EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000019386 (Gene tree)
Gene ID: 102219307
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11818 bases
Position: chr1:8338538-8350355
Accession: 102219307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000019433	B3_4	PF03483.17	2.5e-07	1	1
ENSXMAP00000029919	B3_4	PF03483.17	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000019461	-	1660	-	ENSXMAP00000019433	521 (aa)	-	M4AY88
ENSXMAT00000024844	-	1750	XM_014469156	ENSXMAP00000029919	551 (aa)	XP_014324642	-

Gene Model

Click here to download ENSXMAG00000019386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000019386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000019386	lrrc47	99	55.208	ENSG00000130764	LRRC47	99	54.783	Homo_sapiens
ENSXMAG00000019386	lrrc47	100	80.396	ENSAPOG00000019553	lrrc47	99	78.777	Acanthochromis_polyacanthus
ENSXMAG00000019386	lrrc47	76	57.506	ENSAMEG00000009152	LRRC47	94	57.506	Ailuropoda_melanoleuca
ENSXMAG00000019386	lrrc47	68	62.434	ENSAPLG00000003167	LRRC47	99	62.434	Anas_platyrhynchos
ENSXMAG00000019386	lrrc47	67	61.126	ENSACAG00000008267	LRRC47	100	61.126	Anolis_carolinensis
ENSXMAG00000019386	lrrc47	99	54.435	ENSANAG00000025576	LRRC47	99	54.435	Aotus_nancymaae
ENSXMAG00000019386	lrrc47	99	55.070	ENSBTAG00000004738	LRRC47	98	55.070	Bos_taurus
ENSXMAG00000019386	lrrc47	99	54.530	ENSCAFG00000019492	LRRC47	97	54.704	Canis_familiaris
ENSXMAG00000019386	lrrc47	99	54.720	ENSCAFG00020009667	LRRC47	99	54.895	Canis_lupus_dingo
ENSXMAG00000019386	lrrc47	99	55.789	ENSCHIG00000022607	LRRC47	98	55.965	Capra_hircus
ENSXMAG00000019386	lrrc47	96	54.234	ENSTSYG00000009326	LRRC47	97	55.263	Carlito_syrichta
ENSXMAG00000019386	lrrc47	66	59.358	ENSCAPG00000016517	LRRC47	99	59.200	Cavia_aperea
ENSXMAG00000019386	lrrc47	99	54.044	ENSCPOG00000014931	LRRC47	95	53.927	Cavia_porcellus
ENSXMAG00000019386	lrrc47	99	54.087	ENSCCAG00000024895	LRRC47	99	54.087	Cebus_capucinus
ENSXMAG00000019386	lrrc47	99	54.766	ENSCATG00000029337	LRRC47	99	54.783	Cercocebus_atys
ENSXMAG00000019386	lrrc47	99	54.386	ENSCLAG00000006093	LRRC47	99	54.211	Chinchilla_lanigera
ENSXMAG00000019386	lrrc47	99	54.939	ENSCSAG00000000727	LRRC47	99	54.957	Chlorocebus_sabaeus
ENSXMAG00000019386	lrrc47	99	51.174	ENSCPBG00000019404	LRRC47	98	51.342	Chrysemys_picta_bellii
ENSXMAG00000019386	lrrc47	80	55.652	ENSCANG00000030701	LRRC47	96	55.677	Colobus_angolensis_palliatus
ENSXMAG00000019386	lrrc47	98	55.747	ENSCGRG00001015159	Lrrc47	89	54.545	Cricetulus_griseus_chok1gshd
ENSXMAG00000019386	lrrc47	68	59.115	ENSCGRG00000017336	Lrrc47	99	59.893	Cricetulus_griseus_crigri
ENSXMAG00000019386	lrrc47	100	74.595	ENSCSEG00000006217	lrrc47	96	73.741	Cynoglossus_semilaevis
ENSXMAG00000019386	lrrc47	66	59.309	ENSDORG00000016594	Lrrc47	99	59.574	Dipodomys_ordii
ENSXMAG00000019386	lrrc47	99	56.309	ENSEASG00005021788	LRRC47	99	56.000	Equus_asinus_asinus
ENSXMAG00000019386	lrrc47	99	56.174	ENSECAG00000022472	LRRC47	89	56.174	Equus_caballus
ENSXMAG00000019386	lrrc47	99	67.851	ENSELUG00000017544	lrrc47	97	68.028	Esox_lucius
ENSXMAG00000019386	lrrc47	99	53.309	ENSFCAG00000011632	LRRC47	96	53.309	Felis_catus
