EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019370 (Gene tree)
Gene ID: 102225789
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 62658 bases
Position: chr1:8745411-8808068
Accession: 102225789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037338	ResIII	PF04851.15	1.9e-07	1	1
ENSXMAP00000019421	ResIII	PF04851.15	2e-07	1	1
ENSXMAP00000033094	ResIII	PF04851.15	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039158	-	4683	XM_023332504	ENSXMAP00000037338	1490 (aa)	XP_023188272	UPI000C6ED7E2
ENSXMAT00000019449	-	4614	-	ENSXMAP00000019421	1471 (aa)	-	M4AY76
ENSXMAT00000023656	-	4706	XM_014469168	ENSXMAP00000033094	1465 (aa)	XP_014324654	-

Gene Model

Click here to download ENSXMAG00000019370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019370	-	91	59.582	ENSG00000164080	RAD54L2	96	60.784	Homo_sapiens
ENSXMAG00000019370	-	100	81.292	ENSAPOG00000024141	-	100	81.157	Acanthochromis_polyacanthus
ENSXMAG00000019370	-	91	59.582	ENSAMEG00000009326	RAD54L2	94	58.101	Ailuropoda_melanoleuca
ENSXMAG00000019370	-	85	64.364	ENSACIG00000018079	rad54l2	92	61.826	Amphilophus_citrinellus
ENSXMAG00000019370	-	94	76.454	ENSACIG00000015932	-	100	75.808	Amphilophus_citrinellus
ENSXMAG00000019370	-	100	80.782	ENSAOCG00000022380	-	99	80.767	Amphiprion_ocellaris
ENSXMAG00000019370	-	97	61.070	ENSATEG00000009346	rad54l2	96	60.376	Anabas_testudineus
ENSXMAG00000019370	-	100	78.969	ENSATEG00000006641	-	98	79.170	Anabas_testudineus
ENSXMAG00000019370	-	95	60.334	ENSAPLG00000002121	RAD54L2	98	59.696	Anas_platyrhynchos
ENSXMAG00000019370	-	74	70.430	ENSACAG00000015883	RAD54L2	95	63.748	Anolis_carolinensis
ENSXMAG00000019370	-	91	59.510	ENSANAG00000025396	RAD54L2	91	58.853	Aotus_nancymaae
ENSXMAG00000019370	-	100	79.357	ENSACLG00000018296	-	100	79.035	Astatotilapia_calliptera
ENSXMAG00000019370	-	97	59.677	ENSACLG00000019111	rad54l2	96	59.118	Astatotilapia_calliptera
ENSXMAG00000019370	-	94	61.320	ENSAMXG00000013807	rad54l2	94	60.363	Astyanax_mexicanus
ENSXMAG00000019370	-	91	59.438	ENSBTAG00000032253	RAD54L2	97	56.484	Bos_taurus
ENSXMAG00000019370	-	91	59.798	ENSCJAG00000005575	RAD54L2	91	59.140	Callithrix_jacchus
ENSXMAG00000019370	-	93	58.386	ENSCAFG00000010120	RAD54L2	94	57.891	Canis_familiaris
ENSXMAG00000019370	-	93	58.386	ENSCAFG00020022320	RAD54L2	94	57.891	Canis_lupus_dingo
ENSXMAG00000019370	-	93	58.526	ENSCHIG00000008830	RAD54L2	97	56.589	Capra_hircus
ENSXMAG00000019370	-	93	58.485	ENSTSYG00000013200	RAD54L2	94	57.990	Carlito_syrichta
ENSXMAG00000019370	-	79	68.598	ENSCAPG00000016465	RAD54L2	91	66.909	Cavia_aperea
