EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018780 (Gene tree)
Gene ID: 102219014
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 36867 bases
Position: chr11:8132258-8169124
Accession: 102219014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018834	La	PF05383.17	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018862	-	3282	XM_014474656	ENSXMAP00000018834	1093 (aa)	XP_014330142	M4AWI9

Gene Model

Click here to download ENSXMAG00000018780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018780	larp1	85	67.962	ENSG00000155506	LARP1	90	81.212	Homo_sapiens
ENSXMAG00000018780	larp1	90	94.118	ENSAPOG00000020685	larp1	98	95.755	Acanthochromis_polyacanthus
ENSXMAG00000018780	larp1	85	67.779	ENSAMEG00000016673	LARP1	96	67.675	Ailuropoda_melanoleuca
ENSXMAG00000018780	larp1	100	73.698	ENSACIG00000012994	larp1	100	72.980	Amphilophus_citrinellus
ENSXMAG00000018780	larp1	77	86.199	ENSAOCG00000007792	larp1	100	86.199	Amphiprion_ocellaris
ENSXMAG00000018780	larp1	100	84.832	ENSAPEG00000022246	larp1	100	84.559	Amphiprion_percula
ENSXMAG00000018780	larp1	97	82.759	ENSATEG00000013523	larp1	100	82.543	Anabas_testudineus
ENSXMAG00000018780	larp1	82	70.151	ENSAPLG00000007559	LARP1	100	69.989	Anas_platyrhynchos
ENSXMAG00000018780	larp1	89	67.198	ENSACAG00000004071	LARP1	97	70.000	Anolis_carolinensis
ENSXMAG00000018780	larp1	85	67.610	ENSANAG00000029949	LARP1	96	65.068	Aotus_nancymaae
ENSXMAG00000018780	larp1	100	82.946	ENSACLG00000015256	larp1	99	85.569	Astatotilapia_calliptera
ENSXMAG00000018780	larp1	97	74.157	ENSAMXG00000000859	larp1	98	74.036	Astyanax_mexicanus
ENSXMAG00000018780	larp1	96	63.096	ENSBTAG00000008443	LARP1	97	63.040	Bos_taurus
ENSXMAG00000018780	larp1	96	62.703	ENSCJAG00000004454	LARP1	97	63.645	Callithrix_jacchus
ENSXMAG00000018780	larp1	85	68.058	ENSCAFG00000017639	LARP1	97	67.745	Canis_familiaris
ENSXMAG00000018780	larp1	77	71.001	ENSCAFG00020023860	LARP1	95	70.656	Canis_lupus_dingo
ENSXMAG00000018780	larp1	96	63.346	ENSCHIG00000014414	LARP1	97	62.192	Capra_hircus
ENSXMAG00000018780	larp1	87	67.513	ENSTSYG00000013732	LARP1	96	65.828	Carlito_syrichta
ENSXMAG00000018780	larp1	74	69.952	ENSCAPG00000013865	LARP1	83	67.788	Cavia_aperea
ENSXMAG00000018780	larp1	84	68.658	ENSCPOG00000003377	LARP1	96	68.344	Cavia_porcellus
ENSXMAG00000018780	larp1	96	62.342	ENSCCAG00000025201	LARP1	97	63.669	Cebus_capucinus
ENSXMAG00000018780	larp1	96	60.685	ENSCATG00000030675	LARP1	97	61.510	Cercocebus_atys
ENSXMAG00000018780	larp1	87	67.107	ENSCLAG00000012755	LARP1	96	66.178	Chinchilla_lanigera
ENSXMAG00000018780	larp1	77	67.630	ENSCSAG00000010800	LARP1	95	67.746	Chlorocebus_sabaeus
ENSXMAG00000018780	larp1	83	65.154	ENSCHOG00000012716	LARP1	88	65.140	Choloepus_hoffmanni
ENSXMAG00000018780	larp1	91	69.552	ENSCPBG00000002173	LARP1	90	71.217	Chrysemys_picta_bellii
ENSXMAG00000018780	larp1	85	68.101	ENSCANG00000037418	LARP1	90	67.786	Colobus_angolensis_palliatus
ENSXMAG00000018780	larp1	99	63.330	ENSCGRG00001016913	Larp1	97	64.364	Cricetulus_griseus_chok1gshd
ENSXMAG00000018780	larp1	84	64.799	ENSCGRG00000009916	Larp1	99	64.799	Cricetulus_griseus_crigri
