EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018818 (Gene tree)
Gene ID: 102233380
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7813 bases
Position: chr16:1787960-1795772
Accession: 102233380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000018855	tRNA_int_end_N2	PF12928.7	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037411	-	1826	-	ENSXMAP00000024777	389 (aa)	-	-
ENSXMAT00000018883	-	1644	XM_005816548	ENSXMAP00000018855	496 (aa)	XP_005816605	M4AWL0

Gene Model

Click here to download ENSXMAG00000018818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018818	tsen54	99	46.704	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSXMAG00000018818	tsen54	100	71.513	ENSAPOG00000009659	tsen54	100	70.000	Acanthochromis_polyacanthus
ENSXMAG00000018818	tsen54	95	46.771	ENSAMEG00000009414	TSEN54	96	47.554	Ailuropoda_melanoleuca
ENSXMAG00000018818	tsen54	100	72.016	ENSAOCG00000000152	tsen54	98	72.016	Amphiprion_ocellaris
ENSXMAG00000018818	tsen54	100	71.624	ENSAPEG00000018931	tsen54	98	71.624	Amphiprion_percula
ENSXMAG00000018818	tsen54	100	66.981	ENSATEG00000019860	tsen54	100	67.736	Anabas_testudineus
ENSXMAG00000018818	tsen54	85	47.033	ENSAPLG00000009419	TSEN54	99	46.813	Anas_platyrhynchos
ENSXMAG00000018818	tsen54	99	47.901	ENSACAG00000006714	TSEN54	99	48.092	Anolis_carolinensis
ENSXMAG00000018818	tsen54	96	47.961	ENSANAG00000024061	TSEN54	96	47.379	Aotus_nancymaae
ENSXMAG00000018818	tsen54	100	68.945	ENSACLG00000019800	tsen54	100	68.945	Astatotilapia_calliptera
ENSXMAG00000018818	tsen54	97	58.586	ENSAMXG00000006546	tsen54	97	58.586	Astyanax_mexicanus
ENSXMAG00000018818	tsen54	96	47.573	ENSBTAG00000000824	TSEN54	97	48.544	Bos_taurus
ENSXMAG00000018818	tsen54	96	47.379	ENSCJAG00000014278	TSEN54	96	47.297	Callithrix_jacchus
ENSXMAG00000018818	tsen54	96	47.776	ENSCAFG00000004798	TSEN54	97	48.743	Canis_familiaris
ENSXMAG00000018818	tsen54	96	47.776	ENSCAFG00020000312	TSEN54	97	48.743	Canis_lupus_dingo
ENSXMAG00000018818	tsen54	96	48.235	ENSCHIG00000019908	TSEN54	97	48.431	Capra_hircus
ENSXMAG00000018818	tsen54	85	45.633	ENSTSYG00000037439	TSEN54	99	46.711	Carlito_syrichta
ENSXMAG00000018818	tsen54	96	48.456	ENSCCAG00000036624	TSEN54	96	47.297	Cebus_capucinus
ENSXMAG00000018818	tsen54	96	48.069	ENSCATG00000042877	TSEN54	96	47.961	Cercocebus_atys
ENSXMAG00000018818	tsen54	96	47.784	ENSCLAG00000002924	TSEN54	96	47.399	Chinchilla_lanigera
ENSXMAG00000018818	tsen54	99	46.516	ENSCSAG00000004809	TSEN54	99	46.328	Chlorocebus_sabaeus
ENSXMAG00000018818	tsen54	97	48.184	ENSCPBG00000028071	TSEN54	98	47.610	Chrysemys_picta_bellii
ENSXMAG00000018818	tsen54	99	46.816	ENSCANG00000028053	TSEN54	99	46.704	Colobus_angolensis_palliatus
ENSXMAG00000018818	tsen54	99	46.038	ENSCGRG00001020029	Tsen54	99	46.038	Cricetulus_griseus_chok1gshd
ENSXMAG00000018818	tsen54	83	45.190	ENSCGRG00000016289	Tsen54	99	45.190	Cricetulus_griseus_crigri
ENSXMAG00000018818	tsen54	80	56.039	ENSCSEG00000020586	tsen54	99	56.039	Cynoglossus_semilaevis
ENSXMAG00000018818	tsen54	80	56.716	ENSDARG00000036844	tsen54	100	56.965	Danio_rerio
