EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018673 (Gene tree)
Gene ID: 102226813
Gene Symbol: eif4bb
Alias: fb15c09|wu:fb15c09|zgc:101532
Full Name: eukaryotic translation initiation factor 4B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 16590 bases
Position: chr20:23966539-23983128
Accession: 102226813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018729	RRM_1	PF00076.22	1.6e-12	1	1
ENSXMAP00000034659	RRM_1	PF00076.22	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041448	-	4575	XM_005797964	ENSXMAP00000034659	640 (aa)	XP_005798021	UPI000293B8E9
ENSXMAT00000018757	-	1891	-	ENSXMAP00000018729	608 (aa)	-	M4AW84

Gene Model

Click here to download ENSXMAG00000018673's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma04150	mTOR signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018673's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018673	eif4bb	99	59.480	ENSG00000063046	EIF4B	96	81.461	Homo_sapiens
ENSXMAG00000018673	eif4bb	99	56.773	ENSANAG00000027568	-	82	67.965	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	93	70.642	ENSANAG00000026408	-	96	70.320	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	79	55.464	ENSANAG00000030795	-	72	70.988	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	94	48.529	ENSANAG00000022099	-	53	45.928	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	99	53.435	ENSANAG00000032230	-	91	71.823	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	99	58.877	ENSANAG00000021956	-	58	74.667	Aotus_nancymaae
ENSXMAG00000018673	eif4bb	99	59.636	ENSCJAG00000018176	EIF4B	91	65.546	Callithrix_jacchus
ENSXMAG00000018673	eif4bb	99	45.455	ENSTSYG00000030094	-	88	59.444	Carlito_syrichta
ENSXMAG00000018673	eif4bb	99	53.549	ENSCCAG00000028899	-	83	70.742	Cebus_capucinus
ENSXMAG00000018673	eif4bb	99	57.903	ENSCCAG00000035872	-	58	73.333	Cebus_capucinus
ENSXMAG00000018673	eif4bb	98	55.573	ENSCATG00000032007	-	93	72.951	Cercocebus_atys
ENSXMAG00000018673	eif4bb	99	52.287	ENSCATG00000032438	-	93	72.973	Cercocebus_atys
ENSXMAG00000018673	eif4bb	98	45.354	ENSCATG00000038513	-	92	54.545	Cercocebus_atys
ENSXMAG00000018673	eif4bb	64	34.351	ENSCING00000016816	-	62	39.823	Ciona_intestinalis
ENSXMAG00000018673	eif4bb	99	45.581	ENSCANG00000042944	-	92	72.414	Colobus_angolensis_palliatus
ENSXMAG00000018673	eif4bb	98	79.876	ENSCSEG00000004853	eif4bb	61	87.137	Cynoglossus_semilaevis
ENSXMAG00000018673	eif4bb	100	86.000	ENSCVAG00000021559	eif4bb	54	92.775	Cyprinodon_variegatus
ENSXMAG00000018673	eif4bb	99	64.651	ENSDARG00000010194	eif4bb	89	82.377	Danio_rerio
ENSXMAG00000018673	eif4bb	81	42.231	ENSDNOG00000035736	-	50	52.838	Dasypus_novemcinctus
ENSXMAG00000018673	eif4bb	86	61.802	ENSELUG00000012490	eif4ba	77	78.788	Esox_lucius
ENSXMAG00000018673	eif4bb	100	92.758	ENSFHEG00000006923	eif4bb	100	93.374	Fundulus_heteroclitus
ENSXMAG00000018673	eif4bb	100	98.594	ENSGAFG00000008327	eif4bb	100	98.594	Gambusia_affinis
ENSXMAG00000018673	eif4bb	98	53.532	ENSGGOG00000037011	-	96	69.948	Gorilla_gorilla
ENSXMAG00000018673	eif4bb	99	56.355	ENSGGOG00000004382	-	97	75.000	Gorilla_gorilla
ENSXMAG00000018673	eif4bb	99	59.633	ENSGGOG00000013695	EIF4B	57	73.913	Gorilla_gorilla
ENSXMAG00000018673	eif4bb	99	55.000	ENSSTOG00000006800	-	50	50.000	Ictidomys_tridecemlineatus
ENSXMAG00000018673	eif4bb	98	74.882	ENSLBEG00000020534	eif4bb	74	86.522	Labrus_bergylta
ENSXMAG00000018673	eif4bb	99	47.473	ENSMFAG00000033728	-	92	72.989	Macaca_fascicularis
ENSXMAG00000018673	eif4bb	99	58.104	ENSMFAG00000044995	-	87	80.110	Macaca_fascicularis
ENSXMAG00000018673	eif4bb	99	60.092	ENSMMUG00000001062	EIF4B	85	79.195	Macaca_mulatta
