EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018792 (Gene tree)
Gene ID: 102221157
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13220 bases
Position: chr16:648193-661412
Accession: 102221157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018881	IBN_N	PF03810.19	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000018909	-	2631	XM_005812474	ENSXMAP00000018881	876 (aa)	XP_005812531	M4AWN6

Gene Model

Click here to download ENSXMAG00000018792's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018792	kpnb1	100	92.123	ENSG00000108424	KPNB1	100	93.333	Homo_sapiens
ENSXMAG00000018792	kpnb1	100	98.402	ENSAPOG00000020572	kpnb1	100	98.402	Acanthochromis_polyacanthus
ENSXMAG00000018792	kpnb1	96	92.299	ENSAMEG00000004613	KPNB1	100	92.299	Ailuropoda_melanoleuca
ENSXMAG00000018792	kpnb1	98	98.014	ENSACIG00000023130	kpnb1	99	98.014	Amphilophus_citrinellus
ENSXMAG00000018792	kpnb1	100	98.402	ENSAOCG00000007048	kpnb1	100	98.402	Amphiprion_ocellaris
ENSXMAG00000018792	kpnb1	100	98.402	ENSAPEG00000008270	kpnb1	100	98.402	Amphiprion_percula
ENSXMAG00000018792	kpnb1	100	97.374	ENSATEG00000015139	kpnb1	100	97.374	Anabas_testudineus
ENSXMAG00000018792	kpnb1	96	92.071	ENSAPLG00000010177	KPNB1	96	92.071	Anas_platyrhynchos
ENSXMAG00000018792	kpnb1	100	92.694	ENSACAG00000007097	KPNB1	100	92.694	Anolis_carolinensis
ENSXMAG00000018792	kpnb1	100	89.384	ENSANAG00000024932	-	99	89.384	Aotus_nancymaae
ENSXMAG00000018792	kpnb1	100	97.717	ENSACLG00000015070	kpnb1	100	97.717	Astatotilapia_calliptera
ENSXMAG00000018792	kpnb1	100	96.233	ENSAMXG00000041903	kpnb1	100	96.233	Astyanax_mexicanus
ENSXMAG00000018792	kpnb1	100	92.466	ENSBTAG00000006586	KPNB1	100	92.466	Bos_taurus
ENSXMAG00000018792	kpnb1	99	48.123	WBGene00002075	imb-1	98	48.123	Caenorhabditis_elegans
ENSXMAG00000018792	kpnb1	100	92.237	ENSCJAG00000007834	KPNB1	100	92.237	Callithrix_jacchus
ENSXMAG00000018792	kpnb1	100	92.466	ENSCAFG00000016678	KPNB1	100	92.466	Canis_familiaris
ENSXMAG00000018792	kpnb1	100	92.466	ENSCAFG00020023205	KPNB1	100	92.466	Canis_lupus_dingo
ENSXMAG00000018792	kpnb1	100	92.466	ENSCHIG00000014896	KPNB1	100	92.466	Capra_hircus
ENSXMAG00000018792	kpnb1	100	90.525	ENSTSYG00000014472	KPNB1	99	90.525	Carlito_syrichta
ENSXMAG00000018792	kpnb1	96	92.527	ENSCAPG00000014185	KPNB1	100	92.527	Cavia_aperea
ENSXMAG00000018792	kpnb1	100	92.466	ENSCPOG00000006566	KPNB1	100	92.466	Cavia_porcellus
ENSXMAG00000018792	kpnb1	100	85.812	ENSCCAG00000029263	-	99	85.812	Cebus_capucinus
