EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018749 (Gene tree)
Gene ID: 102217785
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8554 bases
Position: chr8:25433442-25441995
Accession: 102217785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035584	ResIII	PF04851.15	9.1e-09	1	1
ENSXMAP00000018799	ResIII	PF04851.15	9.8e-09	1	1
ENSXMAP00000035584	DEAD	PF00270.29	9.6e-40	1	1
ENSXMAP00000018799	DEAD	PF00270.29	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018827	-	1741	XM_005806855	ENSXMAP00000018799	557 (aa)	XP_005806912	M4AWF4
ENSXMAT00000035521	-	1611	-	ENSXMAP00000035584	536 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000018749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018749	ddx56	97	64.126	ENSG00000136271	DDX56	98	68.508	Homo_sapiens
ENSXMAG00000018749	ddx56	100	85.205	ENSAPOG00000017113	ddx56	100	85.205	Acanthochromis_polyacanthus
ENSXMAG00000018749	ddx56	97	63.060	ENSAMEG00000017711	DDX56	97	63.370	Ailuropoda_melanoleuca
ENSXMAG00000018749	ddx56	95	72.744	ENSACIG00000013747	ddx56	99	89.011	Amphilophus_citrinellus
ENSXMAG00000018749	ddx56	96	85.493	ENSAOCG00000018059	ddx56	94	88.024	Amphiprion_ocellaris
ENSXMAG00000018749	ddx56	90	87.910	ENSAOCG00000015447	-	87	88.320	Amphiprion_ocellaris
ENSXMAG00000018749	ddx56	100	84.409	ENSAPEG00000007267	ddx56	100	84.409	Amphiprion_percula
ENSXMAG00000018749	ddx56	99	82.616	ENSATEG00000005279	ddx56	99	82.616	Anabas_testudineus
ENSXMAG00000018749	ddx56	100	81.640	ENSACLG00000020113	ddx56	100	81.883	Astatotilapia_calliptera
ENSXMAG00000018749	ddx56	99	75.404	ENSAMXG00000019357	ddx56	99	75.943	Astyanax_mexicanus
ENSXMAG00000018749	ddx56	97	64.404	ENSBTAG00000010602	DDX56	97	64.954	Bos_taurus
ENSXMAG00000018749	ddx56	97	39.606	WBGene00016073	C24H12.4	86	39.606	Caenorhabditis_elegans
ENSXMAG00000018749	ddx56	97	64.312	ENSCJAG00000012233	DDX56	99	63.636	Callithrix_jacchus
ENSXMAG00000018749	ddx56	80	60.682	ENSCAFG00000029295	DDX56	98	60.927	Canis_familiaris
ENSXMAG00000018749	ddx56	97	63.498	ENSCAFG00020019695	DDX56	97	63.327	Canis_lupus_dingo
ENSXMAG00000018749	ddx56	98	63.653	ENSCHIG00000014261	DDX56	98	63.653	Capra_hircus
ENSXMAG00000018749	ddx56	97	64.037	ENSTSYG00000008048	DDX56	97	64.587	Carlito_syrichta
ENSXMAG00000018749	ddx56	85	63.347	ENSCAPG00000006286	DDX56	99	62.845	Cavia_aperea
ENSXMAG00000018749	ddx56	97	65.177	ENSCPOG00000003359	DDX56	99	64.706	Cavia_porcellus
ENSXMAG00000018749	ddx56	99	62.909	ENSCCAG00000025303	DDX56	99	62.909	Cebus_capucinus
ENSXMAG00000018749	ddx56	97	64.246	ENSCATG00000039389	DDX56	97	64.246	Cercocebus_atys