ENSXMAG00000018780	larp1	100	82.098	ENSCSEG00000016431	larp1	100	82.310	Cynoglossus_semilaevis
ENSXMAG00000018780	larp1	99	87.592	ENSCVAG00000022687	larp1	100	88.406	Cyprinodon_variegatus
ENSXMAG00000018780	larp1	92	70.804	ENSDARG00000101722	larp1	93	72.222	Danio_rerio
ENSXMAG00000018780	larp1	99	61.592	ENSDNOG00000012073	LARP1	97	63.101	Dasypus_novemcinctus
ENSXMAG00000018780	larp1	87	62.805	ENSDORG00000002897	Larp1	95	65.236	Dipodomys_ordii
ENSXMAG00000018780	larp1	81	68.450	ENSETEG00000020251	LARP1	100	66.558	Echinops_telfairi
ENSXMAG00000018780	larp1	96	62.738	ENSEASG00005001070	LARP1	97	63.053	Equus_asinus_asinus
ENSXMAG00000018780	larp1	96	62.795	ENSECAG00000017002	LARP1	78	63.704	Equus_caballus
ENSXMAG00000018780	larp1	83	65.166	ENSEEUG00000001065	LARP1	96	65.488	Erinaceus_europaeus
ENSXMAG00000018780	larp1	99	74.754	ENSELUG00000019403	larp1	98	76.498	Esox_lucius
ENSXMAG00000018780	larp1	96	62.343	ENSFCAG00000000592	LARP1	97	62.724	Felis_catus
ENSXMAG00000018780	larp1	76	72.156	ENSFALG00000008335	LARP1	95	72.188	Ficedula_albicollis
ENSXMAG00000018780	larp1	84	68.520	ENSFDAG00000021125	LARP1	96	68.101	Fukomys_damarensis
ENSXMAG00000018780	larp1	63	77.086	ENSFHEG00000020307	larp1	97	78.359	Fundulus_heteroclitus
ENSXMAG00000018780	larp1	99	66.148	ENSGALG00000040109	LARP1	97	67.573	Gallus_gallus
ENSXMAG00000018780	larp1	99	66.039	ENSGAGG00000025113	LARP1	96	72.018	Gopherus_agassizii
ENSXMAG00000018780	larp1	86	67.079	ENSGGOG00000006048	LARP1	91	66.873	Gorilla_gorilla
ENSXMAG00000018780	larp1	100	83.498	ENSHBUG00000020762	larp1	99	86.108	Haplochromis_burtoni
ENSXMAG00000018780	larp1	99	62.267	ENSHGLG00000006267	LARP1	97	63.645	Heterocephalus_glaber_female
ENSXMAG00000018780	larp1	88	57.375	ENSHGLG00100003395	-	88	56.282	Heterocephalus_glaber_male
ENSXMAG00000018780	larp1	87	66.768	ENSHGLG00100014230	-	96	67.820	Heterocephalus_glaber_male
ENSXMAG00000018780	larp1	87	92.481	ENSHCOG00000010786	larp1	96	94.118	Hippocampus_comes
ENSXMAG00000018780	larp1	89	72.541	ENSIPUG00000019105	Larp1	95	73.361	Ictalurus_punctatus
ENSXMAG00000018780	larp1	84	65.897	ENSSTOG00000005678	LARP1	95	65.792	Ictidomys_tridecemlineatus
ENSXMAG00000018780	larp1	96	60.685	ENSJJAG00000016950	Larp1	97	60.000	Jaculus_jaculus
ENSXMAG00000018780	larp1	100	85.158	ENSKMAG00000018468	larp1	99	87.922	Kryptolebias_marmoratus
ENSXMAG00000018780	larp1	99	81.000	ENSLBEG00000027172	larp1	100	80.304	Labrus_bergylta
ENSXMAG00000018780	larp1	94	73.837	ENSLOCG00000012457	larp1	99	74.081	Lepisosteus_oculatus
ENSXMAG00000018780	larp1	98	61.725	ENSLAFG00000008991	LARP1	97	62.672	Loxodonta_africana
ENSXMAG00000018780	larp1	85	67.681	ENSMFAG00000031651	LARP1	90	67.576	Macaca_fascicularis
ENSXMAG00000018780	larp1	84	65.053	ENSMMUG00000009411	LARP1	96	65.158	Macaca_mulatta
ENSXMAG00000018780	larp1	77	70.323	ENSMNEG00000039294	LARP1	95	70.208	Macaca_nemestrina
ENSXMAG00000018780	larp1	85	67.786	ENSMLEG00000035142	LARP1	90	67.681	Mandrillus_leucophaeus
ENSXMAG00000018780	larp1	100	82.023	ENSMAMG00000021788	larp1	100	82.204	Mastacembelus_armatus
ENSXMAG00000018780	larp1	100	82.946	ENSMZEG00005009345	larp1	99	85.569	Maylandia_zebra
