EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000018972 (Gene tree)
Gene ID: 102226939
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8973 bases
Position: chr21:13643422-13652394
Accession: 102226939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019017	zf-RanBP	PF00641.18	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019045	-	2064	XM_014472840	ENSXMAP00000019017	687 (aa)	XP_014328326	M4AX22

Gene Model

Click here to download ENSXMAG00000018972's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04217	Necroptosis	KEGG
xma04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000018972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000018972	shrprbck1r	58	54.884	ENSAPOG00000023352	sharpin	95	54.884	Acanthochromis_polyacanthus
ENSXMAG00000018972	shrprbck1r	100	79.014	ENSAPOG00000022737	shrprbck1r	100	79.014	Acanthochromis_polyacanthus
ENSXMAG00000018972	shrprbck1r	100	76.545	ENSACIG00000002184	shrprbck1r	100	76.545	Amphilophus_citrinellus
ENSXMAG00000018972	shrprbck1r	58	54.378	ENSAOCG00000017464	sharpin	95	54.378	Amphiprion_ocellaris
ENSXMAG00000018972	shrprbck1r	100	79.102	ENSAOCG00000002890	shrprbck1r	100	79.102	Amphiprion_ocellaris
ENSXMAG00000018972	shrprbck1r	100	80.599	ENSAPEG00000023274	shrprbck1r	100	80.599	Amphiprion_percula
ENSXMAG00000018972	shrprbck1r	58	54.378	ENSAPEG00000004049	sharpin	95	54.378	Amphiprion_percula
ENSXMAG00000018972	shrprbck1r	59	55.787	ENSATEG00000007832	sharpin	88	55.787	Anabas_testudineus
ENSXMAG00000018972	shrprbck1r	100	78.398	ENSATEG00000014561	shrprbck1r	100	78.684	Anabas_testudineus
ENSXMAG00000018972	shrprbck1r	100	76.791	ENSACLG00000022609	shrprbck1r	100	77.507	Astatotilapia_calliptera
ENSXMAG00000018972	shrprbck1r	53	56.533	ENSAMXG00000006229	sharpin	97	56.533	Astyanax_mexicanus
ENSXMAG00000018972	shrprbck1r	100	66.894	ENSAMXG00000021016	shrprbck1r	100	67.123	Astyanax_mexicanus
ENSXMAG00000018972	shrprbck1r	100	71.875	ENSCSEG00000011306	shrprbck1r	100	72.159	Cynoglossus_semilaevis
ENSXMAG00000018972	shrprbck1r	58	51.142	ENSCVAG00000006586	sharpin	95	51.142	Cyprinodon_variegatus
ENSXMAG00000018972	shrprbck1r	100	86.620	ENSCVAG00000007250	shrprbck1r	100	86.620	Cyprinodon_variegatus
ENSXMAG00000018972	shrprbck1r	100	66.620	ENSDARG00000059871	shrprbck1r	100	66.759	Danio_rerio
ENSXMAG00000018972	shrprbck1r	53	51.554	ENSDARG00000076995	sharpin	94	51.554	Danio_rerio
ENSXMAG00000018972	shrprbck1r	100	69.510	ENSELUG00000016022	shrprbck1r	100	69.510	Esox_lucius
ENSXMAG00000018972	shrprbck1r	58	51.981	ENSFHEG00000013564	sharpin	94	51.981	Fundulus_heteroclitus
ENSXMAG00000018972	shrprbck1r	100	90.935	ENSGAFG00000009309	shrprbck1r	100	90.935	Gambusia_affinis