ENSXMAG00000019370	-	93	58.485	ENSCPOG00000005941	RAD54L2	94	57.851	Cavia_porcellus
ENSXMAG00000019370	-	79	59.685	ENSCCAG00000024465	RAD54L2	90	59.259	Cebus_capucinus
ENSXMAG00000019370	-	93	58.947	ENSCATG00000039891	RAD54L2	95	58.310	Cercocebus_atys
ENSXMAG00000019370	-	93	58.473	ENSCLAG00000008059	RAD54L2	94	58.193	Chinchilla_lanigera
ENSXMAG00000019370	-	93	58.824	ENSCSAG00000014027	RAD54L2	94	58.328	Chlorocebus_sabaeus
ENSXMAG00000019370	-	97	60.041	ENSCPBG00000016624	RAD54L2	98	59.337	Chrysemys_picta_bellii
ENSXMAG00000019370	-	69	50.096	ENSCING00000009208	-	96	49.392	Ciona_intestinalis
ENSXMAG00000019370	-	93	58.555	ENSCANG00000036093	RAD54L2	95	58.060	Colobus_angolensis_palliatus
ENSXMAG00000019370	-	91	59.740	ENSCGRG00000007921	Rad54l2	91	59.353	Cricetulus_griseus_crigri
ENSXMAG00000019370	-	86	75.900	ENSCSEG00000006115	-	100	74.164	Cynoglossus_semilaevis
ENSXMAG00000019370	-	98	57.973	ENSCSEG00000001740	rad54l2	96	57.162	Cynoglossus_semilaevis
ENSXMAG00000019370	-	100	86.622	ENSCVAG00000005376	-	97	87.675	Cyprinodon_variegatus
ENSXMAG00000019370	-	94	60.977	ENSCVAG00000017887	rad54l2	96	58.464	Cyprinodon_variegatus
ENSXMAG00000019370	-	94	63.255	ENSDARG00000063031	rad54l2	97	62.271	Danio_rerio
ENSXMAG00000019370	-	93	58.110	ENSDNOG00000017359	RAD54L2	97	57.722	Dasypus_novemcinctus
ENSXMAG00000019370	-	86	66.746	ENSDORG00000000651	Rad54l2	92	66.272	Dipodomys_ordii
ENSXMAG00000019370	-	68	51.339	FBgn0034976	CG4049	60	52.036	Drosophila_melanogaster
ENSXMAG00000019370	-	92	57.462	ENSETEG00000013290	RAD54L2	98	57.819	Echinops_telfairi
ENSXMAG00000019370	-	70	55.586	ENSEBUG00000001591	rad54l2	76	55.912	Eptatretus_burgeri
ENSXMAG00000019370	-	93	58.667	ENSEASG00005012868	RAD54L2	94	58.101	Equus_asinus_asinus
ENSXMAG00000019370	-	93	58.526	ENSECAG00000014759	RAD54L2	94	58.101	Equus_caballus
ENSXMAG00000019370	-	79	67.490	ENSEEUG00000001759	RAD54L2	78	80.688	Erinaceus_europaeus
ENSXMAG00000019370	-	97	68.333	ENSELUG00000011246	RAD54L2	97	68.325	Esox_lucius
ENSXMAG00000019370	-	93	58.567	ENSFCAG00000018563	RAD54L2	94	58.101	Felis_catus
ENSXMAG00000019370	-	82	65.885	ENSFALG00000008938	RAD54L2	96	63.310	Ficedula_albicollis
ENSXMAG00000019370	-	93	58.626	ENSFDAG00000017084	RAD54L2	94	58.205	Fukomys_damarensis
ENSXMAG00000019370	-	100	88.490	ENSFHEG00000017845	-	98	89.003	Fundulus_heteroclitus
ENSXMAG00000019370	-	94	61.719	ENSFHEG00000023241	rad54l2	96	58.169	Fundulus_heteroclitus
ENSXMAG00000019370	-	90	62.631	ENSGMOG00000010674	rad54l2	97	61.601	Gadus_morhua
ENSXMAG00000019370	-	95	61.015	ENSGALG00000003243	RAD54L2	97	58.328	Gallus_gallus