ENSXMAG00000018818	tsen54	99	45.472	ENSDNOG00000018452	TSEN54	99	46.269	Dasypus_novemcinctus
ENSXMAG00000018818	tsen54	96	48.235	ENSDORG00000004073	Tsen54	97	47.297	Dipodomys_ordii
ENSXMAG00000018818	tsen54	95	33.397	ENSEBUG00000005203	TSEN54	94	33.397	Eptatretus_burgeri
ENSXMAG00000018818	tsen54	96	48.649	ENSEASG00005000579	TSEN54	97	48.456	Equus_asinus_asinus
ENSXMAG00000018818	tsen54	96	48.276	ENSECAG00000004924	TSEN54	97	48.084	Equus_caballus
ENSXMAG00000018818	tsen54	85	45.633	ENSEEUG00000008467	TSEN54	99	46.507	Erinaceus_europaeus
ENSXMAG00000018818	tsen54	99	58.640	ENSELUG00000017703	tsen54	92	58.824	Esox_lucius
ENSXMAG00000018818	tsen54	96	47.471	ENSFCAG00000023712	TSEN54	97	48.743	Felis_catus
ENSXMAG00000018818	tsen54	93	48.354	ENSFALG00000001119	TSEN54	92	47.737	Ficedula_albicollis
ENSXMAG00000018818	tsen54	85	45.852	ENSFDAG00000019090	TSEN54	99	45.852	Fukomys_damarensis
ENSXMAG00000018818	tsen54	100	82.213	ENSFHEG00000005470	tsen54	100	82.213	Fundulus_heteroclitus
ENSXMAG00000018818	tsen54	84	59.896	ENSGMOG00000013146	tsen54	99	59.896	Gadus_morhua
ENSXMAG00000018818	tsen54	96	43.836	ENSGALG00000047163	TSEN54	99	43.640	Gallus_gallus
ENSXMAG00000018818	tsen54	100	94.758	ENSGAFG00000005111	tsen54	100	94.758	Gambusia_affinis
ENSXMAG00000018818	tsen54	96	64.898	ENSGACG00000014987	tsen54	100	64.694	Gasterosteus_aculeatus
ENSXMAG00000018818	tsen54	97	47.876	ENSGAGG00000006825	TSEN54	99	47.114	Gopherus_agassizii
ENSXMAG00000018818	tsen54	95	47.451	ENSGGOG00000009417	TSEN54	99	47.255	Gorilla_gorilla
ENSXMAG00000018818	tsen54	90	67.965	ENSHBUG00000018296	tsen54	92	67.965	Haplochromis_burtoni
ENSXMAG00000018818	tsen54	96	47.784	ENSHGLG00000007979	TSEN54	97	47.399	Heterocephalus_glaber_female
ENSXMAG00000018818	tsen54	96	46.821	ENSHGLG00100005497	TSEN54	97	46.435	Heterocephalus_glaber_male
ENSXMAG00000018818	tsen54	80	64.951	ENSHCOG00000007481	tsen54	100	65.441	Hippocampus_comes
ENSXMAG00000018818	tsen54	98	52.277	ENSIPUG00000000590	tsen54	97	52.079	Ictalurus_punctatus
ENSXMAG00000018818	tsen54	96	46.809	ENSSTOG00000012883	TSEN54	97	46.809	Ictidomys_tridecemlineatus
ENSXMAG00000018818	tsen54	99	46.286	ENSJJAG00000007365	Tsen54	99	46.095	Jaculus_jaculus
ENSXMAG00000018818	tsen54	100	70.644	ENSKMAG00000006944	tsen54	100	70.455	Kryptolebias_marmoratus
ENSXMAG00000018818	tsen54	100	65.000	ENSLBEG00000004199	tsen54	100	65.385	Labrus_bergylta
ENSXMAG00000018818	tsen54	96	42.166	ENSLACG00000009497	TSEN54	99	42.166	Latimeria_chalumnae
ENSXMAG00000018818	tsen54	97	55.792	ENSLOCG00000011191	tsen54	97	55.985	Lepisosteus_oculatus
ENSXMAG00000018818	tsen54	92	47.023	ENSLAFG00000011655	TSEN54	92	47.228	Loxodonta_africana
ENSXMAG00000018818	tsen54	99	46.516	ENSMFAG00000000712	TSEN54	99	46.328	Macaca_fascicularis
ENSXMAG00000018818	tsen54	99	46.516	ENSMNEG00000029199	TSEN54	99	46.328	Macaca_nemestrina
ENSXMAG00000018818	tsen54	85	46.389	ENSMLEG00000044168	TSEN54	88	46.171	Mandrillus_leucophaeus
ENSXMAG00000018818	tsen54	100	70.588	ENSMAMG00000019773	tsen54	100	70.588	Mastacembelus_armatus