ENSXMAG00000018972	shrprbck1r	58	44.390	ENSGAFG00000021405	sharpin	95	44.390	Gambusia_affinis
ENSXMAG00000018972	shrprbck1r	77	78.748	ENSGACG00000002544	shrprbck1r	99	78.748	Gasterosteus_aculeatus
ENSXMAG00000018972	shrprbck1r	100	76.264	ENSHBUG00000021933	shrprbck1r	100	76.404	Haplochromis_burtoni
ENSXMAG00000018972	shrprbck1r	59	52.607	ENSHCOG00000018847	sharpin	81	52.844	Hippocampus_comes
ENSXMAG00000018972	shrprbck1r	96	65.507	ENSIPUG00000014247	shrprbck1r	100	63.674	Ictalurus_punctatus
ENSXMAG00000018972	shrprbck1r	53	55.497	ENSIPUG00000011951	sharpin	99	55.497	Ictalurus_punctatus
ENSXMAG00000018972	shrprbck1r	100	76.667	ENSKMAG00000015215	shrprbck1r	100	76.667	Kryptolebias_marmoratus
ENSXMAG00000018972	shrprbck1r	58	55.981	ENSKMAG00000015204	sharpin	76	55.981	Kryptolebias_marmoratus
ENSXMAG00000018972	shrprbck1r	100	77.075	ENSLBEG00000016876	shrprbck1r	100	77.637	Labrus_bergylta
ENSXMAG00000018972	shrprbck1r	59	53.226	ENSLBEG00000016624	sharpin	96	53.636	Labrus_bergylta
ENSXMAG00000018972	shrprbck1r	95	51.520	ENSLACG00000010948	-	97	51.520	Latimeria_chalumnae
ENSXMAG00000018972	shrprbck1r	100	66.111	ENSLOCG00000008910	shrprbck1r	100	66.111	Lepisosteus_oculatus
ENSXMAG00000018972	shrprbck1r	100	75.955	ENSMAMG00000022930	shrprbck1r	100	76.096	Mastacembelus_armatus
ENSXMAG00000018972	shrprbck1r	100	75.421	ENSMZEG00005021257	shrprbck1r	100	76.124	Maylandia_zebra
ENSXMAG00000018972	shrprbck1r	100	76.562	ENSMMOG00000003764	shrprbck1r	100	76.562	Mola_mola
ENSXMAG00000018972	shrprbck1r	95	77.500	ENSMALG00000008861	shrprbck1r	96	77.147	Monopterus_albus
ENSXMAG00000018972	shrprbck1r	100	76.090	ENSNBRG00000002270	shrprbck1r	100	76.793	Neolamprologus_brichardi
ENSXMAG00000018972	shrprbck1r	100	75.843	ENSONIG00000014401	shrprbck1r	100	76.545	Oreochromis_niloticus
ENSXMAG00000018972	shrprbck1r	53	52.736	ENSONIG00000009626	-	97	52.736	Oreochromis_niloticus
ENSXMAG00000018972	shrprbck1r	58	51.643	ENSORLG00000017281	sharpin	95	51.643	Oryzias_latipes
ENSXMAG00000018972	shrprbck1r	100	75.387	ENSORLG00000007392	shrprbck1r	100	75.387	Oryzias_latipes
ENSXMAG00000018972	shrprbck1r	100	74.965	ENSORLG00020018619	shrprbck1r	100	74.965	Oryzias_latipes_hni
ENSXMAG00000018972	shrprbck1r	61	51.570	ENSORLG00020000801	sharpin	98	51.570	Oryzias_latipes_hni
ENSXMAG00000018972	shrprbck1r	58	52.204	ENSORLG00015009860	sharpin	95	52.204	Oryzias_latipes_hsok
ENSXMAG00000018972	shrprbck1r	100	74.262	ENSORLG00015018865	shrprbck1r	100	74.262	Oryzias_latipes_hsok
ENSXMAG00000018972	shrprbck1r	100	75.915	ENSOMEG00000012749	shrprbck1r	100	75.915	Oryzias_melastigma
ENSXMAG00000018972	shrprbck1r	58	43.659	ENSOMEG00000005729	sharpin	89	43.659	Oryzias_melastigma
