EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019192 (Gene tree)
Gene ID: 102216830
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 27942 bases
Position: chr19:11869483-11897424
Accession: 102216830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019247	RRM_1	PF00076.22	6.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019275	SCAF8-201	4363	XM_023352486	ENSXMAP00000019247	1380 (aa)	XP_023208254	M4AXQ2

Gene Model

Click here to download ENSXMAG00000019192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019192	SCAF8	78	68.681	ENSG00000213079	SCAF8	85	69.174	Homo_sapiens
ENSXMAG00000019192	SCAF8	100	80.962	ENSAPOG00000015527	SCAF8	100	80.750	Acanthochromis_polyacanthus
ENSXMAG00000019192	SCAF8	78	67.067	ENSAMEG00000007583	SCAF8	83	67.668	Ailuropoda_melanoleuca
ENSXMAG00000019192	SCAF8	100	80.352	ENSAOCG00000002421	SCAF8	100	80.311	Amphiprion_ocellaris
ENSXMAG00000019192	SCAF8	98	71.636	ENSAPEG00000020115	SCAF8	68	66.169	Amphiprion_percula
ENSXMAG00000019192	SCAF8	77	82.320	ENSATEG00000006959	SCAF8	95	82.179	Anabas_testudineus
ENSXMAG00000019192	SCAF8	78	76.445	ENSAPLG00000005765	SCAF8	87	67.145	Anas_platyrhynchos
ENSXMAG00000019192	SCAF8	78	68.681	ENSANAG00000036184	SCAF8	92	69.174	Aotus_nancymaae
ENSXMAG00000019192	SCAF8	100	77.415	ENSACLG00000018828	SCAF8	100	77.060	Astatotilapia_calliptera
ENSXMAG00000019192	SCAF8	78	68.673	ENSBTAG00000031917	SCAF8	86	69.287	Bos_taurus
ENSXMAG00000019192	SCAF8	78	68.765	ENSCJAG00000012631	SCAF8	83	67.509	Callithrix_jacchus
ENSXMAG00000019192	SCAF8	77	68.664	ENSCAFG00000000570	SCAF8	85	69.288	Canis_familiaris
ENSXMAG00000019192	SCAF8	77	68.664	ENSCAFG00020015048	SCAF8	84	69.288	Canis_lupus_dingo
ENSXMAG00000019192	SCAF8	78	68.673	ENSCHIG00000025041	SCAF8	86	69.287	Capra_hircus
ENSXMAG00000019192	SCAF8	78	66.707	ENSTSYG00000010991	SCAF8	91	66.947	Carlito_syrichta
ENSXMAG00000019192	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	69.231	Cavia_aperea
ENSXMAG00000019192	SCAF8	78	59.556	ENSCPOG00000030311	-	54	54.545	Cavia_porcellus
ENSXMAG00000019192	SCAF8	77	58.189	ENSCPOG00000022216	-	86	57.692	Cavia_porcellus
ENSXMAG00000019192	SCAF8	78	68.557	ENSCCAG00000024952	SCAF8	85	69.174	Cebus_capucinus
ENSXMAG00000019192	SCAF8	78	68.804	ENSCATG00000035361	SCAF8	85	69.174	Cercocebus_atys
ENSXMAG00000019192	SCAF8	78	67.159	ENSCLAG00000004910	SCAF8	86	67.995	Chinchilla_lanigera
ENSXMAG00000019192	SCAF8	78	67.067	ENSCSAG00000013430	SCAF8	86	67.428	Chlorocebus_sabaeus
ENSXMAG00000019192	SCAF8	75	72.360	ENSCPBG00000016330	SCAF8	81	69.592	Chrysemys_picta_bellii
ENSXMAG00000019192	SCAF8	78	68.804	ENSCANG00000039499	SCAF8	85	69.039	Colobus_angolensis_palliatus
ENSXMAG00000019192	SCAF8	78	67.059	ENSCGRG00001020167	Scaf8	93	67.176	Cricetulus_griseus_chok1gshd