ENSXMAG00000019370	-	94	61.380	ENSGAFG00000021535	rad54l2	96	58.277	Gambusia_affinis
ENSXMAG00000019370	-	99	95.371	ENSGAFG00000002396	-	98	95.983	Gambusia_affinis
ENSXMAG00000019370	-	94	60.907	ENSGACG00000001558	rad54l2	97	61.314	Gasterosteus_aculeatus
ENSXMAG00000019370	-	87	76.762	ENSGACG00000005642	-	99	75.715	Gasterosteus_aculeatus
ENSXMAG00000019370	-	92	61.373	ENSGAGG00000020971	RAD54L2	98	59.249	Gopherus_agassizii
ENSXMAG00000019370	-	95	57.790	ENSGGOG00000010032	RAD54L2	97	57.309	Gorilla_gorilla
ENSXMAG00000019370	-	97	59.812	ENSHBUG00000012480	rad54l2	96	59.133	Haplochromis_burtoni
ENSXMAG00000019370	-	100	79.290	ENSHBUG00000018930	-	100	79.102	Haplochromis_burtoni
ENSXMAG00000019370	-	93	58.345	ENSHGLG00000012116	RAD54L2	94	57.851	Heterocephalus_glaber_female
ENSXMAG00000019370	-	93	58.345	ENSHGLG00100007205	RAD54L2	94	57.851	Heterocephalus_glaber_male
ENSXMAG00000019370	-	99	72.192	ENSHCOG00000006741	-	97	72.378	Hippocampus_comes
ENSXMAG00000019370	-	97	58.911	ENSHCOG00000007601	rad54l2	95	57.757	Hippocampus_comes
ENSXMAG00000019370	-	96	58.766	ENSIPUG00000024973	-	96	59.897	Ictalurus_punctatus
ENSXMAG00000019370	-	94	58.887	ENSIPUG00000019664	rad54l2	96	56.744	Ictalurus_punctatus
ENSXMAG00000019370	-	93	58.275	ENSSTOG00000010014	RAD54L2	97	56.409	Ictidomys_tridecemlineatus
ENSXMAG00000019370	-	93	58.761	ENSJJAG00000014332	Rad54l2	94	58.193	Jaculus_jaculus
ENSXMAG00000019370	-	98	58.024	ENSKMAG00000001976	rad54l2	94	60.133	Kryptolebias_marmoratus
ENSXMAG00000019370	-	99	82.627	ENSKMAG00000002931	-	98	82.785	Kryptolebias_marmoratus
ENSXMAG00000019370	-	86	77.994	ENSLBEG00000008534	-	100	77.372	Labrus_bergylta
ENSXMAG00000019370	-	94	60.737	ENSLBEG00000018779	rad54l2	96	58.595	Labrus_bergylta
ENSXMAG00000019370	-	99	56.366	ENSLACG00000016004	RAD54L2	97	56.735	Latimeria_chalumnae
ENSXMAG00000019370	-	72	72.248	ENSLOCG00000014222	rad54l2	99	72.207	Lepisosteus_oculatus
ENSXMAG00000019370	-	93	59.185	ENSLAFG00000005966	RAD54L2	97	56.580	Loxodonta_africana
ENSXMAG00000019370	-	93	58.964	ENSMFAG00000041836	RAD54L2	95	58.328	Macaca_fascicularis
ENSXMAG00000019370	-	93	58.836	ENSMMUG00000012002	RAD54L2	94	58.339	Macaca_mulatta
ENSXMAG00000019370	-	93	58.824	ENSMNEG00000035063	RAD54L2	96	58.328	Macaca_nemestrina
ENSXMAG00000019370	-	93	58.964	ENSMLEG00000034668	RAD54L2	95	58.328	Mandrillus_leucophaeus
ENSXMAG00000019370	-	100	77.778	ENSMAMG00000015321	-	100	77.508	Mastacembelus_armatus
ENSXMAG00000019370	-	90	69.794	ENSMAMG00000023761	rad54l2	95	66.639	Mastacembelus_armatus
ENSXMAG00000019370	-	97	59.852	ENSMZEG00005012584	rad54l2	96	59.889	Maylandia_zebra