ENSXMAG00000018749	ddx56	99	64.234	ENSCLAG00000007666	DDX56	99	64.416	Chinchilla_lanigera
ENSXMAG00000018749	ddx56	97	64.126	ENSCSAG00000015636	DDX56	97	64.126	Chlorocebus_sabaeus
ENSXMAG00000018749	ddx56	99	69.495	ENSCPBG00000024556	DDX56	99	69.495	Chrysemys_picta_bellii
ENSXMAG00000018749	ddx56	92	60.400	ENSCING00000005185	-	98	60.236	Ciona_intestinalis
ENSXMAG00000018749	ddx56	92	60.200	ENSCSAVG00000011266	-	99	60.000	Ciona_savignyi
ENSXMAG00000018749	ddx56	97	64.126	ENSCANG00000028187	DDX56	97	64.126	Colobus_angolensis_palliatus
ENSXMAG00000018749	ddx56	97	65.138	ENSCGRG00001019019	Ddx56	97	65.138	Cricetulus_griseus_chok1gshd
ENSXMAG00000018749	ddx56	97	65.138	ENSCGRG00000011870	Ddx56	97	65.138	Cricetulus_griseus_crigri
ENSXMAG00000018749	ddx56	100	80.749	ENSCSEG00000008368	ddx56	100	80.749	Cynoglossus_semilaevis
ENSXMAG00000018749	ddx56	100	91.935	ENSCVAG00000006499	ddx56	100	92.115	Cyprinodon_variegatus
ENSXMAG00000018749	ddx56	99	80.360	ENSDARG00000020913	ddx56	99	80.541	Danio_rerio
ENSXMAG00000018749	ddx56	85	63.291	ENSDNOG00000036526	DDX56	96	63.158	Dasypus_novemcinctus
ENSXMAG00000018749	ddx56	97	50.273	FBgn0001565	Hlc	96	50.273	Drosophila_melanogaster
ENSXMAG00000018749	ddx56	66	76.389	ENSETEG00000002969	-	64	76.389	Echinops_telfairi
ENSXMAG00000018749	ddx56	89	43.187	ENSETEG00000019559	-	100	43.096	Echinops_telfairi
ENSXMAG00000018749	ddx56	97	66.120	ENSEBUG00000009986	ddx56	98	66.485	Eptatretus_burgeri
ENSXMAG00000018749	ddx56	97	63.315	ENSEASG00005017795	DDX56	97	63.736	Equus_asinus_asinus
ENSXMAG00000018749	ddx56	97	63.128	ENSECAG00000019897	DDX56	97	63.553	Equus_caballus
ENSXMAG00000018749	ddx56	84	63.482	ENSEEUG00000004849	DDX56	98	61.966	Erinaceus_europaeus
ENSXMAG00000018749	ddx56	100	80.610	ENSELUG00000004150	ddx56	100	80.610	Esox_lucius
ENSXMAG00000018749	ddx56	97	63.178	ENSFCAG00000010261	DDX56	97	63.303	Felis_catus
ENSXMAG00000018749	ddx56	99	63.472	ENSFDAG00000007128	DDX56	98	63.603	Fukomys_damarensis
ENSXMAG00000018749	ddx56	100	89.054	ENSFHEG00000018008	ddx56	96	93.360	Fundulus_heteroclitus
ENSXMAG00000018749	ddx56	100	91.418	ENSGAFG00000006906	ddx56	99	91.418	Gambusia_affinis
ENSXMAG00000018749	ddx56	91	73.428	ENSGAGG00000006789	DDX56	91	71.484	Gopherus_agassizii
ENSXMAG00000018749	ddx56	97	64.126	ENSGGOG00000012031	DDX56	97	64.126	Gorilla_gorilla
ENSXMAG00000018749	ddx56	95	77.903	ENSHBUG00000015246	ddx56	96	78.172	Haplochromis_burtoni
ENSXMAG00000018749	ddx56	99	62.956	ENSHGLG00000017271	DDX56	99	62.956	Heterocephalus_glaber_female
ENSXMAG00000018749	ddx56	99	62.956	ENSHGLG00100015731	DDX56	99	62.956	Heterocephalus_glaber_male