ENSXMAG00000019192	SCAF8	77	66.825	ENSCGRG00000004120	Scaf8	92	66.944	Cricetulus_griseus_crigri
ENSXMAG00000019192	SCAF8	100	73.907	ENSCSEG00000000043	-	100	74.207	Cynoglossus_semilaevis
ENSXMAG00000019192	SCAF8	96	85.116	ENSCVAG00000000925	SCAF8	99	85.116	Cyprinodon_variegatus
ENSXMAG00000019192	SCAF8	74	65.385	ENSDNOG00000025271	SCAF8	87	65.385	Dasypus_novemcinctus
ENSXMAG00000019192	SCAF8	77	68.905	ENSDORG00000006391	Scaf8	86	69.030	Dipodomys_ordii
ENSXMAG00000019192	SCAF8	78	68.719	ENSEASG00005018879	SCAF8	86	69.335	Equus_asinus_asinus
ENSXMAG00000019192	SCAF8	78	68.927	ENSECAG00000005540	SCAF8	86	69.544	Equus_caballus
ENSXMAG00000019192	SCAF8	76	71.053	ENSELUG00000002779	SCAF8	100	61.340	Esox_lucius
ENSXMAG00000019192	SCAF8	78	70.200	ENSFCAG00000023424	SCAF8	85	70.324	Felis_catus
ENSXMAG00000019192	SCAF8	71	76.266	ENSFALG00000012433	SCAF8	85	68.272	Ficedula_albicollis
ENSXMAG00000019192	SCAF8	78	67.531	ENSFDAG00000010335	SCAF8	91	68.025	Fukomys_damarensis
ENSXMAG00000019192	SCAF8	100	88.889	ENSFHEG00000008284	SCAF8	100	89.610	Fundulus_heteroclitus
ENSXMAG00000019192	SCAF8	64	78.510	ENSGMOG00000018812	SCAF8	83	78.510	Gadus_morhua
ENSXMAG00000019192	SCAF8	75	71.838	ENSGALG00000013635	SCAF8	87	66.628	Gallus_gallus
ENSXMAG00000019192	SCAF8	100	96.534	ENSGAFG00000018033	SCAF8	100	96.534	Gambusia_affinis
ENSXMAG00000019192	SCAF8	78	77.768	ENSGACG00000006909	SCAF8	99	77.956	Gasterosteus_aculeatus
ENSXMAG00000019192	SCAF8	78	68.681	ENSGGOG00000008645	SCAF8	85	69.174	Gorilla_gorilla
ENSXMAG00000019192	SCAF8	100	77.415	ENSHBUG00000019537	SCAF8	100	77.060	Haplochromis_burtoni
ENSXMAG00000019192	SCAF8	78	68.025	ENSHGLG00000003619	SCAF8	92	68.395	Heterocephalus_glaber_female
ENSXMAG00000019192	SCAF8	77	67.875	ENSHGLG00100004708	SCAF8	91	68.250	Heterocephalus_glaber_male
ENSXMAG00000019192	SCAF8	77	68.625	ENSSTOG00000026043	SCAF8	85	69.000	Ictidomys_tridecemlineatus
ENSXMAG00000019192	SCAF8	77	68.244	ENSJJAG00000020480	Scaf8	85	68.742	Jaculus_jaculus
ENSXMAG00000019192	SCAF8	100	82.416	ENSKMAG00000012767	SCAF8	100	82.345	Kryptolebias_marmoratus
ENSXMAG00000019192	SCAF8	82	94.030	ENSLBEG00000012484	-	92	91.275	Labrus_bergylta
ENSXMAG00000019192	SCAF8	78	63.930	ENSLOCG00000016856	SCAF8	92	64.456	Lepisosteus_oculatus
ENSXMAG00000019192	SCAF8	75	71.503	ENSLAFG00000000022	SCAF8	86	68.719	Loxodonta_africana
ENSXMAG00000019192	SCAF8	78	68.804	ENSMFAG00000032738	SCAF8	85	69.174	Macaca_fascicularis
ENSXMAG00000019192	SCAF8	78	68.804	ENSMMUG00000015163	SCAF8	85	69.174	Macaca_mulatta
ENSXMAG00000019192	SCAF8	78	68.804	ENSMNEG00000043466	SCAF8	85	69.174	Macaca_nemestrina
ENSXMAG00000019192	SCAF8	77	68.789	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSXMAG00000019192	SCAF8	97	74.471	ENSMAMG00000009457	SCAF8	100	74.544	Mastacembelus_armatus
