EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019222 (Gene tree)
Gene ID: 102229139
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 30687 bases
Position: chr19:11733397-11764083
Accession: 102229139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019264	RrnaAD	PF00398.20	1.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019292	-	1059	XM_005799153	ENSXMAP00000019264	352 (aa)	XP_005799210	M4AXR9

Gene Model

Click here to download ENSXMAG00000019222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019222	tfb1m	97	67.449	ENSG00000029639	TFB1M	99	67.449	Homo_sapiens
ENSXMAG00000019222	tfb1m	100	83.193	ENSAPOG00000015493	tfb1m	100	83.193	Acanthochromis_polyacanthus
ENSXMAG00000019222	tfb1m	93	67.781	ENSAMEG00000012761	TFB1M	95	67.781	Ailuropoda_melanoleuca
ENSXMAG00000019222	tfb1m	99	81.375	ENSACIG00000014290	tfb1m	99	81.375	Amphilophus_citrinellus
ENSXMAG00000019222	tfb1m	100	82.913	ENSAOCG00000004027	tfb1m	100	82.913	Amphiprion_ocellaris
ENSXMAG00000019222	tfb1m	100	82.913	ENSAPEG00000020359	tfb1m	100	82.913	Amphiprion_percula
ENSXMAG00000019222	tfb1m	99	82.286	ENSATEG00000006826	tfb1m	99	82.286	Anabas_testudineus
ENSXMAG00000019222	tfb1m	93	69.909	ENSAPLG00000006328	TFB1M	95	69.909	Anas_platyrhynchos
ENSXMAG00000019222	tfb1m	93	71.125	ENSACAG00000005244	TFB1M	95	71.125	Anolis_carolinensis
ENSXMAG00000019222	tfb1m	93	70.336	ENSANAG00000021469	TFB1M	95	70.336	Aotus_nancymaae
ENSXMAG00000019222	tfb1m	96	85.799	ENSACLG00000018734	tfb1m	94	85.799	Astatotilapia_calliptera
ENSXMAG00000019222	tfb1m	96	77.353	ENSAMXG00000036128	tfb1m	93	77.353	Astyanax_mexicanus
ENSXMAG00000019222	tfb1m	93	70.821	ENSBTAG00000031895	TFB1M	98	73.423	Bos_taurus
ENSXMAG00000019222	tfb1m	97	41.908	WBGene00020189	tfbm-1	92	41.908	Caenorhabditis_elegans
ENSXMAG00000019222	tfb1m	56	30.348	WBGene00008455	E02H1.1	57	30.348	Caenorhabditis_elegans
ENSXMAG00000019222	tfb1m	93	70.336	ENSCJAG00000012540	TFB1M	95	70.336	Callithrix_jacchus
ENSXMAG00000019222	tfb1m	93	69.725	ENSCAFG00000000581	TFB1M	95	69.725	Canis_familiaris
ENSXMAG00000019222	tfb1m	93	69.725	ENSCAFG00020015224	TFB1M	95	69.725	Canis_lupus_dingo
ENSXMAG00000019222	tfb1m	95	70.359	ENSCHIG00000017013	TFB1M	100	70.359	Capra_hircus
ENSXMAG00000019222	tfb1m	93	70.031	ENSTSYG00000012298	TFB1M	95	70.031	Carlito_syrichta
ENSXMAG00000019222	tfb1m	66	50.431	ENSCAPG00000013843	TFB1M	77	50.431	Cavia_aperea
ENSXMAG00000019222	tfb1m	93	70.336	ENSCPOG00000030422	TFB1M	95	70.336	Cavia_porcellus
ENSXMAG00000019222	tfb1m	93	70.642	ENSCCAG00000015250	TFB1M	95	70.642	Cebus_capucinus
ENSXMAG00000019222	tfb1m	95	46.866	ENSCATG00000009009	TFB1M	96	47.463	Cercocebus_atys
ENSXMAG00000019222	tfb1m	93	70.517	ENSCLAG00000004500	TFB1M	96	70.517	Chinchilla_lanigera