ENSXMAG00000019386	lrrc47	71	62.211	ENSFALG00000009631	LRRC47	98	58.352	Ficedula_albicollis
ENSXMAG00000019386	lrrc47	100	65.536	ENSGMOG00000015674	lrrc47	99	65.536	Gadus_morhua
ENSXMAG00000019386	lrrc47	99	52.389	ENSGALG00000050995	LRRC47	99	52.566	Gallus_gallus
ENSXMAG00000019386	lrrc47	100	72.842	ENSGACG00000005550	lrrc47	99	73.022	Gasterosteus_aculeatus
ENSXMAG00000019386	lrrc47	99	51.020	ENSGAGG00000022584	LRRC47	98	52.381	Gopherus_agassizii
ENSXMAG00000019386	lrrc47	99	55.382	ENSGGOG00000015571	LRRC47	99	54.957	Gorilla_gorilla
ENSXMAG00000019386	lrrc47	99	53.403	ENSHGLG00000018278	LRRC47	95	53.403	Heterocephalus_glaber_female
ENSXMAG00000019386	lrrc47	71	57.606	ENSHGLG00100008507	LRRC47	99	58.105	Heterocephalus_glaber_male
ENSXMAG00000019386	lrrc47	99	75.228	ENSHCOG00000006348	lrrc47	96	75.228	Hippocampus_comes
ENSXMAG00000019386	lrrc47	99	55.088	ENSSTOG00000027559	LRRC47	99	55.088	Ictidomys_tridecemlineatus
ENSXMAG00000019386	lrrc47	99	55.846	ENSJJAG00000017474	Lrrc47	96	55.846	Jaculus_jaculus
ENSXMAG00000019386	lrrc47	100	79.496	ENSKMAG00000003414	lrrc47	99	79.496	Kryptolebias_marmoratus
ENSXMAG00000019386	lrrc47	99	56.140	ENSLAFG00000011657	LRRC47	98	56.348	Loxodonta_africana
ENSXMAG00000019386	lrrc47	99	44.021	ENSMFAG00000045730	LRRC47	88	55.696	Macaca_fascicularis
ENSXMAG00000019386	lrrc47	99	55.172	ENSMNEG00000042488	LRRC47	98	54.957	Macaca_nemestrina
ENSXMAG00000019386	lrrc47	78	55.902	ENSMLEG00000043735	LRRC47	90	55.928	Mandrillus_leucophaeus
ENSXMAG00000019386	lrrc47	99	55.009	ENSMAUG00000021337	Lrrc47	97	55.088	Mesocricetus_auratus
ENSXMAG00000019386	lrrc47	99	55.393	ENSMICG00000026816	LRRC47	99	55.979	Microcebus_murinus
ENSXMAG00000019386	lrrc47	99	55.142	ENSMOCG00000021279	Lrrc47	99	55.221	Microtus_ochrogaster
ENSXMAG00000019386	lrrc47	99	77.117	ENSMMOG00000017007	lrrc47	99	76.396	Mola_mola
ENSXMAG00000019386	lrrc47	99	46.235	ENSMODG00000006554	LRRC47	98	54.466	Monodelphis_domestica
ENSXMAG00000019386	lrrc47	99	55.672	MGP_CAROLIEiJ_G0026864	Lrrc47	98	54.895	Mus_caroli
ENSXMAG00000019386	lrrc47	99	55.672	ENSMUSG00000029028	Lrrc47	98	54.895	Mus_musculus
ENSXMAG00000019386	lrrc47	98	55.615	MGP_PahariEiJ_G0029212	Lrrc47	97	55.595	Mus_pahari
ENSXMAG00000019386	lrrc47	99	55.497	MGP_SPRETEiJ_G0027857	Lrrc47	98	54.720	Mus_spretus
ENSXMAG00000019386	lrrc47	66	59.682	ENSMPUG00000007321	LRRC47	75	59.947	Mustela_putorius_furo
ENSXMAG00000019386	lrrc47	99	55.732	ENSNGAG00000022153	Lrrc47	98	55.692	Nannospalax_galili
ENSXMAG00000019386	lrrc47	99	54.101	ENSNLEG00000008131	LRRC47	99	54.450	Nomascus_leucogenys
ENSXMAG00000019386	lrrc47	84	53.909	ENSODEG00000010882	LRRC47	93	54.321	Octodon_degus
ENSXMAG00000019386	lrrc47	99	75.908	ENSORLG00000002532	lrrc47	99	76.592	Oryzias_latipes
ENSXMAG00000019386	lrrc47	99	76.673	ENSORLG00020019601	lrrc47	99	77.215	Oryzias_latipes_hni
ENSXMAG00000019386	lrrc47	99	75.949	ENSORLG00015014040	lrrc47	99	76.492	Oryzias_latipes_hsok
ENSXMAG00000019386	lrrc47	99	78.286	ENSOMEG00000008989	lrrc47	99	77.477	Oryzias_melastigma
ENSXMAG00000019386	lrrc47	99	55.130	ENSOGAG00000001553	LRRC47	99	55.130	Otolemur_garnettii
ENSXMAG00000019386	lrrc47	99	53.671	ENSOARG00000015290	LRRC47	98	53.846	Ovis_aries