ENSXMAG00000018818	tsen54	100	68.750	ENSMZEG00005000884	tsen54	100	68.750	Maylandia_zebra
ENSXMAG00000018818	tsen54	92	43.725	ENSMGAG00000009556	TSEN54	92	44.534	Meleagris_gallopavo
ENSXMAG00000018818	tsen54	99	47.092	ENSMAUG00000016838	Tsen54	99	47.092	Mesocricetus_auratus
ENSXMAG00000018818	tsen54	96	48.600	ENSMICG00000044012	TSEN54	96	49.900	Microcebus_murinus
ENSXMAG00000018818	tsen54	99	47.719	ENSMOCG00000021585	Tsen54	99	47.719	Microtus_ochrogaster
ENSXMAG00000018818	tsen54	96	63.655	ENSMMOG00000020189	tsen54	99	64.476	Mola_mola
ENSXMAG00000018818	tsen54	96	46.125	ENSMODG00000007438	TSEN54	95	46.125	Monodelphis_domestica
ENSXMAG00000018818	tsen54	99	68.330	ENSMALG00000020573	tsen54	99	68.462	Monopterus_albus
ENSXMAG00000018818	tsen54	99	45.802	MGP_CAROLIEiJ_G0017417	Tsen54	99	45.802	Mus_caroli
ENSXMAG00000018818	tsen54	99	46.067	ENSMUSG00000020781	Tsen54	99	46.067	Mus_musculus
ENSXMAG00000018818	tsen54	99	46.565	MGP_PahariEiJ_G0018547	Tsen54	99	46.183	Mus_pahari
ENSXMAG00000018818	tsen54	99	46.067	MGP_SPRETEiJ_G0018262	Tsen54	99	46.067	Mus_spretus
ENSXMAG00000018818	tsen54	99	44.195	ENSMPUG00000013870	TSEN54	99	45.318	Mustela_putorius_furo
ENSXMAG00000018818	tsen54	96	47.485	ENSMLUG00000015298	TSEN54	96	48.193	Myotis_lucifugus
ENSXMAG00000018818	tsen54	96	48.810	ENSNGAG00000015673	Tsen54	97	48.810	Nannospalax_galili
ENSXMAG00000018818	tsen54	88	41.189	ENSMEUG00000011908	TSEN54	99	41.525	Notamacropus_eugenii
ENSXMAG00000018818	tsen54	96	44.334	ENSOPRG00000012513	TSEN54	96	44.135	Ochotona_princeps
ENSXMAG00000018818	tsen54	100	68.226	ENSONIG00000009543	tsen54	100	68.226	Oreochromis_niloticus
ENSXMAG00000018818	tsen54	99	43.585	ENSOCUG00000009875	TSEN54	99	43.843	Oryctolagus_cuniculus
ENSXMAG00000018818	tsen54	100	67.335	ENSORLG00000000852	tsen54	100	67.335	Oryzias_latipes
ENSXMAG00000018818	tsen54	100	67.535	ENSORLG00020018221	tsen54	100	67.535	Oryzias_latipes_hni
ENSXMAG00000018818	tsen54	98	68.098	ENSORLG00015009413	tsen54	99	68.098	Oryzias_latipes_hsok
ENSXMAG00000018818	tsen54	100	69.138	ENSOMEG00000014402	tsen54	97	69.138	Oryzias_melastigma
ENSXMAG00000018818	tsen54	96	46.863	ENSOGAG00000001442	TSEN54	97	46.667	Otolemur_garnettii
ENSXMAG00000018818	tsen54	85	45.295	ENSOARG00000010361	TSEN54	99	45.733	Ovis_aries
ENSXMAG00000018818	tsen54	94	46.906	ENSPPAG00000043519	TSEN54	99	48.119	Pan_paniscus
ENSXMAG00000018818	tsen54	96	47.665	ENSPPRG00000009162	TSEN54	97	48.936	Panthera_pardus
ENSXMAG00000018818	tsen54	85	46.444	ENSPTIG00000019312	TSEN54	96	47.241	Panthera_tigris_altaica
ENSXMAG00000018818	tsen54	99	46.516	ENSPTRG00000009646	TSEN54	99	46.328	Pan_troglodytes
ENSXMAG00000018818	tsen54	96	47.573	ENSPANG00000020133	TSEN54	99	46.529	Papio_anubis
ENSXMAG00000018818	tsen54	99	53.846	ENSPKIG00000023018	tsen54	99	53.957	Paramormyrops_kingsleyae
ENSXMAG00000018818	tsen54	80	43.936	ENSPSIG00000012807	TSEN54	100	43.707	Pelodiscus_sinensis
ENSXMAG00000018818	tsen54	93	50.424	ENSPMGG00000019578	tsen54	100	50.212	Periophthalmus_magnuspinnatus