ENSXMAG00000019370	-	100	79.290	ENSMZEG00005021308	-	100	78.969	Maylandia_zebra
ENSXMAG00000019370	-	95	60.864	ENSMGAG00000002911	RAD54L2	97	58.073	Meleagris_gallopavo
ENSXMAG00000019370	-	71	67.763	ENSMAUG00000011651	Rad54l2	98	65.489	Mesocricetus_auratus
ENSXMAG00000019370	-	97	57.898	ENSMICG00000002777	RAD54L2	94	58.645	Microcebus_murinus
ENSXMAG00000019370	-	94	58.258	ENSMOCG00000022448	Rad54l2	96	57.703	Microtus_ochrogaster
ENSXMAG00000019370	-	94	75.897	ENSMMOG00000016901	-	99	75.108	Mola_mola
ENSXMAG00000019370	-	94	59.786	ENSMMOG00000021709	rad54l2	92	60.696	Mola_mola
ENSXMAG00000019370	-	89	62.602	ENSMODG00000011850	RAD54L2	94	61.985	Monodelphis_domestica
ENSXMAG00000019370	-	87	76.271	ENSMALG00000015084	-	97	82.274	Monopterus_albus
ENSXMAG00000019370	-	93	58.473	MGP_CAROLIEiJ_G0032634	Rad54l2	94	57.840	Mus_caroli
ENSXMAG00000019370	-	93	58.333	ENSMUSG00000040661	Rad54l2	94	57.840	Mus_musculus
ENSXMAG00000019370	-	93	58.053	MGP_PahariEiJ_G0015502	Rad54l2	94	57.561	Mus_pahari
ENSXMAG00000019370	-	93	58.514	MGP_SPRETEiJ_G0033779	Rad54l2	94	57.880	Mus_spretus
ENSXMAG00000019370	-	93	58.456	ENSMPUG00000011865	RAD54L2	94	57.961	Mustela_putorius_furo
ENSXMAG00000019370	-	93	58.935	ENSMLUG00000004605	RAD54L2	94	58.438	Myotis_lucifugus
ENSXMAG00000019370	-	93	58.976	ENSNGAG00000015629	Rad54l2	94	58.409	Nannospalax_galili
ENSXMAG00000019370	-	100	79.290	ENSNBRG00000022847	-	100	78.820	Neolamprologus_brichardi
ENSXMAG00000019370	-	94	60.669	ENSNBRG00000001937	rad54l2	88	64.173	Neolamprologus_brichardi
ENSXMAG00000019370	-	91	59.726	ENSNLEG00000007038	RAD54L2	93	59.068	Nomascus_leucogenys
ENSXMAG00000019370	-	90	71.823	ENSMEUG00000009835	RAD54L2	93	70.417	Notamacropus_eugenii
ENSXMAG00000019370	-	93	58.275	ENSODEG00000018266	RAD54L2	94	57.781	Octodon_degus
ENSXMAG00000019370	-	96	79.930	ENSONIG00000001663	-	98	79.373	Oreochromis_niloticus
ENSXMAG00000019370	-	97	60.870	ENSONIG00000014468	rad54l2	96	60.194	Oreochromis_niloticus
ENSXMAG00000019370	-	95	60.248	ENSOANG00000012793	RAD54L2	94	60.953	Ornithorhynchus_anatinus
ENSXMAG00000019370	-	94	58.298	ENSOCUG00000017577	RAD54L2	96	56.949	Oryctolagus_cuniculus
ENSXMAG00000019370	-	97	58.783	ENSORLG00000002276	rad54l2	97	57.799	Oryzias_latipes
ENSXMAG00000019370	-	99	76.965	ENSORLG00000002714	-	99	76.506	Oryzias_latipes
ENSXMAG00000019370	-	97	59.274	ENSORLG00020003470	rad54l2	97	58.160	Oryzias_latipes_hni
ENSXMAG00000019370	-	99	76.762	ENSORLG00020019256	-	99	76.558	Oryzias_latipes_hni
ENSXMAG00000019370	-	97	59.234	ENSORLG00015021530	rad54l2	96	58.108	Oryzias_latipes_hsok