ENSXMAG00000019222	tfb1m	92	69.659	ENSCSAG00000013259	TFB1M	99	67.742	Chlorocebus_sabaeus
ENSXMAG00000019222	tfb1m	93	67.378	ENSCHOG00000011245	TFB1M	95	67.378	Choloepus_hoffmanni
ENSXMAG00000019222	tfb1m	92	71.827	ENSCPBG00000016320	TFB1M	95	71.827	Chrysemys_picta_bellii
ENSXMAG00000019222	tfb1m	88	45.981	ENSCING00000003901	-	81	45.981	Ciona_intestinalis
ENSXMAG00000019222	tfb1m	88	48.232	ENSCSAVG00000004721	-	81	48.232	Ciona_savignyi
ENSXMAG00000019222	tfb1m	93	70.336	ENSCANG00000029768	TFB1M	97	70.336	Colobus_angolensis_palliatus
ENSXMAG00000019222	tfb1m	93	69.301	ENSCGRG00001022866	Tfb1m	96	69.301	Cricetulus_griseus_chok1gshd
ENSXMAG00000019222	tfb1m	89	69.745	ENSCGRG00000018084	Tfb1m	95	69.745	Cricetulus_griseus_crigri
ENSXMAG00000019222	tfb1m	100	79.320	ENSCSEG00000000131	tfb1m	99	79.320	Cynoglossus_semilaevis
ENSXMAG00000019222	tfb1m	100	92.330	ENSCVAG00000009201	tfb1m	100	92.330	Cyprinodon_variegatus
ENSXMAG00000019222	tfb1m	94	75.455	ENSDARG00000040727	tfb1m	99	78.868	Danio_rerio
ENSXMAG00000019222	tfb1m	97	66.377	ENSDNOG00000015984	-	95	66.377	Dasypus_novemcinctus
ENSXMAG00000019222	tfb1m	82	58.188	ENSDNOG00000032672	-	99	58.188	Dasypus_novemcinctus
ENSXMAG00000019222	tfb1m	93	70.213	ENSDORG00000012938	Tfb1m	95	70.213	Dipodomys_ordii
ENSXMAG00000019222	tfb1m	90	47.812	FBgn0261381	mtTFB1	95	47.812	Drosophila_melanogaster
ENSXMAG00000019222	tfb1m	93	49.390	ENSETEG00000005709	TFB1M	94	49.390	Echinops_telfairi
ENSXMAG00000019222	tfb1m	92	55.077	ENSEBUG00000010530	tfb1m	92	55.046	Eptatretus_burgeri
ENSXMAG00000019222	tfb1m	64	30.000	ENSEBUG00000006158	dimt1l	85	30.000	Eptatretus_burgeri
ENSXMAG00000019222	tfb1m	93	68.807	ENSEASG00005018887	TFB1M	94	68.807	Equus_asinus_asinus
ENSXMAG00000019222	tfb1m	93	69.725	ENSECAG00000020997	TFB1M	94	69.725	Equus_caballus
ENSXMAG00000019222	tfb1m	93	70.948	ENSEEUG00000014899	TFB1M	97	70.948	Erinaceus_europaeus
ENSXMAG00000019222	tfb1m	95	80.781	ENSELUG00000002752	tfb1m	85	80.781	Esox_lucius
ENSXMAG00000019222	tfb1m	93	68.807	ENSFCAG00000038785	TFB1M	95	68.807	Felis_catus
ENSXMAG00000019222	tfb1m	95	67.665	ENSFALG00000012500	TFB1M	96	67.665	Ficedula_albicollis
ENSXMAG00000019222	tfb1m	91	71.250	ENSFDAG00000016985	TFB1M	95	70.898	Fukomys_damarensis
ENSXMAG00000019222	tfb1m	100	92.330	ENSFHEG00000008407	tfb1m	100	92.330	Fundulus_heteroclitus
ENSXMAG00000019222	tfb1m	95	80.838	ENSGMOG00000018738	tfb1m	96	80.838	Gadus_morhua
ENSXMAG00000019222	tfb1m	90	70.032	ENSGALG00000013647	TFB1M	93	69.325	Gallus_gallus
ENSXMAG00000019222	tfb1m	100	98.295	ENSGAFG00000017997	tfb1m	100	98.295	Gambusia_affinis
ENSXMAG00000019222	tfb1m	100	82.203	ENSGACG00000006884	tfb1m	100	82.203	Gasterosteus_aculeatus
ENSXMAG00000019222	tfb1m	95	70.659	ENSGAGG00000025345	TFB1M	97	70.659	Gopherus_agassizii