ENSXMAG00000018818	tsen54	99	45.124	ENSPEMG00000014857	Tsen54	99	45.318	Peromyscus_maniculatus_bairdii
ENSXMAG00000018818	tsen54	100	93.600	ENSPFOG00000022740	tsen54	100	93.600	Poecilia_formosa
ENSXMAG00000018818	tsen54	100	94.758	ENSPLAG00000014847	tsen54	100	94.758	Poecilia_latipinna
ENSXMAG00000018818	tsen54	100	94.960	ENSPMEG00000022876	tsen54	100	94.960	Poecilia_mexicana
ENSXMAG00000018818	tsen54	100	93.750	ENSPREG00000013090	tsen54	100	93.750	Poecilia_reticulata
ENSXMAG00000018818	tsen54	91	49.348	ENSPPYG00000008629	TSEN54	99	49.244	Pongo_abelii
ENSXMAG00000018818	tsen54	92	41.615	ENSPCAG00000002093	TSEN54	96	41.822	Procavia_capensis
ENSXMAG00000018818	tsen54	99	46.374	ENSPCOG00000027880	TSEN54	99	46.780	Propithecus_coquereli
ENSXMAG00000018818	tsen54	99	47.092	ENSPVAG00000008446	TSEN54	99	47.448	Pteropus_vampyrus
ENSXMAG00000018818	tsen54	93	68.247	ENSPNYG00000010217	tsen54	100	68.247	Pundamilia_nyererei
ENSXMAG00000018818	tsen54	97	57.087	ENSPNAG00000003770	tsen54	97	57.087	Pygocentrus_nattereri
ENSXMAG00000018818	tsen54	99	46.629	ENSRNOG00000004598	Tsen54	99	46.629	Rattus_norvegicus
ENSXMAG00000018818	tsen54	99	46.816	ENSRBIG00000043040	TSEN54	99	46.704	Rhinopithecus_bieti
ENSXMAG00000018818	tsen54	99	46.816	ENSRROG00000030797	TSEN54	99	46.704	Rhinopithecus_roxellana
ENSXMAG00000018818	tsen54	96	44.681	ENSSBOG00000013543	TSEN54	96	45.219	Saimiri_boliviensis_boliviensis
ENSXMAG00000018818	tsen54	96	45.455	ENSSHAG00000018127	TSEN54	96	45.455	Sarcophilus_harrisii
ENSXMAG00000018818	tsen54	80	54.762	ENSSFOG00015004093	tsen54	99	54.524	Scleropages_formosus
ENSXMAG00000018818	tsen54	97	66.667	ENSSMAG00000012449	tsen54	98	67.850	Scophthalmus_maximus
ENSXMAG00000018818	tsen54	100	71.538	ENSSDUG00000021506	tsen54	100	71.538	Seriola_dumerili
ENSXMAG00000018818	tsen54	100	71.346	ENSSLDG00000016303	tsen54	100	71.346	Seriola_lalandi_dorsalis
ENSXMAG00000018818	tsen54	79	44.104	ENSSPUG00000008988	TSEN54	96	43.868	Sphenodon_punctatus
ENSXMAG00000018818	tsen54	93	72.553	ENSSPAG00000008098	-	99	72.553	Stegastes_partitus
ENSXMAG00000018818	tsen54	80	66.502	ENSSPAG00000008047	tsen54	100	66.502	Stegastes_partitus
ENSXMAG00000018818	tsen54	96	46.718	ENSSSCG00000036852	TSEN54	97	47.674	Sus_scrofa
ENSXMAG00000018818	tsen54	85	46.889	ENSTGUG00000008548	TSEN54	99	46.222	Taeniopygia_guttata
ENSXMAG00000018818	tsen54	100	67.530	ENSTRUG00000004230	tsen54	100	67.131	Takifugu_rubripes
ENSXMAG00000018818	tsen54	96	66.397	ENSTNIG00000011281	tsen54	98	66.533	Tetraodon_nigroviridis
ENSXMAG00000018818	tsen54	85	45.336	ENSTTRG00000015828	TSEN54	99	45.553	Tursiops_truncatus
ENSXMAG00000018818	tsen54	80	45.012	ENSUAMG00000010045	TSEN54	99	44.780	Ursus_americanus
ENSXMAG00000018818	tsen54	82	44.719	ENSUMAG00000008979	TSEN54	99	45.618	Ursus_maritimus
ENSXMAG00000018818	tsen54	95	48.047	ENSVVUG00000011411	TSEN54	97	49.023	Vulpes_vulpes
ENSXMAG00000018818	tsen54	97	46.600	ENSXETG00000012532	tsen54	100	61.667	Xenopus_tropicalis
ENSXMAG00000018818	tsen54	97	87.734	ENSXCOG00000018245	tsen54	100	92.822	Xiphophorus_couchianus