ENSXMAG00000018792	kpnb1	100	70.258	ENSCCAG00000018551	-	100	70.258	Cebus_capucinus
ENSXMAG00000018792	kpnb1	100	92.123	ENSCATG00000037124	KPNB1	100	92.123	Cercocebus_atys
ENSXMAG00000018792	kpnb1	100	92.352	ENSCLAG00000017091	KPNB1	100	92.352	Chinchilla_lanigera
ENSXMAG00000018792	kpnb1	100	92.123	ENSCSAG00000002605	KPNB1	100	92.123	Chlorocebus_sabaeus
ENSXMAG00000018792	kpnb1	73	81.132	ENSCHOG00000010604	KPNB1	73	81.132	Choloepus_hoffmanni
ENSXMAG00000018792	kpnb1	99	92.932	ENSCPBG00000027423	KPNB1	94	92.932	Chrysemys_picta_bellii
ENSXMAG00000018792	kpnb1	99	64.766	ENSCING00000004639	-	99	64.766	Ciona_intestinalis
ENSXMAG00000018792	kpnb1	100	62.147	ENSCSAVG00000008624	-	100	62.147	Ciona_savignyi
ENSXMAG00000018792	kpnb1	96	92.975	ENSCANG00000013489	KPNB1	100	92.975	Colobus_angolensis_palliatus
ENSXMAG00000018792	kpnb1	100	92.352	ENSCGRG00001016042	Kpnb1	100	92.352	Cricetulus_griseus_chok1gshd
ENSXMAG00000018792	kpnb1	96	92.408	ENSCGRG00000013910	Kpnb1	100	92.408	Cricetulus_griseus_crigri
ENSXMAG00000018792	kpnb1	97	94.131	ENSCSEG00000007991	kpnb1	100	94.131	Cynoglossus_semilaevis
ENSXMAG00000018792	kpnb1	100	95.662	ENSDARG00000104889	kpnb1	100	95.662	Danio_rerio
ENSXMAG00000018792	kpnb1	99	61.986	FBgn0262743	Fs(2)Ket	99	61.986	Drosophila_melanogaster
ENSXMAG00000018792	kpnb1	98	80.742	ENSEBUG00000013869	kpnb1	98	80.742	Eptatretus_burgeri
ENSXMAG00000018792	kpnb1	100	92.466	ENSEASG00005000805	KPNB1	100	92.466	Equus_asinus_asinus
ENSXMAG00000018792	kpnb1	100	92.466	ENSECAG00000014560	KPNB1	100	92.466	Equus_caballus
ENSXMAG00000018792	kpnb1	85	92.462	ENSEEUG00000005046	KPNB1	88	92.462	Erinaceus_europaeus
ENSXMAG00000018792	kpnb1	100	97.032	ENSELUG00000015847	kpnb1	100	97.032	Esox_lucius
ENSXMAG00000018792	kpnb1	100	92.466	ENSFCAG00000023994	KPNB1	100	92.466	Felis_catus
ENSXMAG00000018792	kpnb1	96	92.764	ENSFDAG00000019923	KPNB1	100	92.764	Fukomys_damarensis
ENSXMAG00000018792	kpnb1	100	99.429	ENSFHEG00000020199	kpnb1	100	99.429	Fundulus_heteroclitus
ENSXMAG00000018792	kpnb1	100	91.895	ENSGMOG00000011607	kpnb1	99	91.895	Gadus_morhua
ENSXMAG00000018792	kpnb1	100	92.352	ENSGALG00000036962	KPNB1	100	92.352	Gallus_gallus
ENSXMAG00000018792	kpnb1	100	99.886	ENSGAFG00000000783	kpnb1	100	99.886	Gambusia_affinis
ENSXMAG00000018792	kpnb1	100	92.768	ENSGACG00000014765	kpnb1	100	92.768	Gasterosteus_aculeatus
ENSXMAG00000018792	kpnb1	96	92.390	ENSGAGG00000023737	KPNB1	92	92.390	Gopherus_agassizii
ENSXMAG00000018792	kpnb1	100	92.123	ENSGGOG00000008089	KPNB1	100	92.123	Gorilla_gorilla