ENSXMAG00000019192	SCAF8	100	77.344	ENSMZEG00005005698	SCAF8	100	76.989	Maylandia_zebra
ENSXMAG00000019192	SCAF8	77	69.098	ENSMGAG00000012762	SCAF8	93	68.727	Meleagris_gallopavo
ENSXMAG00000019192	SCAF8	77	67.143	ENSMAUG00000009513	Scaf8	92	67.262	Mesocricetus_auratus
ENSXMAG00000019192	SCAF8	78	65.596	ENSMICG00000028965	SCAF8	89	65.826	Microcebus_murinus
ENSXMAG00000019192	SCAF8	78	66.824	ENSMOCG00000014950	Scaf8	88	66.941	Microtus_ochrogaster
ENSXMAG00000019192	SCAF8	98	73.241	ENSMMOG00000002216	SCAF8	99	73.280	Mola_mola
ENSXMAG00000019192	SCAF8	77	69.375	ENSMODG00000008301	SCAF8	85	69.625	Monodelphis_domestica
ENSXMAG00000019192	SCAF8	100	77.447	ENSMALG00000011584	SCAF8	100	77.447	Monopterus_albus
ENSXMAG00000019192	SCAF8	78	68.266	MGP_CAROLIEiJ_G0021016	Scaf8	92	68.635	Mus_caroli
ENSXMAG00000019192	SCAF8	78	68.266	ENSMUSG00000046201	Scaf8	93	68.635	Mus_musculus
ENSXMAG00000019192	SCAF8	78	68.758	MGP_PahariEiJ_G0023334	Scaf8	93	69.127	Mus_pahari
ENSXMAG00000019192	SCAF8	78	66.707	ENSMPUG00000001974	SCAF8	86	67.268	Mustela_putorius_furo
ENSXMAG00000019192	SCAF8	78	67.901	ENSMLUG00000029190	SCAF8	90	68.519	Myotis_lucifugus
ENSXMAG00000019192	SCAF8	78	68.512	ENSNGAG00000012332	Scaf8	86	68.881	Nannospalax_galili
ENSXMAG00000019192	SCAF8	84	77.847	ENSNBRG00000009067	SCAF8	93	79.266	Neolamprologus_brichardi
ENSXMAG00000019192	SCAF8	78	66.830	ENSNLEG00000015509	SCAF8	85	67.164	Nomascus_leucogenys
ENSXMAG00000019192	SCAF8	52	73.196	ENSOPRG00000018413	-	66	73.196	Ochotona_princeps
ENSXMAG00000019192	SCAF8	78	68.187	ENSODEG00000007296	SCAF8	91	68.557	Octodon_degus
ENSXMAG00000019192	SCAF8	77	83.650	ENSONIG00000008119	SCAF8	93	81.517	Oreochromis_niloticus
ENSXMAG00000019192	SCAF8	77	68.750	ENSOCUG00000026063	SCAF8	85	69.125	Oryctolagus_cuniculus
ENSXMAG00000019192	SCAF8	100	76.437	ENSORLG00000017358	SCAF8	100	76.170	Oryzias_latipes
ENSXMAG00000019192	SCAF8	100	76.295	ENSORLG00020002214	SCAF8	100	76.028	Oryzias_latipes_hni
ENSXMAG00000019192	SCAF8	100	76.437	ENSORLG00015015779	SCAF8	100	76.579	Oryzias_latipes_hsok
ENSXMAG00000019192	SCAF8	100	77.794	ENSOMEG00000015471	SCAF8	100	77.794	Oryzias_melastigma
ENSXMAG00000019192	SCAF8	78	66.827	ENSOGAG00000034223	SCAF8	83	67.308	Otolemur_garnettii
ENSXMAG00000019192	SCAF8	77	68.571	ENSOARG00000004159	SCAF8	86	69.193	Ovis_aries
ENSXMAG00000019192	SCAF8	78	68.681	ENSPPAG00000039826	SCAF8	85	69.174	Pan_paniscus
ENSXMAG00000019192	SCAF8	78	69.297	ENSPPRG00000023175	SCAF8	85	69.790	Panthera_pardus
ENSXMAG00000019192	SCAF8	77	69.164	ENSPTIG00000014836	SCAF8	85	69.663	Panthera_tigris_altaica
ENSXMAG00000019192	SCAF8	78	68.804	ENSPTRG00000018727	SCAF8	85	69.174	Pan_troglodytes
ENSXMAG00000019192	SCAF8	78	68.804	ENSPANG00000017489	SCAF8	85	66.338	Papio_anubis