ENSXMAG00000018749	ddx56	99	82.162	ENSHCOG00000001685	ddx56	99	81.688	Hippocampus_comes
ENSXMAG00000018749	ddx56	99	74.865	ENSIPUG00000006602	ddx56	98	75.943	Ictalurus_punctatus
ENSXMAG00000018749	ddx56	97	64.739	ENSSTOG00000000464	DDX56	97	64.739	Ictidomys_tridecemlineatus
ENSXMAG00000018749	ddx56	97	64.587	ENSJJAG00000014269	Ddx56	98	64.179	Jaculus_jaculus
ENSXMAG00000018749	ddx56	100	87.011	ENSKMAG00000016611	ddx56	99	87.189	Kryptolebias_marmoratus
ENSXMAG00000018749	ddx56	99	83.721	ENSLBEG00000026281	ddx56	100	83.721	Labrus_bergylta
ENSXMAG00000018749	ddx56	98	72.000	ENSLACG00000015551	DDX56	97	72.232	Latimeria_chalumnae
ENSXMAG00000018749	ddx56	99	78.058	ENSLOCG00000015185	ddx56	98	78.957	Lepisosteus_oculatus
ENSXMAG00000018749	ddx56	98	64.545	ENSLAFG00000018206	DDX56	98	64.545	Loxodonta_africana
ENSXMAG00000018749	ddx56	97	64.432	ENSMFAG00000041001	DDX56	97	64.432	Macaca_fascicularis
ENSXMAG00000018749	ddx56	97	64.432	ENSMMUG00000002645	DDX56	97	64.432	Macaca_mulatta
ENSXMAG00000018749	ddx56	97	64.432	ENSMNEG00000028492	DDX56	97	64.432	Macaca_nemestrina
ENSXMAG00000018749	ddx56	97	64.060	ENSMLEG00000043591	DDX56	97	64.060	Mandrillus_leucophaeus
ENSXMAG00000018749	ddx56	100	82.500	ENSMAMG00000007776	ddx56	99	82.384	Mastacembelus_armatus
ENSXMAG00000018749	ddx56	100	81.640	ENSMZEG00005009813	ddx56	100	81.883	Maylandia_zebra
ENSXMAG00000018749	ddx56	99	63.787	ENSMICG00000005550	DDX56	99	63.949	Microcebus_murinus
ENSXMAG00000018749	ddx56	97	63.486	ENSMOCG00000016782	Ddx56	97	63.486	Microtus_ochrogaster
ENSXMAG00000018749	ddx56	96	84.483	ENSMMOG00000009654	ddx56	98	85.249	Mola_mola
ENSXMAG00000018749	ddx56	98	60.036	ENSMODG00000016137	DDX56	97	59.854	Monodelphis_domestica
ENSXMAG00000018749	ddx56	70	78.684	ENSMALG00000016910	ddx56	99	78.421	Monopterus_albus
ENSXMAG00000018749	ddx56	99	62.500	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.339	Mus_caroli
ENSXMAG00000018749	ddx56	99	62.681	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSXMAG00000018749	ddx56	97	63.303	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSXMAG00000018749	ddx56	99	62.681	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSXMAG00000018749	ddx56	97	62.842	ENSMPUG00000018196	DDX56	86	62.842	Mustela_putorius_furo
ENSXMAG00000018749	ddx56	97	63.178	ENSMLUG00000003509	DDX56	97	63.670	Myotis_lucifugus
ENSXMAG00000018749	ddx56	99	65.217	ENSNGAG00000018785	Ddx56	99	64.674	Nannospalax_galili
ENSXMAG00000018749	ddx56	95	79.473	ENSNBRG00000002656	ddx56	96	79.284	Neolamprologus_brichardi