ENSXMAG00000018792	kpnb1	100	97.717	ENSHBUG00000016826	kpnb1	100	97.717	Haplochromis_burtoni
ENSXMAG00000018792	kpnb1	100	92.694	ENSHGLG00000014138	KPNB1	100	92.694	Heterocephalus_glaber_female
ENSXMAG00000018792	kpnb1	96	92.764	ENSHGLG00100006572	KPNB1	100	92.764	Heterocephalus_glaber_male
ENSXMAG00000018792	kpnb1	100	94.292	ENSHCOG00000002084	kpnb1	100	94.292	Hippocampus_comes
ENSXMAG00000018792	kpnb1	99	91.541	ENSIPUG00000012402	kpnb1	95	91.541	Ictalurus_punctatus
ENSXMAG00000018792	kpnb1	100	92.466	ENSSTOG00000007896	KPNB1	100	92.466	Ictidomys_tridecemlineatus
ENSXMAG00000018792	kpnb1	100	92.352	ENSJJAG00000010909	Kpnb1	100	92.352	Jaculus_jaculus
ENSXMAG00000018792	kpnb1	100	97.260	ENSKMAG00000001547	kpnb1	100	97.260	Kryptolebias_marmoratus
ENSXMAG00000018792	kpnb1	99	97.347	ENSLBEG00000025794	kpnb1	99	95.439	Labrus_bergylta
ENSXMAG00000018792	kpnb1	88	92.348	ENSLACG00000017620	KPNB1	99	92.348	Latimeria_chalumnae
ENSXMAG00000018792	kpnb1	100	96.461	ENSLOCG00000013753	kpnb1	100	96.461	Lepisosteus_oculatus
ENSXMAG00000018792	kpnb1	100	87.557	ENSLAFG00000001328	KPNB1	100	87.557	Loxodonta_africana
ENSXMAG00000018792	kpnb1	99	89.691	ENSMFAG00000030197	KPNB1	100	92.171	Macaca_fascicularis
ENSXMAG00000018792	kpnb1	99	90.629	ENSMMUG00000019760	KPNB1	99	90.629	Macaca_mulatta
ENSXMAG00000018792	kpnb1	100	92.123	ENSMNEG00000040927	KPNB1	100	92.123	Macaca_nemestrina
ENSXMAG00000018792	kpnb1	100	89.726	ENSMLEG00000038185	KPNB1	99	89.726	Mandrillus_leucophaeus
ENSXMAG00000018792	kpnb1	100	97.831	ENSMAMG00000011036	kpnb1	100	97.831	Mastacembelus_armatus
ENSXMAG00000018792	kpnb1	100	97.717	ENSMZEG00005004564	kpnb1	100	97.717	Maylandia_zebra
ENSXMAG00000018792	kpnb1	55	91.511	ENSMGAG00000002770	-	100	91.511	Meleagris_gallopavo
ENSXMAG00000018792	kpnb1	100	92.352	ENSMAUG00000006211	Kpnb1	100	92.352	Mesocricetus_auratus
ENSXMAG00000018792	kpnb1	100	92.466	ENSMICG00000012059	KPNB1	84	92.466	Microcebus_murinus
ENSXMAG00000018792	kpnb1	100	92.352	ENSMOCG00000003683	Kpnb1	100	92.352	Microtus_ochrogaster
ENSXMAG00000018792	kpnb1	100	92.922	ENSMODG00000012505	KPNB1	100	92.922	Monodelphis_domestica
ENSXMAG00000018792	kpnb1	100	97.831	ENSMALG00000000863	kpnb1	100	97.831	Monopterus_albus
ENSXMAG00000018792	kpnb1	94	93.066	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.066	Mus_caroli
ENSXMAG00000018792	kpnb1	100	92.352	ENSMUSG00000001440	Kpnb1	100	92.352	Mus_musculus
ENSXMAG00000018792	kpnb1	100	91.448	ENSMPUG00000015220	KPNB1	100	91.448	Mustela_putorius_furo