ENSXMAG00000019222	tfb1m	97	67.449	ENSGGOG00000012189	TFB1M	99	67.449	Gorilla_gorilla
ENSXMAG00000019222	tfb1m	96	85.503	ENSHBUG00000019396	tfb1m	94	85.503	Haplochromis_burtoni
ENSXMAG00000019222	tfb1m	93	71.560	ENSHGLG00000002028	TFB1M	94	71.560	Heterocephalus_glaber_female
ENSXMAG00000019222	tfb1m	93	71.560	ENSHGLG00100001412	TFB1M	94	71.560	Heterocephalus_glaber_male
ENSXMAG00000019222	tfb1m	96	80.712	ENSHCOG00000014135	tfb1m	96	80.712	Hippocampus_comes
ENSXMAG00000019222	tfb1m	93	76.900	ENSIPUG00000010964	tfb1m	96	76.900	Ictalurus_punctatus
ENSXMAG00000019222	tfb1m	98	68.605	ENSSTOG00000026264	TFB1M	99	68.605	Ictidomys_tridecemlineatus
ENSXMAG00000019222	tfb1m	93	69.605	ENSJJAG00000022171	Tfb1m	93	69.605	Jaculus_jaculus
ENSXMAG00000019222	tfb1m	100	85.511	ENSKMAG00000012667	tfb1m	100	85.511	Kryptolebias_marmoratus
ENSXMAG00000019222	tfb1m	100	81.793	ENSLBEG00000011505	tfb1m	100	81.793	Labrus_bergylta
ENSXMAG00000019222	tfb1m	96	72.189	ENSLACG00000012594	TFB1M	95	72.189	Latimeria_chalumnae
ENSXMAG00000019222	tfb1m	95	69.733	ENSLOCG00000016850	tfb1m	96	69.733	Lepisosteus_oculatus
ENSXMAG00000019222	tfb1m	93	69.325	ENSLAFG00000014035	-	95	69.113	Loxodonta_africana
ENSXMAG00000019222	tfb1m	91	56.832	ENSLAFG00000032309	-	100	56.832	Loxodonta_africana
ENSXMAG00000019222	tfb1m	95	68.358	ENSMFAG00000031968	TFB1M	97	68.358	Macaca_fascicularis
ENSXMAG00000019222	tfb1m	95	68.657	ENSMMUG00000011171	TFB1M	97	68.657	Macaca_mulatta
ENSXMAG00000019222	tfb1m	95	68.358	ENSMNEG00000042278	TFB1M	97	68.358	Macaca_nemestrina
ENSXMAG00000019222	tfb1m	93	70.642	ENSMLEG00000000044	TFB1M	95	70.642	Mandrillus_leucophaeus
ENSXMAG00000019222	tfb1m	99	82.051	ENSMAMG00000009423	tfb1m	99	82.051	Mastacembelus_armatus
ENSXMAG00000019222	tfb1m	96	85.799	ENSMZEG00005005640	tfb1m	90	85.799	Maylandia_zebra
ENSXMAG00000019222	tfb1m	72	74.510	ENSMGAG00000012779	TFB1M	99	73.485	Meleagris_gallopavo
ENSXMAG00000019222	tfb1m	93	70.821	ENSMAUG00000006705	Tfb1m	95	70.821	Mesocricetus_auratus
ENSXMAG00000019222	tfb1m	93	70.948	ENSMICG00000045849	TFB1M	95	70.948	Microcebus_murinus
ENSXMAG00000019222	tfb1m	93	70.552	ENSMOCG00000013879	Tfb1m	95	70.213	Microtus_ochrogaster
ENSXMAG00000019222	tfb1m	99	83.191	ENSMMOG00000002203	tfb1m	98	83.191	Mola_mola
ENSXMAG00000019222	tfb1m	93	69.939	ENSMODG00000008169	TFB1M	96	69.605	Monodelphis_domestica
ENSXMAG00000019222	tfb1m	98	81.739	ENSMALG00000011657	tfb1m	92	81.739	Monopterus_albus
ENSXMAG00000019222	tfb1m	93	69.909	MGP_CAROLIEiJ_G0021018	Tfb1m	95	69.909	Mus_caroli
ENSXMAG00000019222	tfb1m	93	69.909	ENSMUSG00000036983	Tfb1m	95	69.909	Mus_musculus
ENSXMAG00000019222	tfb1m	93	71.166	MGP_PahariEiJ_G0023336	Tfb1m	95	70.821	Mus_pahari
ENSXMAG00000019222	tfb1m	93	69.909	MGP_SPRETEiJ_G0021923	Tfb1m	95	69.909	Mus_spretus
