000018590	chd7	100	96.724	ENSPLAG00000023322	chd7	100	96.724	Poecilia_latipinna
ENSXMAG00000018590	chd7	77	84.088	ENSPMEG00000005879	chd7	99	84.521	Poecilia_mexicana
ENSXMAG00000018590	chd7	58	96.687	ENSPREG00000014744	chd7	80	96.687	Poecilia_reticulata
ENSXMAG00000018590	chd7	50	66.346	ENSPPYG00000005596	CHD8	58	69.365	Pongo_abelii
ENSXMAG00000018590	chd7	69	79.409	ENSPPYG00000018618	CHD7	71	79.042	Pongo_abelii
ENSXMAG00000018590	chd7	75	74.691	ENSPCAG00000000227	CHD7	65	74.647	Procavia_capensis
ENSXMAG00000018590	chd7	50	65.928	ENSPCOG00000014628	CHD8	58	68.232	Propithecus_coquereli
ENSXMAG00000018590	chd7	50	66.867	ENSPVAG00000000272	CHD8	64	69.341	Pteropus_vampyrus
ENSXMAG00000018590	chd7	63	82.481	ENSPVAG00000011873	CHD7	64	82.386	Pteropus_vampyrus
ENSXMAG00000018590	chd7	74	79.383	ENSPNYG00000012490	chd7	99	87.367	Pundamilia_nyererei
ENSXMAG00000018590	chd7	50	59.944	ENSPNYG00000018020	chd8	60	63.551	Pundamilia_nyererei
ENSXMAG00000018590	chd7	62	77.438	ENSPNAG00000011245	chd7	91	77.220	Pygocentrus_nattereri
ENSXMAG00000018590	chd7	93	62.353	ENSRNOG00000006689	Chd7	50	79.278	Rattus_norvegicus
ENSXMAG00000018590	chd7	50	66.272	ENSRNOG00000025011	Chd8	60	69.286	Rattus_norvegicus
ENSXMAG00000018590	chd7	68	78.223	ENSRBIG00000043575	CHD7	71	77.909	Rhinopithecus_bieti
ENSXMAG00000018590	chd7	68	79.506	ENSRROG00000008981	CHD7	71	78.807	Rhinopithecus_roxellana
ENSXMAG00000018590	chd7	50	59.843	ENSSHAG00000011522	CHD7	68	79.749	Sarcophilus_harrisii
ENSXMAG00000018590	chd7	65	76.897	ENSSFOG00015015077	chd7	67	83.086	Scleropages_formosus
ENSXMAG00000018590	chd7	50	59.804	ENSSDUG00000012439	chd8	60	64.701	Seriola_dumerili
ENSXMAG00000018590	chd7	98	82.458	ENSSDUG00000013773	chd7	100	81.272	Seriola_dumerili
ENSXMAG00000018590	chd7	53	80.116	ENSSARG00000003387	CHD7	65	82.959	Sorex_araneus
ENSXMAG00000018590	chd7	77	78.039	ENSSPUG00000009235	CHD7	74	77.865	Sphenodon_punctatus
ENSXMAG00000018590	chd7	76	87.034	ENSSPAG00000006320	chd7	99	85.582	Stegastes_partitus
ENSXMAG00000018590	chd7	63	79.808	ENSTGUG00000011196	CHD7	71	79.435	Taeniopygia_guttata
ENSXMAG00000018590	chd7	67	81.372	ENSTRUG00000008632	chd7	100	79.388	Takifugu_rubripes
ENSXMAG00000018590	chd7	58	91.160	ENSTNIG00000002647	chd7	98	93.333	Tetraodon_nigroviridis
ENSXMAG00000018590	chd7	65	77.879	ENSTTRG00000004221	CHD7	64	77.285	Tursiops_truncatus
ENSXMAG00000018590	chd7	69	76.612	ENSUAMG00000025734	CHD7	76	76.010	Ursus_americanus
ENSXMAG00000018590	chd7	50	66.493	ENSUMAG00000004045	CHD8	71	72.800	Ursus_maritimus
ENSXMAG00000018590	chd7	74	75.765	ENSUMAG00000010436	CHD7	90	77.956	Ursus_maritimus
ENSXMAG00000018590	chd7	70	79.248	ENSXETG00000026004	chd8	74	78.918	Xenopus_tropicalis