ENSXMAG00000019370	-	99	77.329	ENSORLG00015013408	-	99	76.971	Oryzias_latipes_hsok
ENSXMAG00000019370	-	97	59.604	ENSOMEG00000005597	rad54l2	94	59.013	Oryzias_melastigma
ENSXMAG00000019370	-	99	75.848	ENSOMEG00000008216	-	99	75.068	Oryzias_melastigma
ENSXMAG00000019370	-	76	61.135	ENSOGAG00000012442	RAD54L2	97	60.551	Otolemur_garnettii
ENSXMAG00000019370	-	93	58.667	ENSOARG00000007264	RAD54L2	97	56.656	Ovis_aries
ENSXMAG00000019370	-	91	59.582	ENSPPAG00000038472	RAD54L2	97	57.377	Pan_paniscus
ENSXMAG00000019370	-	93	58.567	ENSPPRG00000010212	RAD54L2	94	58.101	Panthera_pardus
ENSXMAG00000019370	-	93	58.567	ENSPTIG00000002240	RAD54L2	94	58.101	Panthera_tigris_altaica
ENSXMAG00000019370	-	91	59.582	ENSPTRG00000014974	RAD54L2	97	57.377	Pan_troglodytes
ENSXMAG00000019370	-	93	58.964	ENSPANG00000000857	RAD54L2	95	58.328	Papio_anubis
ENSXMAG00000019370	-	100	65.168	ENSPKIG00000001065	rad54l2	98	66.574	Paramormyrops_kingsleyae
ENSXMAG00000019370	-	69	69.826	ENSPSIG00000014346	RAD54L2	99	65.722	Pelodiscus_sinensis
ENSXMAG00000019370	-	85	62.609	ENSPMGG00000002208	rad54l2	96	63.772	Periophthalmus_magnuspinnatus
ENSXMAG00000019370	-	95	68.253	ENSPMGG00000000641	-	97	68.208	Periophthalmus_magnuspinnatus
ENSXMAG00000019370	-	93	58.316	ENSPEMG00000012051	Rad54l2	94	57.891	Peromyscus_maniculatus_bairdii
ENSXMAG00000019370	-	89	61.795	ENSPCIG00000018143	RAD54L2	91	63.709	Phascolarctos_cinereus
ENSXMAG00000019370	-	94	62.020	ENSPFOG00000018644	rad54l2	96	58.931	Poecilia_formosa
ENSXMAG00000019370	-	100	96.453	ENSPFOG00000000197	-	100	96.453	Poecilia_formosa
ENSXMAG00000019370	-	100	95.978	ENSPLAG00000013908	-	100	95.978	Poecilia_latipinna
ENSXMAG00000019370	-	94	62.030	ENSPLAG00000006015	rad54l2	95	59.315	Poecilia_latipinna
ENSXMAG00000019370	-	94	62.162	ENSPMEG00000021535	rad54l2	96	59.269	Poecilia_mexicana
ENSXMAG00000019370	-	100	96.180	ENSPMEG00000009878	-	100	96.180	Poecilia_mexicana
ENSXMAG00000019370	-	94	61.352	ENSPREG00000008628	rad54l2	97	61.504	Poecilia_reticulata
ENSXMAG00000019370	-	100	95.235	ENSPREG00000013377	RAD54L2	100	95.916	Poecilia_reticulata
ENSXMAG00000019370	-	91	59.798	ENSPPYG00000013831	RAD54L2	95	59.140	Pongo_abelii
ENSXMAG00000019370	-	74	60.700	ENSPCAG00000011952	RAD54L2	80	60.700	Procavia_capensis
ENSXMAG00000019370	-	97	57.784	ENSPCOG00000015983	RAD54L2	92	58.545	Propithecus_coquereli
ENSXMAG00000019370	-	94	60.717	ENSPNYG00000020693	rad54l2	93	61.338	Pundamilia_nyererei
ENSXMAG00000019370	-	100	79.290	ENSPNYG00000011435	-	100	78.969	Pundamilia_nyererei
ENSXMAG00000019370	-	94	61.533	ENSPNAG00000006451	rad54l2	96	61.003	Pygocentrus_nattereri