ENSXMAG00000018749	ddx56	98	64.641	ENSNLEG00000003816	DDX56	98	64.641	Nomascus_leucogenys
ENSXMAG00000018749	ddx56	92	61.245	ENSMEUG00000006788	DDX56	99	61.446	Notamacropus_eugenii
ENSXMAG00000018749	ddx56	98	62.250	ENSOPRG00000000292	-	98	62.247	Ochotona_princeps
ENSXMAG00000018749	ddx56	70	67.819	ENSODEG00000014807	DDX56	99	68.085	Octodon_degus
ENSXMAG00000018749	ddx56	100	79.892	ENSONIG00000011509	ddx56	99	80.072	Oreochromis_niloticus
ENSXMAG00000018749	ddx56	96	56.691	ENSOANG00000006320	-	99	56.506	Ornithorhynchus_anatinus
ENSXMAG00000018749	ddx56	75	57.248	ENSOANG00000015987	-	94	57.248	Ornithorhynchus_anatinus
ENSXMAG00000018749	ddx56	51	65.328	ENSOANG00000010592	-	99	64.234	Ornithorhynchus_anatinus
ENSXMAG00000018749	ddx56	98	63.720	ENSOCUG00000022918	DDX56	98	63.884	Oryctolagus_cuniculus
ENSXMAG00000018749	ddx56	100	85.663	ENSORLG00000001434	ddx56	100	85.663	Oryzias_latipes
ENSXMAG00000018749	ddx56	100	85.484	ENSORLG00020015718	ddx56	97	85.484	Oryzias_latipes_hni
ENSXMAG00000018749	ddx56	99	85.637	ENSORLG00015003004	ddx56	96	85.637	Oryzias_latipes_hsok
ENSXMAG00000018749	ddx56	100	85.484	ENSOMEG00000022072	ddx56	99	85.663	Oryzias_melastigma
ENSXMAG00000018749	ddx56	97	63.873	ENSOGAG00000009981	DDX56	97	64.246	Otolemur_garnettii
ENSXMAG00000018749	ddx56	97	64.771	ENSOARG00000015240	DDX56	97	64.771	Ovis_aries
ENSXMAG00000018749	ddx56	97	61.441	ENSPPAG00000029147	DDX56	97	61.441	Pan_paniscus
ENSXMAG00000018749	ddx56	99	53.025	ENSPPAG00000031263	-	99	52.669	Pan_paniscus
ENSXMAG00000018749	ddx56	97	63.128	ENSPPRG00000014594	DDX56	97	63.303	Panthera_pardus
ENSXMAG00000018749	ddx56	94	55.871	ENSPTIG00000019500	DDX56	97	55.682	Panthera_tigris_altaica
ENSXMAG00000018749	ddx56	94	52.434	ENSPTRG00000052765	-	99	53.371	Pan_troglodytes
ENSXMAG00000018749	ddx56	97	64.126	ENSPTRG00000019147	DDX56	97	64.126	Pan_troglodytes
ENSXMAG00000018749	ddx56	97	64.060	ENSPANG00000002446	DDX56	97	64.060	Papio_anubis
ENSXMAG00000018749	ddx56	100	76.703	ENSPKIG00000018998	ddx56	99	76.523	Paramormyrops_kingsleyae
ENSXMAG00000018749	ddx56	95	83.774	ENSPMGG00000017421	ddx56	99	83.774	Periophthalmus_magnuspinnatus
ENSXMAG00000018749	ddx56	98	66.058	ENSPCIG00000009336	DDX56	97	65.876	Phascolarctos_cinereus
ENSXMAG00000018749	ddx56	100	97.312	ENSPFOG00000018658	ddx56	100	97.312	Poecilia_formosa
ENSXMAG00000018749	ddx56	100	97.491	ENSPLAG00000019208	ddx56	100	97.491	Poecilia_latipinna
ENSXMAG00000018749	ddx56	100	97.312	ENSPMEG00000001775	ddx56	100	97.312	Poecilia_mexicana
ENSXMAG00000018749	ddx56	100	97.133	ENSPREG00000015142	ddx56	100	97.133	Poecilia_reticulata
