EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7107 bases
Position: chr10:1739649-1746755
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	1	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	2	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	3	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	4	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	5	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	6	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	7	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	8	9
ENSXMAP00000018781	zf-C2H2	PF00096.26	1.1e-49	9	9
ENSXMAP00000018781	zf-met	PF12874.7	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018809	-	1590	-	ENSXMAP00000018781	529 (aa)	-	M4AWD6

Gene Model

Click here to download ENSXMAG00000018743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018743	-	96	50.000	ENSAPOG00000018015	si:dkey-89b17.4	92	38.692	Acanthochromis_polyacanthus
ENSXMAG00000018743	-	93	44.444	ENSAPOG00000020151	znf646	98	50.000	Acanthochromis_polyacanthus
ENSXMAG00000018743	-	96	55.556	ENSACIG00000001025	si:dkey-89b17.4	98	38.965	Amphilophus_citrinellus
ENSXMAG00000018743	-	95	47.688	ENSACIG00000023049	znf646	96	47.688	Amphilophus_citrinellus
ENSXMAG00000018743	-	96	38.147	ENSAOCG00000018684	si:dkey-89b17.4	97	38.692	Amphiprion_ocellaris
ENSXMAG00000018743	-	93	44.322	ENSAOCG00000012062	znf646	98	43.268	Amphiprion_ocellaris
ENSXMAG00000018743	-	93	44.322	ENSAPEG00000006427	znf646	98	43.419	Amphiprion_percula
ENSXMAG00000018743	-	96	38.147	ENSAPEG00000007719	si:dkey-89b17.4	97	38.692	Amphiprion_percula
ENSXMAG00000018743	-	96	38.547	ENSATEG00000016814	si:dkey-89b17.4	97	39.106	Anabas_testudineus
ENSXMAG00000018743	-	96	54.762	ENSATEG00000015206	znf646	98	43.333	Anabas_testudineus
ENSXMAG00000018743	-	96	42.879	ENSACLG00000012712	znf646	93	42.178	Astatotilapia_calliptera
ENSXMAG00000018743	-	96	38.420	ENSACLG00000016017	si:dkey-89b17.4	97	38.965	Astatotilapia_calliptera
ENSXMAG00000018743	-	96	37.838	ENSAMXG00000035525	znf646	92	45.833	Astyanax_mexicanus
ENSXMAG00000018743	-	95	46.377	ENSAMXG00000001155	si:dkey-89b17.4	95	46.377	Astyanax_mexicanus
ENSXMAG00000018743	-	96	43.186	ENSCSEG00000012389	znf646	92	45.221	Cynoglossus_semilaevis
ENSXMAG00000018743	-	94	38.587	ENSCSEG00000010769	si:dkey-89b17.4	96	50.769	Cynoglossus_semilaevis
ENSXMAG00000018743	-	93	39.247	ENSCVAG00000012420	si:dkey-89b17.4	97	38.710	Cyprinodon_variegatus
ENSXMAG00000018743	-	95	50.588	ENSDARG00000061424	znf646	99	51.807	Danio_rerio
ENSXMAG00000018743	-	96	49.275	ENSDARG00000075545	si:dkey-89b17.4	97	48.571	Danio_rerio
ENSXMAG00000018743	-	95	42.412	ENSELUG00000015516	si:dkey-89b17.4	97	42.636	Esox_lucius
ENSXMAG00000018743	-	98	41.333	ENSELUG00000010423	znf646	99	38.450	Esox_lucius
ENSXMAG00000018743	-	97	55.633	ENSFHEG00000000561	znf646	98	56.326	Fundulus_heteroclitus
ENSXMAG00000018743	-	94	38.710	ENSFHEG00000019457	si:dkey-89b17.4	97	32.827	Fundulus_heteroclitus