ENSXMAG00000018972	shrprbck1r	64	57.143	ENSPKIG00000018308	-	95	57.143	Paramormyrops_kingsleyae
ENSXMAG00000018972	shrprbck1r	100	67.364	ENSPKIG00000006933	shrprbck1r	100	67.643	Paramormyrops_kingsleyae
ENSXMAG00000018972	shrprbck1r	100	73.143	ENSPMGG00000013254	shrprbck1r	100	73.143	Periophthalmus_magnuspinnatus
ENSXMAG00000018972	shrprbck1r	100	92.210	ENSPFOG00000004214	shrprbck1r	100	92.210	Poecilia_formosa
ENSXMAG00000018972	shrprbck1r	58	50.909	ENSPFOG00000015253	sharpin	95	50.909	Poecilia_formosa
ENSXMAG00000018972	shrprbck1r	100	92.068	ENSPLAG00000020523	shrprbck1r	100	92.068	Poecilia_latipinna
ENSXMAG00000018972	shrprbck1r	58	51.136	ENSPLAG00000000423	sharpin	95	51.136	Poecilia_latipinna
ENSXMAG00000018972	shrprbck1r	100	93.030	ENSPMEG00000006877	shrprbck1r	100	93.030	Poecilia_mexicana
ENSXMAG00000018972	shrprbck1r	100	92.561	ENSPREG00000014689	shrprbck1r	100	92.561	Poecilia_reticulata
ENSXMAG00000018972	shrprbck1r	58	50.801	ENSPREG00000009702	sharpin	95	50.801	Poecilia_reticulata
ENSXMAG00000018972	shrprbck1r	100	75.843	ENSPNYG00000022601	shrprbck1r	100	76.545	Pundamilia_nyererei
ENSXMAG00000018972	shrprbck1r	100	65.663	ENSPNAG00000007847	shrprbck1r	100	65.984	Pygocentrus_nattereri
ENSXMAG00000018972	shrprbck1r	53	55.405	ENSPNAG00000002911	sharpin	99	55.526	Pygocentrus_nattereri
ENSXMAG00000018972	shrprbck1r	77	63.327	ENSSFOG00015014150	-	96	63.327	Scleropages_formosus
ENSXMAG00000018972	shrprbck1r	59	62.411	ENSSFOG00015004028	sharpin	99	45.436	Scleropages_formosus
ENSXMAG00000018972	shrprbck1r	100	75.243	ENSSMAG00000018085	shrprbck1r	100	75.522	Scophthalmus_maximus
ENSXMAG00000018972	shrprbck1r	59	44.780	ENSSDUG00000019039	sharpin	96	44.780	Seriola_dumerili
ENSXMAG00000018972	shrprbck1r	100	78.592	ENSSDUG00000002959	shrprbck1r	100	78.873	Seriola_dumerili
ENSXMAG00000018972	shrprbck1r	100	78.310	ENSSLDG00000009026	shrprbck1r	100	78.592	Seriola_lalandi_dorsalis
ENSXMAG00000018972	shrprbck1r	96	78.235	ENSSPAG00000016097	shrprbck1r	99	78.235	Stegastes_partitus
ENSXMAG00000018972	shrprbck1r	100	74.392	ENSTRUG00000006949	shrprbck1r	100	75.107	Takifugu_rubripes
ENSXMAG00000018972	shrprbck1r	62	49.663	ENSTRUG00000011046	sharpin	96	52.257	Takifugu_rubripes
ENSXMAG00000018972	shrprbck1r	53	52.525	ENSTNIG00000008521	sharpin	94	52.525	Tetraodon_nigroviridis
ENSXMAG00000018972	shrprbck1r	58	42.647	ENSXCOG00000015019	sharpin	96	42.647	Xiphophorus_couchianus
ENSXMAG00000018972	shrprbck1r	100	99.418	ENSXCOG00000006701	shrprbck1r	100	99.418	Xiphophorus_couchianus
ENSXMAG00000018972	shrprbck1r	58	50.682	ENSXMAG00000022076	sharpin	95	50.682	Xiphophorus_maculatus