ENSXMAG00000019222	tfb1m	97	66.181	ENSMPUG00000002073	TFB1M	99	66.181	Mustela_putorius_furo
ENSXMAG00000019222	tfb1m	93	69.725	ENSMLUG00000011329	TFB1M	95	69.725	Myotis_lucifugus
ENSXMAG00000019222	tfb1m	99	66.954	ENSNGAG00000015154	Tfb1m	97	66.954	Nannospalax_galili
ENSXMAG00000019222	tfb1m	96	85.503	ENSNBRG00000009004	tfb1m	94	85.503	Neolamprologus_brichardi
ENSXMAG00000019222	tfb1m	97	67.742	ENSNLEG00000034352	TFB1M	99	67.742	Nomascus_leucogenys
ENSXMAG00000019222	tfb1m	93	57.492	ENSMEUG00000001699	-	94	57.492	Notamacropus_eugenii
ENSXMAG00000019222	tfb1m	97	53.079	ENSOPRG00000008921	TFB1M	99	53.079	Ochotona_princeps
ENSXMAG00000019222	tfb1m	93	68.997	ENSODEG00000005915	TFB1M	94	68.997	Octodon_degus
ENSXMAG00000019222	tfb1m	96	86.391	ENSONIG00000008109	tfb1m	98	86.391	Oreochromis_niloticus
ENSXMAG00000019222	tfb1m	93	69.725	ENSOCUG00000012154	TFB1M	96	69.725	Oryctolagus_cuniculus
ENSXMAG00000019222	tfb1m	97	83.578	ENSORLG00000017328	tfb1m	83	83.578	Oryzias_latipes
ENSXMAG00000019222	tfb1m	97	83.871	ENSORLG00020002250	tfb1m	99	83.871	Oryzias_latipes_hni
ENSXMAG00000019222	tfb1m	97	83.578	ENSORLG00015016067	tfb1m	99	83.578	Oryzias_latipes_hsok
ENSXMAG00000019222	tfb1m	100	82.670	ENSOMEG00000015641	tfb1m	100	82.670	Oryzias_melastigma
ENSXMAG00000019222	tfb1m	93	67.378	ENSOGAG00000011681	TFB1M	95	67.378	Otolemur_garnettii
ENSXMAG00000019222	tfb1m	95	69.118	ENSOARG00000004216	TFB1M	100	69.118	Ovis_aries
ENSXMAG00000019222	tfb1m	93	69.725	ENSPPAG00000030834	TFB1M	95	69.725	Pan_paniscus
ENSXMAG00000019222	tfb1m	93	68.502	ENSPPRG00000013578	TFB1M	95	68.502	Panthera_pardus
ENSXMAG00000019222	tfb1m	93	68.502	ENSPTIG00000003540	TFB1M	95	68.502	Panthera_tigris_altaica
ENSXMAG00000019222	tfb1m	97	67.155	ENSPTRG00000018730	TFB1M	99	67.155	Pan_troglodytes
ENSXMAG00000019222	tfb1m	95	68.657	ENSPANG00000007489	TFB1M	97	68.657	Papio_anubis
ENSXMAG00000019222	tfb1m	95	77.844	ENSPKIG00000021117	tfb1m	95	77.844	Paramormyrops_kingsleyae
ENSXMAG00000019222	tfb1m	95	70.270	ENSPSIG00000006643	TFB1M	97	70.270	Pelodiscus_sinensis
ENSXMAG00000019222	tfb1m	95	82.583	ENSPMGG00000011289	tfb1m	96	82.583	Periophthalmus_magnuspinnatus
ENSXMAG00000019222	tfb1m	99	66.476	ENSPEMG00000010410	Tfb1m	100	66.476	Peromyscus_maniculatus_bairdii
ENSXMAG00000019222	tfb1m	56	63.959	ENSPMAG00000008056	tfb1m	93	62.019	Petromyzon_marinus
ENSXMAG00000019222	tfb1m	93	70.336	ENSPCIG00000001010	TFB1M	91	70.336	Phascolarctos_cinereus
ENSXMAG00000019222	tfb1m	100	96.328	ENSPFOG00000005139	tfb1m	100	96.328	Poecilia_formosa
ENSXMAG00000019222	tfb1m	100	96.875	ENSPLAG00000021410	tfb1m	100	96.875	Poecilia_latipinna
ENSXMAG00000019222	tfb1m	100	96.591	ENSPMEG00000020166	tfb1m	100	96.591	Poecilia_mexicana