ENSXMAG00000018743	-	96	56.660	ENSGMOG00000016554	znf646	99	56.660	Gadus_morhua
ENSXMAG00000018743	-	88	95.631	ENSGAFG00000016353	-	88	95.631	Gambusia_affinis
ENSXMAG00000018743	-	96	38.710	ENSGAFG00000000345	si:dkey-89b17.4	97	39.247	Gambusia_affinis
ENSXMAG00000018743	-	96	57.339	ENSGACG00000008733	znf646	99	57.339	Gasterosteus_aculeatus
ENSXMAG00000018743	-	96	76.852	ENSGACG00000014714	si:dkey-89b17.4	100	36.201	Gasterosteus_aculeatus
ENSXMAG00000018743	-	96	43.032	ENSHBUG00000004840	znf646	99	43.023	Haplochromis_burtoni
ENSXMAG00000018743	-	96	38.420	ENSHBUG00000013093	si:dkey-89b17.4	97	38.965	Haplochromis_burtoni
ENSXMAG00000018743	-	95	54.762	ENSHCOG00000014890	znf646	97	54.762	Hippocampus_comes
ENSXMAG00000018743	-	94	41.627	ENSHCOG00000001901	si:dkey-89b17.4	97	41.561	Hippocampus_comes
ENSXMAG00000018743	-	91	61.654	ENSIPUG00000012830	-	83	60.902	Ictalurus_punctatus
ENSXMAG00000018743	-	92	51.613	ENSIPUG00000012845	si:dkey-89b17.4	85	39.779	Ictalurus_punctatus
ENSXMAG00000018743	-	96	39.720	ENSIPUG00000018102	znf646	97	39.720	Ictalurus_punctatus
ENSXMAG00000018743	-	96	38.420	ENSKMAG00000014037	si:dkey-89b17.4	97	38.420	Kryptolebias_marmoratus
ENSXMAG00000018743	-	94	54.085	ENSKMAG00000011982	znf646	98	55.882	Kryptolebias_marmoratus
ENSXMAG00000018743	-	96	43.548	ENSLBEG00000016562	znf646	99	43.548	Labrus_bergylta
ENSXMAG00000018743	-	94	38.420	ENSLBEG00000020291	si:dkey-89b17.4	97	38.965	Labrus_bergylta
ENSXMAG00000018743	-	96	32.511	ENSLOCG00000003238	si:dkey-89b17.4	96	32.717	Lepisosteus_oculatus
ENSXMAG00000018743	-	96	38.147	ENSMAMG00000009604	si:dkey-89b17.4	97	38.692	Mastacembelus_armatus
ENSXMAG00000018743	-	93	45.197	ENSMAMG00000009313	znf646	88	49.842	Mastacembelus_armatus
ENSXMAG00000018743	-	96	38.420	ENSMZEG00005003901	si:dkey-89b17.4	97	38.965	Maylandia_zebra
ENSXMAG00000018743	-	93	47.632	ENSMZEG00005011264	znf646	93	47.632	Maylandia_zebra
ENSXMAG00000018743	-	96	53.968	ENSMMOG00000012741	si:dkey-89b17.4	97	38.043	Mola_mola
ENSXMAG00000018743	-	96	49.852	ENSMMOG00000002311	znf646	98	49.852	Mola_mola
ENSXMAG00000018743	-	96	41.121	ENSMALG00000019558	si:dkey-89b17.4	97	38.692	Monopterus_albus
ENSXMAG00000018743	-	93	43.810	ENSMALG00000002274	-	99	34.218	Monopterus_albus
ENSXMAG00000018743	-	96	42.726	ENSNBRG00000022534	znf646	93	42.025	Neolamprologus_brichardi
ENSXMAG00000018743	-	96	35.703	ENSNBRG00000020314	si:dkey-89b17.4	99	33.384	Neolamprologus_brichardi
ENSXMAG00000018743	-	93	44.782	ENSONIG00000019947	-	100	44.782	Oreochromis_niloticus
ENSXMAG00000018743	-	95	45.601	ENSONIG00000009324	si:dkey-89b17.4	97	45.601	Oreochromis_niloticus
ENSXMAG00000018743	-	94	38.043	ENSORLG00000024255	si:dkey-89b17.4	98	41.315	Oryzias_latipes
ENSXMAG00000018743	-	94	43.546	ENSORLG00000007885	znf646	97	41.991	Oryzias_latipes
ENSXMAG00000018743	-	97	43.235	ENSORLG00020010285	znf646	97	41.991	Oryzias_latipes_hni