ENSXMAG00000019370	-	100	63.215	ENSPNAG00000011583	-	97	64.941	Pygocentrus_nattereri
ENSXMAG00000019370	-	93	55.330	ENSRNOG00000013570	Rad54l2	94	54.807	Rattus_norvegicus
ENSXMAG00000019370	-	70	66.475	ENSRNOG00000049489	LOC102552166	94	65.994	Rattus_norvegicus
ENSXMAG00000019370	-	93	58.555	ENSRBIG00000032434	RAD54L2	97	57.491	Rhinopithecus_bieti
ENSXMAG00000019370	-	91	59.510	ENSRROG00000042309	RAD54L2	93	58.996	Rhinopithecus_roxellana
ENSXMAG00000019370	-	93	58.415	ENSSBOG00000002139	RAD54L2	94	57.920	Saimiri_boliviensis_boliviensis
ENSXMAG00000019370	-	95	61.045	ENSSHAG00000008604	RAD54L2	96	59.750	Sarcophilus_harrisii
ENSXMAG00000019370	-	100	67.428	ENSSFOG00015019014	rad54l2	98	67.033	Scleropages_formosus
ENSXMAG00000019370	-	94	59.788	ENSSMAG00000020933	rad54l2	96	57.648	Scophthalmus_maximus
ENSXMAG00000019370	-	100	75.971	ENSSMAG00000009978	-	100	75.774	Scophthalmus_maximus
ENSXMAG00000019370	-	99	59.025	ENSSDUG00000014268	rad54l2	96	59.614	Seriola_dumerili
ENSXMAG00000019370	-	100	80.054	ENSSDUG00000016711	-	98	80.205	Seriola_dumerili
ENSXMAG00000019370	-	96	78.112	ENSSLDG00000023388	-	99	77.692	Seriola_lalandi_dorsalis
ENSXMAG00000019370	-	94	61.029	ENSSLDG00000023959	rad54l2	97	62.445	Seriola_lalandi_dorsalis
ENSXMAG00000019370	-	97	59.627	ENSSPAG00000016532	rad54l2	95	60.508	Stegastes_partitus
ENSXMAG00000019370	-	93	81.377	ENSSPAG00000006371	-	98	81.422	Stegastes_partitus
ENSXMAG00000019370	-	97	57.695	ENSSSCG00000011425	RAD54L2	94	57.770	Sus_scrofa
ENSXMAG00000019370	-	95	60.779	ENSTGUG00000004888	RAD54L2	97	58.084	Taeniopygia_guttata
ENSXMAG00000019370	-	94	61.177	ENSTRUG00000013962	rad54l2	97	58.919	Takifugu_rubripes
ENSXMAG00000019370	-	100	73.801	ENSTRUG00000011066	-	100	73.531	Takifugu_rubripes
ENSXMAG00000019370	-	74	69.656	ENSTNIG00000014694	rad54l2	99	67.410	Tetraodon_nigroviridis
ENSXMAG00000019370	-	76	75.893	ENSTNIG00000006049	-	100	75.536	Tetraodon_nigroviridis
ENSXMAG00000019370	-	85	59.038	ENSTBEG00000003377	RAD54L2	96	59.373	Tupaia_belangeri
ENSXMAG00000019370	-	91	59.654	ENSUAMG00000020891	RAD54L2	97	57.684	Ursus_americanus
ENSXMAG00000019370	-	91	59.870	ENSUMAG00000021678	RAD54L2	94	58.239	Ursus_maritimus
ENSXMAG00000019370	-	93	58.526	ENSVVUG00000026874	RAD54L2	97	57.891	Vulpes_vulpes
ENSXMAG00000019370	-	95	60.042	ENSXETG00000000070	rad54l2	87	63.911	Xenopus_tropicalis
ENSXMAG00000019370	-	94	57.993	ENSXCOG00000004961	rad54l2	89	60.031	Xiphophorus_couchianus
ENSXMAG00000019370	-	96	92.346	ENSXCOG00000002848	-	100	92.346	Xiphophorus_couchianus
ENSXMAG00000019370	-	94	61.064	ENSXMAG00000017182	rad54l2	97	61.424	Xiphophorus_maculatus