ENSXMAG00000018749	ddx56	97	64.126	ENSPPYG00000017591	DDX56	97	64.126	Pongo_abelii
ENSXMAG00000018749	ddx56	97	63.720	ENSPCAG00000011499	DDX56	99	63.720	Procavia_capensis
ENSXMAG00000018749	ddx56	97	64.432	ENSPCOG00000024864	DDX56	97	64.432	Propithecus_coquereli
ENSXMAG00000018749	ddx56	86	69.194	ENSPVAG00000000791	DDX56	85	69.194	Pteropus_vampyrus
ENSXMAG00000018749	ddx56	100	81.462	ENSPNYG00000019212	ddx56	100	81.705	Pundamilia_nyererei
ENSXMAG00000018749	ddx56	99	78.571	ENSPNAG00000025446	ddx56	99	78.571	Pygocentrus_nattereri
ENSXMAG00000018749	ddx56	97	63.670	ENSRNOG00000004670	Ddx56	97	63.670	Rattus_norvegicus
ENSXMAG00000018749	ddx56	97	64.312	ENSRBIG00000030140	DDX56	97	64.312	Rhinopithecus_bieti
ENSXMAG00000018749	ddx56	97	64.126	ENSRROG00000044428	DDX56	97	64.126	Rhinopithecus_roxellana
ENSXMAG00000018749	ddx56	96	43.643	YLR276C	-	97	44.330	Saccharomyces_cerevisiae
ENSXMAG00000018749	ddx56	97	63.941	ENSSBOG00000034339	DDX56	99	63.273	Saimiri_boliviensis_boliviensis
ENSXMAG00000018749	ddx56	85	64.990	ENSSHAG00000016615	DDX56	98	64.780	Sarcophilus_harrisii
ENSXMAG00000018749	ddx56	100	76.607	ENSSFOG00015012795	ddx56	100	76.607	Scleropages_formosus
ENSXMAG00000018749	ddx56	100	83.304	ENSSMAG00000011280	ddx56	99	85.075	Scophthalmus_maximus
ENSXMAG00000018749	ddx56	100	84.520	ENSSDUG00000023597	ddx56	100	84.520	Seriola_dumerili
ENSXMAG00000018749	ddx56	100	84.342	ENSSLDG00000018369	ddx56	100	84.342	Seriola_lalandi_dorsalis
ENSXMAG00000018749	ddx56	74	77.586	ENSSARG00000014363	DDX56	77	72.464	Sorex_araneus
ENSXMAG00000018749	ddx56	98	71.869	ENSSPUG00000000784	DDX56	95	70.727	Sphenodon_punctatus
ENSXMAG00000018749	ddx56	95	87.079	ENSSPAG00000009392	ddx56	99	87.453	Stegastes_partitus
ENSXMAG00000018749	ddx56	98	63.158	ENSSSCG00000016745	DDX56	98	64.037	Sus_scrofa
ENSXMAG00000018749	ddx56	100	82.832	ENSTRUG00000018623	ddx56	100	82.832	Takifugu_rubripes
ENSXMAG00000018749	ddx56	100	82.042	ENSTNIG00000013593	ddx56	100	82.042	Tetraodon_nigroviridis
ENSXMAG00000018749	ddx56	99	63.670	ENSTBEG00000007119	DDX56	98	63.670	Tupaia_belangeri
ENSXMAG00000018749	ddx56	84	62.554	ENSTTRG00000010552	DDX56	97	62.553	Tursiops_truncatus
ENSXMAG00000018749	ddx56	97	63.246	ENSUAMG00000014194	DDX56	97	63.736	Ursus_americanus
ENSXMAG00000018749	ddx56	97	63.246	ENSUMAG00000009666	DDX56	97	63.736	Ursus_maritimus
ENSXMAG00000018749	ddx56	97	62.500	ENSVVUG00000011905	DDX56	97	63.004	Vulpes_vulpes
ENSXMAG00000018749	ddx56	99	71.196	ENSXETG00000019000	ddx56	99	71.712	Xenopus_tropicalis
ENSXMAG00000018749	ddx56	100	97.761	ENSXCOG00000017413	ddx56	99	97.761	Xiphophorus_couchianus