ENSXMAG00000018743	-	97	50.078	ENSORLG00015008733	znf646	97	49.451	Oryzias_latipes_hsok
ENSXMAG00000018743	-	96	41.158	ENSOMEG00000020587	si:dkey-89b17.4	98	41.158	Oryzias_melastigma
ENSXMAG00000018743	-	96	46.591	ENSOMEG00000015658	znf646	99	46.591	Oryzias_melastigma
ENSXMAG00000018743	-	96	38.202	ENSPMGG00000015931	-	90	38.202	Periophthalmus_magnuspinnatus
ENSXMAG00000018743	-	96	53.030	ENSPMGG00000004639	znf646	98	53.030	Periophthalmus_magnuspinnatus
ENSXMAG00000018743	-	96	38.710	ENSPFOG00000008241	si:dkey-89b17.4	98	39.247	Poecilia_formosa
ENSXMAG00000018743	-	96	58.191	ENSPFOG00000004826	-	99	58.191	Poecilia_formosa
ENSXMAG00000018743	-	96	91.481	ENSPLAG00000010454	-	98	91.481	Poecilia_latipinna
ENSXMAG00000018743	-	96	38.710	ENSPLAG00000011382	si:dkey-89b17.4	97	39.247	Poecilia_latipinna
ENSXMAG00000018743	-	96	38.710	ENSPMEG00000000141	si:dkey-89b17.4	97	39.247	Poecilia_mexicana
ENSXMAG00000018743	-	96	91.684	ENSPMEG00000018283	znf646	98	91.684	Poecilia_mexicana
ENSXMAG00000018743	-	95	93.929	ENSPREG00000017637	znf646	97	93.929	Poecilia_reticulata
ENSXMAG00000018743	-	96	38.710	ENSPREG00000012579	si:dkey-89b17.4	97	39.247	Poecilia_reticulata
ENSXMAG00000018743	-	96	38.420	ENSPNYG00000011901	si:dkey-89b17.4	97	38.420	Pundamilia_nyererei
ENSXMAG00000018743	-	96	43.032	ENSPNYG00000017692	znf646	93	42.331	Pundamilia_nyererei
ENSXMAG00000018743	-	96	37.519	ENSPNAG00000000750	znf646	97	52.941	Pygocentrus_nattereri
ENSXMAG00000018743	-	92	51.613	ENSPNAG00000022072	si:dkey-89b17.4	97	39.560	Pygocentrus_nattereri
ENSXMAG00000018743	-	97	40.152	ENSSFOG00015004737	si:dkey-89b17.4	98	41.313	Scleropages_formosus
ENSXMAG00000018743	-	94	43.465	ENSSMAG00000012378	znf646	98	42.992	Scophthalmus_maximus
ENSXMAG00000018743	-	95	46.457	ENSSDUG00000002675	znf646	98	43.396	Seriola_dumerili
ENSXMAG00000018743	-	96	38.172	ENSSDUG00000015931	si:dkey-89b17.4	98	38.692	Seriola_dumerili
ENSXMAG00000018743	-	96	38.172	ENSSLDG00000012415	si:dkey-89b17.4	98	38.692	Seriola_lalandi_dorsalis
ENSXMAG00000018743	-	95	46.457	ENSSLDG00000018521	znf646	98	43.396	Seriola_lalandi_dorsalis
ENSXMAG00000018743	-	93	50.237	ENSSPAG00000016701	znf646	98	43.533	Stegastes_partitus
ENSXMAG00000018743	-	94	51.562	ENSSPAG00000018810	si:dkey-89b17.4	97	38.692	Stegastes_partitus
ENSXMAG00000018743	-	94	48.889	ENSTRUG00000025597	znf646	98	49.681	Takifugu_rubripes
ENSXMAG00000018743	-	96	36.757	ENSTRUG00000020495	si:dkey-89b17.4	90	53.968	Takifugu_rubripes
ENSXMAG00000018743	-	96	41.652	ENSTNIG00000001159	si:dkey-89b17.4	99	41.652	Tetraodon_nigroviridis
ENSXMAG00000018743	-	98	51.751	ENSTNIG00000000073	znf646	97	51.751	Tetraodon_nigroviridis
ENSXMAG00000018743	-	96	55.556	ENSXCOG00000001645	si:dkey-89b17.4	98	40.966	Xiphophorus_couchianus
ENSXMAG00000018743	-	100	97.353	ENSXCOG00000002714	-	100	97.353	Xiphophorus_couchianus
ENSXMAG00000018743	-	96	40.498	ENSXMAG00000024528	si:dkey-89b17.4	98	38.710	Xiphophorus_maculatus