ENSXMAG00000019222	tfb1m	100	96.591	ENSPREG00000022392	tfb1m	100	96.591	Poecilia_reticulata
ENSXMAG00000019222	tfb1m	97	65.497	ENSPPYG00000017123	TFB1M	99	65.497	Pongo_abelii
ENSXMAG00000019222	tfb1m	83	57.732	ENSPCAG00000007078	TFB1M	97	57.732	Procavia_capensis
ENSXMAG00000019222	tfb1m	93	71.254	ENSPCOG00000028453	TFB1M	95	71.254	Propithecus_coquereli
ENSXMAG00000019222	tfb1m	93	70.642	ENSPVAG00000015818	TFB1M	95	70.642	Pteropus_vampyrus
ENSXMAG00000019222	tfb1m	96	85.799	ENSPNYG00000007330	tfb1m	94	85.799	Pundamilia_nyererei
ENSXMAG00000019222	tfb1m	94	77.879	ENSPNAG00000007507	tfb1m	93	77.879	Pygocentrus_nattereri
ENSXMAG00000019222	tfb1m	93	70.821	ENSRNOG00000056223	Tfb1m	95	70.821	Rattus_norvegicus
ENSXMAG00000019222	tfb1m	93	70.642	ENSRBIG00000039975	TFB1M	97	70.642	Rhinopithecus_bieti
ENSXMAG00000019222	tfb1m	93	70.336	ENSRROG00000033802	TFB1M	97	70.336	Rhinopithecus_roxellana
ENSXMAG00000019222	tfb1m	93	70.031	ENSSBOG00000008663	TFB1M	95	70.031	Saimiri_boliviensis_boliviensis
ENSXMAG00000019222	tfb1m	80	69.149	ENSSHAG00000013259	TFB1M	82	69.149	Sarcophilus_harrisii
ENSXMAG00000019222	tfb1m	96	72.997	ENSSFOG00015009739	tfb1m	96	72.997	Scleropages_formosus
ENSXMAG00000019222	tfb1m	100	81.586	ENSSMAG00000008229	tfb1m	100	81.586	Scophthalmus_maximus
ENSXMAG00000019222	tfb1m	100	81.232	ENSSDUG00000011871	tfb1m	100	81.232	Seriola_dumerili
ENSXMAG00000019222	tfb1m	100	80.672	ENSSLDG00000023923	tfb1m	100	80.672	Seriola_lalandi_dorsalis
ENSXMAG00000019222	tfb1m	63	72.072	ENSSARG00000003159	TFB1M	100	72.072	Sorex_araneus
ENSXMAG00000019222	tfb1m	97	66.765	ENSSPUG00000015253	TFB1M	99	66.765	Sphenodon_punctatus
ENSXMAG00000019222	tfb1m	100	83.754	ENSSPAG00000019515	tfb1m	100	83.754	Stegastes_partitus
ENSXMAG00000019222	tfb1m	93	70.031	ENSSSCG00000024361	TFB1M	96	70.031	Sus_scrofa
ENSXMAG00000019222	tfb1m	95	67.066	ENSTGUG00000011136	TFB1M	97	67.066	Taeniopygia_guttata
ENSXMAG00000019222	tfb1m	100	83.708	ENSTRUG00000020334	tfb1m	100	83.708	Takifugu_rubripes
ENSXMAG00000019222	tfb1m	62	86.301	ENSTNIG00000016882	tfb1m	97	86.301	Tetraodon_nigroviridis
ENSXMAG00000019222	tfb1m	93	68.807	ENSTBEG00000008769	TFB1M	94	68.807	Tupaia_belangeri
ENSXMAG00000019222	tfb1m	93	70.642	ENSTTRG00000006327	TFB1M	97	70.642	Tursiops_truncatus
ENSXMAG00000019222	tfb1m	93	68.098	ENSUAMG00000017802	TFB1M	94	67.781	Ursus_americanus
ENSXMAG00000019222	tfb1m	93	68.389	ENSUMAG00000013377	TFB1M	86	68.389	Ursus_maritimus
ENSXMAG00000019222	tfb1m	93	69.113	ENSVPAG00000010148	TFB1M	96	69.113	Vicugna_pacos
ENSXMAG00000019222	tfb1m	93	69.113	ENSVVUG00000007643	TFB1M	96	69.113	Vulpes_vulpes
ENSXMAG00000019222	tfb1m	94	72.810	ENSXETG00000007852	tfb1m	96	72.810	Xenopus_tropicalis
ENSXMAG00000019222	tfb1m	100	99.716	ENSXCOG00000013230	tfb1m	100	99.716	Xiphophorus_couchianus