ENSXMAG00000018780	larp1	88	69.057	ENSMGAG00000005696	LARP1	96	68.388	Meleagris_gallopavo
ENSXMAG00000018780	larp1	99	63.153	ENSMAUG00000001385	Larp1	97	64.091	Mesocricetus_auratus
ENSXMAG00000018780	larp1	85	67.118	ENSMICG00000000837	LARP1	95	70.968	Microcebus_murinus
ENSXMAG00000018780	larp1	99	63.508	ENSMOCG00000008920	Larp1	97	64.364	Microtus_ochrogaster
ENSXMAG00000018780	larp1	94	60.504	ENSMMOG00000013364	larp1	99	61.905	Mola_mola
ENSXMAG00000018780	larp1	87	67.312	ENSMODG00000008663	LARP1	96	68.234	Monodelphis_domestica
ENSXMAG00000018780	larp1	100	84.076	ENSMALG00000017180	larp1	100	83.712	Monopterus_albus
ENSXMAG00000018780	larp1	99	63.824	MGP_CAROLIEiJ_G0016383	Larp1	97	64.455	Mus_caroli
ENSXMAG00000018780	larp1	99	63.914	ENSMUSG00000037331	Larp1	97	64.545	Mus_musculus
ENSXMAG00000018780	larp1	99	63.408	MGP_PahariEiJ_G0017518	Larp1	97	64.240	Mus_pahari
ENSXMAG00000018780	larp1	99	63.914	MGP_SPRETEiJ_G0017225	Larp1	97	64.545	Mus_spretus
ENSXMAG00000018780	larp1	82	59.789	ENSMPUG00000013564	LARP1	99	59.474	Mustela_putorius_furo
ENSXMAG00000018780	larp1	87	63.516	ENSMLUG00000002608	LARP1	97	64.241	Myotis_lucifugus
ENSXMAG00000018780	larp1	86	65.517	ENSNGAG00000001098	Larp1	95	65.409	Nannospalax_galili
ENSXMAG00000018780	larp1	90	83.066	ENSNBRG00000008963	larp1	98	83.267	Neolamprologus_brichardi
ENSXMAG00000018780	larp1	85	66.702	ENSNLEG00000016588	LARP1	96	65.491	Nomascus_leucogenys
ENSXMAG00000018780	larp1	87	63.147	ENSMEUG00000002957	LARP1	96	63.936	Notamacropus_eugenii
ENSXMAG00000018780	larp1	84	68.239	ENSOPRG00000013014	LARP1	96	67.958	Ochotona_princeps
ENSXMAG00000018780	larp1	85	68.025	ENSODEG00000010824	LARP1	96	67.820	Octodon_degus
ENSXMAG00000018780	larp1	99	80.036	ENSONIG00000017308	larp1	97	81.935	Oreochromis_niloticus
ENSXMAG00000018780	larp1	89	68.236	ENSOANG00000005096	LARP1	95	70.514	Ornithorhynchus_anatinus
ENSXMAG00000018780	larp1	97	63.587	ENSOCUG00000013066	LARP1	97	64.077	Oryctolagus_cuniculus
ENSXMAG00000018780	larp1	100	81.159	ENSORLG00000000824	larp1	100	81.069	Oryzias_latipes
ENSXMAG00000018780	larp1	100	81.488	ENSORLG00020022241	larp1	100	81.307	Oryzias_latipes_hni
ENSXMAG00000018780	larp1	100	80.273	ENSORLG00015007538	larp1	100	81.364	Oryzias_latipes_hsok
ENSXMAG00000018780	larp1	100	80.654	ENSOMEG00000003134	larp1	100	81.488	Oryzias_melastigma
ENSXMAG00000018780	larp1	87	66.802	ENSOGAG00000016750	LARP1	96	68.029	Otolemur_garnettii
ENSXMAG00000018780	larp1	85	66.667	ENSOARG00000009893	LARP1	97	66.180	Ovis_aries
ENSXMAG00000018780	larp1	85	67.857	ENSPPAG00000042993	LARP1	90	67.647	Pan_paniscus
ENSXMAG00000018780	larp1	85	66.424	ENSPPRG00000009780	LARP1	91	65.798	Panthera_pardus
ENSXMAG00000018780	larp1	85	66.632	ENSPTIG00000007013	LARP1	91	66.319	Panthera_tigris_altaica
ENSXMAG00000018780	larp1	96	60.740	ENSPTRG00000017447	LARP1	97	61.293	Pan_troglodytes
ENSXMAG00000018780	larp1	96	60.685	ENSPANG00000008080	LARP1	97	61.510	Papio_anubis
ENSXMAG00000018780	larp1	98	65.082	ENSPKIG00000017153	-	99	65.488	Paramormyrops_kingsleyae
ENSXMAG00000018780	larp1	95	75.118	ENSPKIG00000010096	larp1	96	75.283	Paramormyrops_kingsleyae