ENSXMAG00000018792	kpnb1	100	87.585	ENSMLUG00000014522	KPNB1	100	87.585	Myotis_lucifugus
ENSXMAG00000018792	kpnb1	96	92.408	ENSNGAG00000017610	Kpnb1	100	92.408	Nannospalax_galili
ENSXMAG00000018792	kpnb1	100	97.717	ENSNBRG00000019305	kpnb1	100	97.717	Neolamprologus_brichardi
ENSXMAG00000018792	kpnb1	100	92.123	ENSNLEG00000001446	KPNB1	100	92.123	Nomascus_leucogenys
ENSXMAG00000018792	kpnb1	100	87.329	ENSMEUG00000014284	KPNB1	100	87.329	Notamacropus_eugenii
ENSXMAG00000018792	kpnb1	100	92.352	ENSODEG00000017287	KPNB1	100	92.352	Octodon_degus
ENSXMAG00000018792	kpnb1	100	97.831	ENSONIG00000009269	kpnb1	100	97.831	Oreochromis_niloticus
ENSXMAG00000018792	kpnb1	100	92.466	ENSOCUG00000015425	KPNB1	100	92.466	Oryctolagus_cuniculus
ENSXMAG00000018792	kpnb1	100	97.603	ENSORLG00000019936	kpnb1	100	97.603	Oryzias_latipes
ENSXMAG00000018792	kpnb1	100	97.603	ENSORLG00020021181	kpnb1	100	97.603	Oryzias_latipes_hni
ENSXMAG00000018792	kpnb1	100	97.489	ENSORLG00015012177	kpnb1	100	97.489	Oryzias_latipes_hsok
ENSXMAG00000018792	kpnb1	100	97.717	ENSOMEG00000021022	kpnb1	100	97.717	Oryzias_melastigma
ENSXMAG00000018792	kpnb1	100	92.352	ENSOGAG00000006153	KPNB1	100	92.352	Otolemur_garnettii
ENSXMAG00000018792	kpnb1	97	91.686	ENSOARG00000008469	KPNB1	99	91.686	Ovis_aries
ENSXMAG00000018792	kpnb1	100	92.123	ENSPPAG00000028842	KPNB1	100	92.123	Pan_paniscus
ENSXMAG00000018792	kpnb1	97	92.208	ENSPPRG00000022879	KPNB1	97	92.208	Panthera_pardus
ENSXMAG00000018792	kpnb1	97	92.208	ENSPTIG00000006870	KPNB1	97	92.208	Panthera_tigris_altaica
ENSXMAG00000018792	kpnb1	100	92.123	ENSPTRG00000009333	KPNB1	100	92.123	Pan_troglodytes
ENSXMAG00000018792	kpnb1	100	92.123	ENSPANG00000022099	KPNB1	100	92.123	Papio_anubis
ENSXMAG00000018792	kpnb1	100	95.890	ENSPKIG00000017563	kpnb1	100	95.890	Paramormyrops_kingsleyae
ENSXMAG00000018792	kpnb1	96	93.001	ENSPSIG00000009775	KPNB1	100	93.001	Pelodiscus_sinensis
ENSXMAG00000018792	kpnb1	100	89.624	ENSPMGG00000001041	kpnb1	93	89.624	Periophthalmus_magnuspinnatus
ENSXMAG00000018792	kpnb1	100	92.352	ENSPEMG00000017783	Kpnb1	100	92.352	Peromyscus_maniculatus_bairdii
ENSXMAG00000018792	kpnb1	99	84.738	ENSPMAG00000007117	kpnb1	99	84.738	Petromyzon_marinus
ENSXMAG00000018792	kpnb1	100	92.922	ENSPCIG00000001034	KPNB1	100	92.922	Phascolarctos_cinereus
ENSXMAG00000018792	kpnb1	100	99.886	ENSPFOG00000009014	kpnb1	100	99.886	Poecilia_formosa
ENSXMAG00000018792	kpnb1	100	99.886	ENSPLAG00000010922	kpnb1	100	99.886	Poecilia_latipinna