ENSXMAG00000019192	SCAF8	78	69.472	ENSPKIG00000021212	SCAF8	93	69.895	Paramormyrops_kingsleyae
ENSXMAG00000019192	SCAF8	61	74.040	ENSPSIG00000008614	SCAF8	70	64.829	Pelodiscus_sinensis
ENSXMAG00000019192	SCAF8	77	66.310	ENSPEMG00000010531	Scaf8	92	66.429	Peromyscus_maniculatus_bairdii
ENSXMAG00000019192	SCAF8	78	69.877	ENSPCIG00000001141	SCAF8	92	70.000	Phascolarctos_cinereus
ENSXMAG00000019192	SCAF8	100	96.816	ENSPFOG00000004176	SCAF8	100	96.816	Poecilia_formosa
ENSXMAG00000019192	SCAF8	100	96.816	ENSPLAG00000021432	SCAF8	100	96.816	Poecilia_latipinna
ENSXMAG00000019192	SCAF8	100	97.250	ENSPMEG00000007591	SCAF8	100	97.250	Poecilia_mexicana
ENSXMAG00000019192	SCAF8	100	97.250	ENSPREG00000000652	SCAF8	100	97.250	Poecilia_reticulata
ENSXMAG00000019192	SCAF8	78	67.528	ENSPPYG00000017121	SCAF8	85	67.651	Pongo_abelii
ENSXMAG00000019192	SCAF8	71	79.431	ENSPCAG00000013044	SCAF8	81	79.599	Procavia_capensis
ENSXMAG00000019192	SCAF8	78	66.706	ENSPCOG00000002067	SCAF8	87	66.905	Propithecus_coquereli
ENSXMAG00000019192	SCAF8	78	69.193	ENSPVAG00000005582	SCAF8	87	69.441	Pteropus_vampyrus
ENSXMAG00000019192	SCAF8	100	77.415	ENSPNYG00000007277	SCAF8	100	77.060	Pundamilia_nyererei
ENSXMAG00000019192	SCAF8	81	71.173	ENSPNAG00000024740	SCAF8	86	72.485	Pygocentrus_nattereri
ENSXMAG00000019192	SCAF8	78	68.389	ENSRNOG00000016919	Scaf8	93	68.881	Rattus_norvegicus
ENSXMAG00000019192	SCAF8	78	68.804	ENSRBIG00000035769	SCAF8	85	69.174	Rhinopithecus_bieti
ENSXMAG00000019192	SCAF8	78	68.804	ENSRROG00000013580	SCAF8	85	69.174	Rhinopithecus_roxellana
ENSXMAG00000019192	SCAF8	78	68.681	ENSSBOG00000027023	SCAF8	92	69.174	Saimiri_boliviensis_boliviensis
ENSXMAG00000019192	SCAF8	78	68.889	ENSSHAG00000009915	SCAF8	86	69.136	Sarcophilus_harrisii
ENSXMAG00000019192	SCAF8	77	64.125	ENSSFOG00015009481	SCAF8	56	55.372	Scleropages_formosus
ENSXMAG00000019192	SCAF8	77	84.812	ENSSMAG00000008275	SCAF8	100	76.006	Scophthalmus_maximus
ENSXMAG00000019192	SCAF8	78	69.355	ENSSPUG00000015219	SCAF8	82	69.355	Sphenodon_punctatus
ENSXMAG00000019192	SCAF8	78	68.804	ENSSSCG00000004070	SCAF8	86	69.420	Sus_scrofa
ENSXMAG00000019192	SCAF8	77	69.134	ENSTGUG00000011151	SCAF8	93	69.511	Taeniopygia_guttata
ENSXMAG00000019192	SCAF8	100	71.975	ENSTRUG00000009243	SCAF8	100	70.638	Takifugu_rubripes
ENSXMAG00000019192	SCAF8	78	78.273	ENSTNIG00000016885	SCAF8	99	78.062	Tetraodon_nigroviridis
ENSXMAG00000019192	SCAF8	77	66.916	ENSTTRG00000014538	SCAF8	91	68.040	Tursiops_truncatus
ENSXMAG00000019192	SCAF8	78	68.966	ENSUAMG00000024736	SCAF8	85	69.451	Ursus_americanus
ENSXMAG00000019192	SCAF8	76	68.615	ENSUMAG00000013404	SCAF8	85	69.250	Ursus_maritimus
ENSXMAG00000019192	SCAF8	77	68.664	ENSVVUG00000007532	SCAF8	86	69.084	Vulpes_vulpes
ENSXMAG00000019192	SCAF8	72	69.220	ENSXETG00000013132	scaf8	80	66.621	Xenopus_tropicalis