EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019336 (Gene tree)
Gene ID: 102223791
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2800 bases
Position: chr6:12224522-12227321
Accession: 102223791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019382	RRM_1	PF00076.22	1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019410	-	1313	XM_005797106	ENSXMAP00000019382	183 (aa)	XP_005797163	M4AY37

Gene Model

Click here to download ENSXMAG00000019336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019336	cirbpa	73	84.211	ENSAPOG00000004458	cirbpa	72	83.582	Acanthochromis_polyacanthus
ENSXMAG00000019336	cirbpa	100	81.081	ENSACIG00000016116	cirbpa	100	83.784	Amphilophus_citrinellus
ENSXMAG00000019336	cirbpa	100	74.332	ENSAOCG00000016212	cirbpa	100	73.298	Amphiprion_ocellaris
ENSXMAG00000019336	cirbpa	100	74.468	ENSAPEG00000011989	cirbpa	100	74.346	Amphiprion_percula
ENSXMAG00000019336	cirbpa	100	85.326	ENSATEG00000014985	cirbpa	100	81.522	Anabas_testudineus
ENSXMAG00000019336	cirbpa	98	87.845	ENSACLG00000002094	-	100	85.405	Astatotilapia_calliptera
ENSXMAG00000019336	cirbpa	100	55.769	ENSAMXG00000015612	cirbpb	82	58.919	Astyanax_mexicanus
ENSXMAG00000019336	cirbpa	100	66.667	ENSCSEG00000014344	cirbpa	100	70.769	Cynoglossus_semilaevis
ENSXMAG00000019336	cirbpa	100	84.946	ENSCVAG00000004853	cirbpa	100	86.559	Cyprinodon_variegatus
ENSXMAG00000019336	cirbpa	100	58.602	ENSDARG00000103672	cirbpa	100	59.140	Danio_rerio
ENSXMAG00000019336	cirbpa	73	56.391	ENSELUG00000004675	-	100	47.594	Esox_lucius
ENSXMAG00000019336	cirbpa	99	79.570	ENSFHEG00000002580	cirbpa	100	81.183	Fundulus_heteroclitus
ENSXMAG00000019336	cirbpa	99	55.612	ENSGMOG00000007179	cirbpb	98	51.724	Gadus_morhua
ENSXMAG00000019336	cirbpa	100	98.919	ENSGAFG00000008654	cirbpa	100	98.919	Gambusia_affinis
ENSXMAG00000019336	cirbpa	100	70.157	ENSGACG00000015206	cirbpa	100	70.526	Gasterosteus_aculeatus
ENSXMAG00000019336	cirbpa	100	63.934	ENSGACG00000014978	-	100	62.842	Gasterosteus_aculeatus
ENSXMAG00000019336	cirbpa	100	88.108	ENSHBUG00000022060	cirbpa	100	85.946	Haplochromis_burtoni
ENSXMAG00000019336	cirbpa	100	71.503	ENSKMAG00000005905	cirbpa	100	74.595	Kryptolebias_marmoratus
ENSXMAG00000019336	cirbpa	100	66.120	ENSLBEG00000000292	cirbpa	100	63.784	Labrus_bergylta
ENSXMAG00000019336	cirbpa	100	84.153	ENSMAMG00000010168	cirbpa	100	84.699	Mastacembelus_armatus
ENSXMAG00000019336	cirbpa	100	88.108	ENSMZEG00005025577	-	100	85.946	Maylandia_zebra
ENSXMAG00000019336	cirbpa	100	85.792	ENSMALG00000020092	cirbpa	100	87.978	Monopterus_albus
ENSXMAG00000019336	cirbpa	100	88.108	ENSNBRG00000019658	cirbpa	100	85.946	Neolamprologus_brichardi
ENSXMAG00000019336	cirbpa	100	81.081	ENSONIG00000010169	cirbpa	100	83.784	Oreochromis_niloticus
ENSXMAG00000019336	cirbpa	100	80.000	ENSORLG00000015433	cirbpa	100	81.622	Oryzias_latipes
ENSXMAG00000019336	cirbpa	100	80.000	ENSORLG00020016909	cirbpa	100	81.622	Oryzias_latipes_hni
ENSXMAG00000019336	cirbpa	100	80.000	ENSORLG00015016636	cirbpa	100	81.622	Oryzias_latipes_hsok
ENSXMAG00000019336	cirbpa	100	83.696	ENSOMEG00000021469	cirbpa	73	84.239	Oryzias_melastigma
ENSXMAG00000019336	cirbpa	99	72.973	ENSPMGG00000017342	cirbpa	95	73.016	Periophthalmus_magnuspinnatus
ENSXMAG00000019336	cirbpa	100	93.048	ENSPFOG00000015653	cirbpa	100	96.791	Poecilia_formosa
ENSXMAG00000019336	cirbpa	99	93.514	ENSPLAG00000011125	cirbpa	100	97.297	Poecilia_latipinna
ENSXMAG00000019336	cirbpa	100	93.548	ENSPMEG00000013878	cirbpa	100	97.312	Poecilia_mexicana
ENSXMAG00000019336	cirbpa	99	97.802	ENSPREG00000018042	cirbpa	98	97.802	Poecilia_reticulata
ENSXMAG00000019336	cirbpa	100	88.108	ENSPNYG00000007198	-	100	85.946	Pundamilia_nyererei
ENSXMAG00000019336	cirbpa	100	55.610	ENSPNAG00000019997	cirbpb	100	57.426	Pygocentrus_nattereri
ENSXMAG00000019336	cirbpa	100	59.043	ENSSFOG00015005346	cirbpb	100	67.895	Scleropages_formosus
ENSXMAG00000019336	cirbpa	100	71.212	ENSSMAG00000002412	cirbpa	100	71.717	Scophthalmus_maximus
ENSXMAG00000019336	cirbpa	100	70.492	ENSSDUG00000016099	cirbpa	100	67.526	Seriola_dumerili
ENSXMAG00000019336	cirbpa	100	70.811	ENSSPAG00000023037	cirbpa	99	67.213	Stegastes_partitus
ENSXMAG00000019336	cirbpa	100	73.770	ENSTRUG00000010187	cirbpa	100	72.678	Takifugu_rubripes
ENSXMAG00000019336	cirbpa	100	76.087	ENSTNIG00000000450	cirbpa	100	77.174	Tetraodon_nigroviridis
ENSXMAG00000019336	cirbpa	99	98.901	ENSXCOG00000008262	cirbpa	99	98.901	Xiphophorus_couchianus