ENSXMAG00000018792	kpnb1	100	99.886	ENSPREG00000012268	kpnb1	100	99.886	Poecilia_reticulata
ENSXMAG00000018792	kpnb1	100	91.667	ENSPPYG00000025935	KPNB1	100	91.667	Pongo_abelii
ENSXMAG00000018792	kpnb1	75	78.667	ENSPCAG00000002526	KPNB1	78	78.667	Procavia_capensis
ENSXMAG00000018792	kpnb1	100	92.466	ENSPCOG00000026259	KPNB1	100	92.466	Propithecus_coquereli
ENSXMAG00000018792	kpnb1	100	92.009	ENSPVAG00000004910	KPNB1	100	92.009	Pteropus_vampyrus
ENSXMAG00000018792	kpnb1	100	93.341	ENSPNYG00000017703	kpnb1	96	97.832	Pundamilia_nyererei
ENSXMAG00000018792	kpnb1	99	88.506	ENSPNAG00000024047	kpnb1	98	88.506	Pygocentrus_nattereri
ENSXMAG00000018792	kpnb1	100	92.352	ENSRNOG00000009275	Kpnb1	100	92.352	Rattus_norvegicus
ENSXMAG00000018792	kpnb1	100	92.009	ENSRBIG00000002254	KPNB1	99	92.009	Rhinopithecus_bieti
ENSXMAG00000018792	kpnb1	99	91.570	ENSRROG00000030419	KPNB1	99	91.570	Rhinopithecus_roxellana
ENSXMAG00000018792	kpnb1	99	34.130	YLR347C	KAP95	99	34.130	Saccharomyces_cerevisiae
ENSXMAG00000018792	kpnb1	100	92.123	ENSSBOG00000030025	KPNB1	94	92.123	Saimiri_boliviensis_boliviensis
ENSXMAG00000018792	kpnb1	96	92.680	ENSSHAG00000018214	KPNB1	100	92.680	Sarcophilus_harrisii
ENSXMAG00000018792	kpnb1	100	96.918	ENSSFOG00015020000	kpnb1	100	96.918	Scleropages_formosus
ENSXMAG00000018792	kpnb1	100	98.059	ENSSDUG00000016218	kpnb1	100	98.059	Seriola_dumerili
ENSXMAG00000018792	kpnb1	98	98.019	ENSSLDG00000021549	kpnb1	97	98.019	Seriola_lalandi_dorsalis
ENSXMAG00000018792	kpnb1	100	92.352	ENSSPUG00000017799	KPNB1	100	92.352	Sphenodon_punctatus
ENSXMAG00000018792	kpnb1	100	97.945	ENSSPAG00000019346	kpnb1	100	97.945	Stegastes_partitus
ENSXMAG00000018792	kpnb1	100	92.466	ENSSSCG00000017514	KPNB1	100	92.466	Sus_scrofa
ENSXMAG00000018792	kpnb1	96	87.426	ENSTGUG00000003387	KPNB1	100	87.426	Taeniopygia_guttata
ENSXMAG00000018792	kpnb1	100	94.863	ENSTRUG00000000542	kpnb1	100	94.863	Takifugu_rubripes
ENSXMAG00000018792	kpnb1	100	95.434	ENSTNIG00000006494	kpnb1	100	95.434	Tetraodon_nigroviridis
ENSXMAG00000018792	kpnb1	96	92.645	ENSTTRG00000004682	KPNB1	100	92.645	Tursiops_truncatus
ENSXMAG00000018792	kpnb1	100	92.466	ENSUAMG00000025344	KPNB1	99	92.466	Ursus_americanus
ENSXMAG00000018792	kpnb1	98	91.279	ENSUMAG00000016471	KPNB1	98	91.279	Ursus_maritimus
ENSXMAG00000018792	kpnb1	100	78.767	ENSVPAG00000003675	KPNB1	100	78.767	Vicugna_pacos
ENSXMAG00000018792	kpnb1	100	92.466	ENSVVUG00000003085	KPNB1	100	92.466	Vulpes_vulpes
ENSXMAG00000018792	kpnb1	100	91.781	ENSXETG00000014717	kpnb1	100	91.781	Xenopus_tropicalis