ENSXMAG00000019386	lrrc47	75	58.879	ENSPPAG00000036370	-	98	58.314	Pan_paniscus
ENSXMAG00000019386	lrrc47	99	53.833	ENSPPRG00000005261	LRRC47	98	54.007	Panthera_pardus
ENSXMAG00000019386	lrrc47	99	55.208	ENSPTRG00000000068	LRRC47	99	54.783	Pan_troglodytes
ENSXMAG00000019386	lrrc47	99	54.939	ENSPANG00000012437	LRRC47	99	54.957	Papio_anubis
ENSXMAG00000019386	lrrc47	66	62.865	ENSPSIG00000004196	LRRC47	99	62.069	Pelodiscus_sinensis
ENSXMAG00000019386	lrrc47	66	60.753	ENSPEMG00000021068	Lrrc47	99	60.963	Peromyscus_maniculatus_bairdii
ENSXMAG00000019386	lrrc47	99	55.536	ENSPCIG00000003638	LRRC47	98	56.392	Phascolarctos_cinereus
ENSXMAG00000019386	lrrc47	99	96.923	ENSPFOG00000000992	lrrc47	94	96.923	Poecilia_formosa
ENSXMAG00000019386	lrrc47	100	96.737	ENSPLAG00000008077	lrrc47	99	96.733	Poecilia_latipinna
ENSXMAG00000019386	lrrc47	100	96.750	ENSPMEG00000007367	lrrc47	99	96.745	Poecilia_mexicana
ENSXMAG00000019386	lrrc47	99	55.210	ENSPPYG00000001960	LRRC47	99	54.783	Pongo_abelii
ENSXMAG00000019386	lrrc47	99	55.210	ENSPCOG00000019161	LRRC47	98	55.575	Propithecus_coquereli
ENSXMAG00000019386	lrrc47	99	55.517	ENSPVAG00000009839	LRRC47	98	55.692	Pteropus_vampyrus
ENSXMAG00000019386	lrrc47	99	65.333	ENSPNAG00000017982	lrrc47	98	65.162	Pygocentrus_nattereri
ENSXMAG00000019386	lrrc47	99	54.466	ENSRNOG00000024796	Lrrc47	98	54.545	Rattus_norvegicus
ENSXMAG00000019386	lrrc47	99	54.939	ENSRBIG00000019437	LRRC47	99	54.957	Rhinopithecus_bieti
ENSXMAG00000019386	lrrc47	99	54.939	ENSRROG00000043182	LRRC47	99	54.957	Rhinopithecus_roxellana
ENSXMAG00000019386	lrrc47	79	56.858	ENSSBOG00000026334	LRRC47	92	56.858	Saimiri_boliviensis_boliviensis
ENSXMAG00000019386	lrrc47	99	49.391	ENSSHAG00000007360	LRRC47	98	50.777	Sarcophilus_harrisii
ENSXMAG00000019386	lrrc47	100	77.917	ENSSMAG00000009344	lrrc47	99	76.661	Scophthalmus_maximus
ENSXMAG00000019386	lrrc47	100	79.856	ENSSDUG00000014618	lrrc47	99	80.935	Seriola_dumerili
ENSXMAG00000019386	lrrc47	100	79.496	ENSSLDG00000018908	lrrc47	99	80.576	Seriola_lalandi_dorsalis
ENSXMAG00000019386	lrrc47	99	51.635	ENSSPUG00000010277	LRRC47	98	52.151	Sphenodon_punctatus
ENSXMAG00000019386	lrrc47	100	79.137	ENSSPAG00000005188	lrrc47	99	79.137	Stegastes_partitus
ENSXMAG00000019386	lrrc47	99	55.052	ENSSSCG00000039516	LRRC47	98	55.323	Sus_scrofa
ENSXMAG00000019386	lrrc47	72	60.804	ENSTGUG00000002737	LRRC47	99	60.804	Taeniopygia_guttata
ENSXMAG00000019386	lrrc47	99	75.636	ENSTRUG00000017696	lrrc47	99	75.636	Takifugu_rubripes
ENSXMAG00000019386	lrrc47	99	75.636	ENSTNIG00000010923	lrrc47	99	75.636	Tetraodon_nigroviridis
ENSXMAG00000019386	lrrc47	99	54.261	ENSTTRG00000011751	LRRC47	99	54.435	Tursiops_truncatus
ENSXMAG00000019386	lrrc47	90	54.826	ENSUAMG00000012080	LRRC47	98	55.019	Ursus_americanus
ENSXMAG00000019386	lrrc47	67	59.474	ENSUMAG00000010781	LRRC47	81	59.737	Ursus_maritimus
ENSXMAG00000019386	lrrc47	99	51.034	ENSVVUG00000027118	LRRC47	93	52.364	Vulpes_vulpes
ENSXMAG00000019386	lrrc47	99	59.358	ENSXETG00000006029	lrrc47	98	59.358	Xenopus_tropicalis
ENSXMAG00000019386	lrrc47	99	98.905	ENSXCOG00000002813	lrrc47	98	98.905	Xiphophorus_couchianus