ENSXMAG00000018780	larp1	94	76.260	ENSPMGG00000011599	larp1	97	76.841	Periophthalmus_magnuspinnatus
ENSXMAG00000018780	larp1	88	65.119	ENSPEMG00000022523	Larp1	96	65.690	Peromyscus_maniculatus_bairdii
ENSXMAG00000018780	larp1	96	64.351	ENSPCIG00000019242	LARP1	89	64.711	Phascolarctos_cinereus
ENSXMAG00000018780	larp1	100	97.715	ENSPFOG00000005836	larp1	100	97.715	Poecilia_formosa
ENSXMAG00000018780	larp1	100	97.623	ENSPLAG00000008936	larp1	100	97.623	Poecilia_latipinna
ENSXMAG00000018780	larp1	100	97.715	ENSPMEG00000013656	larp1	100	97.715	Poecilia_mexicana
ENSXMAG00000018780	larp1	89	97.317	ENSPREG00000005726	larp1	99	97.216	Poecilia_reticulata
ENSXMAG00000018780	larp1	84	65.969	ENSPCAG00000006407	LARP1	97	65.759	Procavia_capensis
ENSXMAG00000018780	larp1	84	62.893	ENSPCOG00000016949	LARP1	96	63.417	Propithecus_coquereli
ENSXMAG00000018780	larp1	96	62.814	ENSPVAG00000002262	LARP1	97	63.357	Pteropus_vampyrus
ENSXMAG00000018780	larp1	100	82.857	ENSPNYG00000007938	larp1	99	85.671	Pundamilia_nyererei
ENSXMAG00000018780	larp1	98	72.063	ENSPNAG00000021427	larp1	97	74.032	Pygocentrus_nattereri
ENSXMAG00000018780	larp1	87	64.264	ENSRNOG00000031544	Larp1	95	65.618	Rattus_norvegicus
ENSXMAG00000018780	larp1	85	67.786	ENSRBIG00000038005	LARP1	90	67.681	Rhinopithecus_bieti
ENSXMAG00000018780	larp1	85	67.786	ENSRROG00000034073	LARP1	95	70.323	Rhinopithecus_roxellana
ENSXMAG00000018780	larp1	85	67.537	ENSSBOG00000019816	LARP1	96	65.094	Saimiri_boliviensis_boliviensis
ENSXMAG00000018780	larp1	87	68.172	ENSSHAG00000011115	LARP1	96	69.231	Sarcophilus_harrisii
ENSXMAG00000018780	larp1	88	74.624	ENSSFOG00015020304	larp1	93	76.739	Scleropages_formosus
ENSXMAG00000018780	larp1	97	70.779	ENSSFOG00015018058	-	96	71.645	Scleropages_formosus
ENSXMAG00000018780	larp1	93	79.344	ENSSMAG00000007468	larp1	98	80.911	Scophthalmus_maximus
ENSXMAG00000018780	larp1	100	84.050	ENSSDUG00000000268	larp1	100	84.140	Seriola_dumerili
ENSXMAG00000018780	larp1	81	81.278	ENSSLDG00000016505	larp1	99	80.381	Seriola_lalandi_dorsalis
ENSXMAG00000018780	larp1	53	83.133	ENSSARG00000013907	-	83	83.200	Sorex_araneus
ENSXMAG00000018780	larp1	99	64.279	ENSSPUG00000012179	-	99	64.161	Sphenodon_punctatus
ENSXMAG00000018780	larp1	100	83.839	ENSSPAG00000003910	larp1	100	84.018	Stegastes_partitus
ENSXMAG00000018780	larp1	96	62.198	ENSSSCG00000017069	LARP1	96	69.511	Sus_scrofa
ENSXMAG00000018780	larp1	84	70.011	ENSTGUG00000000704	LARP1	100	69.684	Taeniopygia_guttata
ENSXMAG00000018780	larp1	99	80.216	ENSTRUG00000009470	larp1	99	80.126	Takifugu_rubripes
ENSXMAG00000018780	larp1	82	67.320	ENSTBEG00000003381	LARP1	99	65.142	Tupaia_belangeri
ENSXMAG00000018780	larp1	87	65.787	ENSTTRG00000015934	LARP1	97	67.503	Tursiops_truncatus
ENSXMAG00000018780	larp1	96	62.455	ENSUAMG00000019334	LARP1	97	62.333	Ursus_americanus
ENSXMAG00000018780	larp1	84	66.071	ENSUMAG00000002934	LARP1	96	67.553	Ursus_maritimus
ENSXMAG00000018780	larp1	77	71.001	ENSVVUG00000004644	LARP1	95	70.656	Vulpes_vulpes
ENSXMAG00000018780	larp1	96	67.011	ENSXETG00000008413	larp1	99	65.517	Xenopus_tropicalis
ENSXMAG00000018780	larp1	86	94.834	ENSXCOG00000004022	larp1	99	94.834	Xiphophorus_couchianus