ENSXMAG00000018673	eif4bb	99	56.902	ENSMMUG00000042124	-	91	72.489	Macaca_mulatta
ENSXMAG00000018673	eif4bb	99	43.645	ENSMNEG00000027441	-	58	49.180	Macaca_nemestrina
ENSXMAG00000018673	eif4bb	99	57.645	ENSMNEG00000043577	-	93	73.799	Macaca_nemestrina
ENSXMAG00000018673	eif4bb	99	47.086	ENSMNEG00000041946	-	93	71.023	Macaca_nemestrina
ENSXMAG00000018673	eif4bb	83	75.877	ENSMNEG00000029195	-	99	72.112	Macaca_nemestrina
ENSXMAG00000018673	eif4bb	99	52.134	ENSMLEG00000028830	-	93	72.973	Mandrillus_leucophaeus
ENSXMAG00000018673	eif4bb	96	59.713	ENSMLEG00000033967	-	87	81.215	Mandrillus_leucophaeus
ENSXMAG00000018673	eif4bb	99	54.559	ENSMICG00000033942	-	75	68.508	Microcebus_murinus
ENSXMAG00000018673	eif4bb	99	59.726	ENSMICG00000033915	-	59	73.478	Microcebus_murinus
ENSXMAG00000018673	eif4bb	63	60.714	ENSMOCG00000006053	-	78	78.261	Microtus_ochrogaster
ENSXMAG00000018673	eif4bb	98	59.813	ENSMUSG00000058655	Eif4b	59	75.309	Mus_musculus
ENSXMAG00000018673	eif4bb	99	59.181	ENSNLEG00000017727	EIF4B	58	73.913	Nomascus_leucogenys
ENSXMAG00000018673	eif4bb	98	62.500	ENSNLEG00000027255	-	96	64.069	Nomascus_leucogenys
ENSXMAG00000018673	eif4bb	94	46.515	ENSNLEG00000035400	-	56	54.585	Nomascus_leucogenys
ENSXMAG00000018673	eif4bb	77	55.230	ENSODEG00000011370	-	91	66.484	Octodon_degus
ENSXMAG00000018673	eif4bb	100	79.755	ENSORLG00000016502	eif4bb	100	82.542	Oryzias_latipes
ENSXMAG00000018673	eif4bb	66	66.423	ENSPPAG00000030546	-	58	75.309	Pan_paniscus
ENSXMAG00000018673	eif4bb	76	71.753	ENSPPAG00000029383	-	82	75.309	Pan_paniscus
ENSXMAG00000018673	eif4bb	97	55.521	ENSPTRG00000050351	-	57	67.490	Pan_troglodytes
ENSXMAG00000018673	eif4bb	99	57.710	ENSPTRG00000040264	-	57	72.840	Pan_troglodytes
ENSXMAG00000018673	eif4bb	97	55.521	ENSPTRG00000043454	-	57	67.490	Pan_troglodytes
ENSXMAG00000018673	eif4bb	99	57.121	ENSPTRG00000043800	-	94	81.714	Pan_troglodytes
ENSXMAG00000018673	eif4bb	93	55.829	ENSPTRG00000043521	-	57	71.574	Pan_troglodytes
ENSXMAG00000018673	eif4bb	99	47.706	ENSPANG00000029637	-	98	69.880	Papio_anubis
ENSXMAG00000018673	eif4bb	98	48.413	ENSPANG00000034874	-	56	58.407	Papio_anubis
ENSXMAG00000018673	eif4bb	99	58.931	ENSPANG00000005737	-	91	75.546	Papio_anubis
ENSXMAG00000018673	eif4bb	85	88.333	ENSPMGG00000022372	eif4bb	95	90.608	Periophthalmus_magnuspinnatus
ENSXMAG00000018673	eif4bb	65	45.291	ENSPMAG00000005947	-	52	58.744	Petromyzon_marinus
ENSXMAG00000018673	eif4bb	100	97.500	ENSPFOG00000002142	eif4bb	100	97.500	Poecilia_formosa
ENSXMAG00000018673	eif4bb	100	97.812	ENSPLAG00000018434	eif4bb	100	97.812	Poecilia_latipinna
ENSXMAG00000018673	eif4bb	100	97.188	ENSPMEG00000003502	eif4bb	99	97.188	Poecilia_mexicana
ENSXMAG00000018673	eif4bb	100	97.812	ENSPREG00000001769	eif4bb	100	97.812	Poecilia_reticulata
ENSXMAG00000018673	eif4bb	81	86.111	ENSPCAG00000001759	EIF4B	64	86.111	Procavia_capensis
ENSXMAG00000018673	eif4bb	99	47.312	ENSRBIG00000032876	-	59	62.656	Rhinopithecus_bieti
ENSXMAG00000018673	eif4bb	99	48.318	ENSRBIG00000024635	-	60	64.220	Rhinopithecus_bieti
ENSXMAG00000018673	eif4bb	71	51.152	ENSRBIG00000038114	-	50	58.257	Rhinopithecus_bieti
ENSXMAG00000018673	eif4bb	99	46.083	ENSRROG00000034314	-	84	73.214	Rhinopithecus_roxellana
ENSXMAG00000018673	eif4bb	66	66.667	ENSRROG00000028884	-	98	77.778	Rhinopithecus_roxellana
ENSXMAG00000018673	eif4bb	98	54.407	ENSSARG00000000838	EIF4B	76	79.429	Sorex_araneus
ENSXMAG00000018673	eif4bb	73	80.000	ENSTBEG00000005423	EIF4B	74	80.000	Tupaia_belangeri
ENSXMAG00000018673	eif4bb	61	80.899	ENSTTRG00000002770	EIF4B	62	80.899	Tursiops_truncatus
ENSXMAG00000018673	eif4bb	99	92.089	ENSXCOG00000017714	eif4bb	100	92.089	Xiphophorus_couchianus